>ref|XM_642264.1| Dictyostelium discoideum hypothetical protein (DDB0189592), partial
            mRNA
          Length = 3192

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 82   tactactaataatagcaccacct 104
            |||||||||||||||||||||||
Sbjct: 2808 tactactaataatagcaccacct 2830

>gb|AC079352.5| Homo sapiens BAC clone RP11-915C24 from 2, complete sequence
          Length = 158180

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 62     aattccagtcaaaatttcagta 83
              ||||||||||||||||||||||
Sbjct: 148557 aattccagtcaaaatttcagta 148578

>emb|AL136962.19| Human DNA sequence from clone RP11-273F15 on chromosome 13 Contains a
              pseudogene similar to part of NADH dehydrogenase 3 (NADH
              dehydrogenase, subunit 3 (complex I)) (MTND3) and a
              non-metastatic cells 1, protein (NM23A) expressed in
              (NME1)(NM23, NM23-H1) pseudogene, complete sequence
          Length = 165655

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 381    attgtacagcaatcaatacatcaga 405
              ||||||||||||| |||||||||||
Sbjct: 138790 attgtacagcaatgaatacatcaga 138766

>gb|AC013473.8| Homo sapiens BAC clone RP11-504G5 from 2, complete sequence
          Length = 170781

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 61     gaattccagtcaaaatttcag 81
              |||||||||||||||||||||
Sbjct: 151617 gaattccagtcaaaatttcag 151637

>emb|BX004964.9| Zebrafish DNA sequence from clone DKEY-7I4, complete sequence
          Length = 211018

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 92     aatagcaccacctaggggaataatgaaca 120
              ||||||||||||||| |||| ||||||||
Sbjct: 179104 aatagcaccacctagtggaacaatgaaca 179076

>gb|AC144849.2| Mus musculus BAC clone RP24-482B19 from chromosome Y, complete
            sequence
          Length = 184015

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 268  aaaacaacagacctccaaaaaatt 291
            ||||||||||||||| ||||||||
Sbjct: 3351 aaaacaacagacctctaaaaaatt 3374

>gb|AF546992.1| Acorus gramineus NADH dehydrogenase subunit F (ndhF) gene, partial
            cds; chloroplast
          Length = 2089

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 70   tcaaaatttcagtactactaataatagc 97
            |||||||||||||| |||||| ||||||
Sbjct: 1363 tcaaaatttcagtagtactaaaaatagc 1390

>emb|AL590652.10| Human DNA sequence from clone RP11-79N23 on chromosome 6 Contains a
             novel gene, complete sequence
          Length = 111616

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    cagtactactaataatagca 98
             ||||||||||||||||||||
Sbjct: 28748 cagtactactaataatagca 28729

>emb|AL031595.4|HS671O14 Human DNA sequence from clone RP4-671O14 on chromosome 22q13.2-13.33,
             complete sequence
          Length = 102739

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    aattccagtcaaaatttcag 81
             ||||||||||||||||||||
Sbjct: 63406 aattccagtcaaaatttcag 63387

>emb|BX571852.20| Zebrafish DNA sequence from clone DKEY-175N6 in linkage group 10,
             complete sequence
          Length = 178333

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 267   caaaacaacagacctccaaaaaat 290
             |||||||||||||| |||||||||
Sbjct: 32742 caaaacaacagaccaccaaaaaat 32765

>gb|AY007647.2| Acorus calamus NADH dehydrogenase subunit F (ndhF) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 2078

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 70   tcaaaatttcagtactactaataatagc 97
            |||||||||||||| |||||| ||||||
Sbjct: 1358 tcaaaatttcagtagtactaaaaatagc 1385

>gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H10 map CIC11C08, complete
             sequence
          Length = 96066

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    tttcagtactactaataata 95
             ||||||||||||||||||||
Sbjct: 75259 tttcagtactactaataata 75278

>gb|AC067849.6| Homo sapiens chromosome 8, clone RP11-709L14, complete sequence
          Length = 169453

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 375    atgcaaattgtacagcaatcaata 398
              |||| |||||||||||||||||||
Sbjct: 146630 atgccaattgtacagcaatcaata 146607

>gb|AC011179.9| Homo sapiens, clone RP11-11N24, complete sequence
          Length = 153472

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 375   atgcaaattgtacagcaatcaata 398
             |||| |||||||||||||||||||
Sbjct: 56222 atgccaattgtacagcaatcaata 56245

>gb|AC182111.1| Mus musculus BAC clone RP24-415L2 from chromosome y, complete sequence
          Length = 162320

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 268   aaaacaacagacctccaaaaaatt 291
             ||||||||||||||| ||||||||
Sbjct: 21643 aaaacaacagacctctaaaaaatt 21666

>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14
          Length = 1279711

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 24     tacatattgtgcatgcgagaataa 47
              ||||||||||||||| ||||||||
Sbjct: 636462 tacatattgtgcatgtgagaataa 636439

>gb|AC163707.3| Gallus gallus BAC clone CH261-71N11 from chromosome ul, complete
             sequence
          Length = 174599

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   aaaacaacagacctccaaaa 287
             ||||||||||||||||||||
Sbjct: 82621 aaaacaacagacctccaaaa 82602

>gb|AC149597.4| Mus musculus BAC clone RP24-90B12 from Y, complete sequence
          Length = 198224

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 268   aaaacaacagacctccaaaaaatt 291
             ||||||||||||||| ||||||||
Sbjct: 13002 aaaacaacagacctctaaaaaatt 12979

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 70     tcaaaatttcagtactactaataatagc 97
              |||||||||||||| |||||| ||||||
Sbjct: 110864 tcaaaatttcagtagtactaaaaatagc 110837

>gb|AC165336.4| Mus musculus BAC clone RP24-470O8 from chromosome y, complete sequence
          Length = 153266

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 268   aaaacaacagacctccaaaaaatt 291
             ||||||||||||||| ||||||||
Sbjct: 50297 aaaacaacagacctctaaaaaatt 50320

>dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region,
             complete sequence, 4 of 5
          Length = 200000

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    tacatattgtgcatgcgagaataa 47
             ||||||||||||||| ||||||||
Sbjct: 36462 tacatattgtgcatgtgagaataa 36439


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,613,297
Number of Sequences: 3902068
Number of extensions: 3613297
Number of successful extensions: 65935
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65891
Number of HSP's gapped (non-prelim): 44
length of query: 415
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 393
effective length of database: 17,147,199,772
effective search space: 6738849510396
effective search space used: 6738849510396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)