ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl50c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191458.1| Oryza sativa (japonica cultivar-group), predic... 74 4e-10
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
3dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
4dbj|AK102133.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
5emb|AL445523.11| Human DNA sequence from clone RP11-231N9 on chr... 44 0.40
6gb|AC096728.3| Homo sapiens BAC clone RP11-53C16 from 4, complet... 44 0.40
7gb|CP000081.1| Leishmania major chromosome 35, complete sequence 42 1.6
8gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 42 1.6
9ref|XR_001568.1| PREDICTED: Mus musculus hypothetical gene suppo... 42 1.6
10ref|XR_004510.1| PREDICTED: Mus musculus hypothetical gene suppo... 42 1.6
11ref|XR_002315.1| PREDICTED: Mus musculus hypothetical gene suppo... 42 1.6
12gb|AC116106.18| Mus musculus chromosome 16, clone RP23-23D5, com... 42 1.6
13gb|AC129602.3| Mus musculus BAC clone RP23-37L24 from 16, comple... 42 1.6
14gb|AC154683.2| Mus musculus BAC clone RP23-142O4 from chromosome... 42 1.6
15gb|AC097530.3| Homo sapiens BAC clone RP11-696N14 from 4, comple... 42 1.6
16emb|BX511060.7| Zebrafish DNA sequence from clone CH211-210L19 i... 42 1.6
17dbj|AK047219.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 42 1.6
18gb|AC005234.1| Homo sapiens BAC clone RP11-436H22 from 2, comple... 42 1.6
19gb|AC066688.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 1.6
20gb|AC144798.4| Mus musculus BAC clone RP24-364A24 from 14, compl... 42 1.6
21dbj|AP002027.1| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 42 1.6
22ref|XM_638969.1| Dictyostelium discoideum hypothetical protein (... 40 6.2
23gb|AC005202.1| Homo sapiens chromosome 16, cosmid clone RT290 (L... 40 6.2
24gb|AC110501.26| Mus musculus chromosome 9, clone RP24-448H20, co... 40 6.2
25gb|AC147312.3| Pan troglodytes BAC clone RP43-50K12 from 7, comp... 40 6.2
26gb|AF216671.7| Homo sapiens chromosome 8 clone RP11-300I14 map q... 40 6.2
27gb|AC092033.4| Homo sapiens BAC clone RP11-794I22 from 7, comple... 40 6.2
28gb|AC004694.1| Homo sapiens BAC clone CTB-152H24 from 7, complet... 40 6.2
29gb|AC006010.2| Homo sapiens PAC clone RP5-865F17 from 7, complet... 40 6.2
30gb|AC147006.18| Medicago truncatula clone mth2-62m1, complete se... 40 6.2
31gb|AC153789.11| Mus musculus chromosome 8, clone RP23-466N7, com... 40 6.2
32emb|AL590622.7| Human DNA sequence from clone RP11-320F15 on chr... 40 6.2
33emb|AL445669.9| Human DNA sequence from clone RP11-163G10 on chr... 40 6.2
34emb|CR381576.10| Zebrafish DNA sequence from clone DKEY-245F17 i... 40 6.2
35emb|CR925752.5| Mouse DNA sequence from clone RP24-106O24 on chr... 40 6.2
36gb|AE006463.1| Homo sapiens 16p13.3 sequence section 2 of 8 40 6.2
37emb|BX088698.22| Mouse DNA sequence from clone RP23-309D15 on ch... 40 6.2
38emb|BX511016.5| Zebrafish DNA sequence from clone DKEY-181N13 in... 40 6.2
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
40gb|AC073433.9|AC073433 Arabidopsis thaliana chromosome 1 BAC F19... 40 6.2
41gb|AC117070.2| Dictyostelium discoideum chromosome 2 map 2097701... 40 6.2
42gb|AC104035.6| Homo sapiens chromosome 15, clone RP11-661P17, co... 40 6.2
43gb|AC174163.2| Gallus gallus BAC clone CH261-69O1 from chromosom... 40 6.2
44emb|CR937049.3| CH230-323M7, complete sequence 40 6.2
45gb|AC115809.8| Mus musculus chromosome 8, clone RP23-416L3, comp... 40 6.2
46gb|AF091216.1|AF091216 Mus musculus Wrn protein (Wrn) gene, comp... 40 6.2
47emb|BX004970.8| Zebrafish DNA sequence from clone DKEY-9I4, comp... 40 6.2
48emb|CT009706.20| Mouse DNA sequence from clone RP23-131H17 on ch... 40 6.2
49emb|Z98272.1|HS415C1 Human DNA sequence from clone LA16c-415C1 o... 40 6.2
50emb|AL672253.7| Mouse DNA sequence from clone RP23-13G19 on chro... 40 6.2
51gb|AC105258.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2 
>ref|NM_191458.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3837

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                        
Query: 329  ttccattggaataagcatccaatgtggaaaattgcccctctcctggcctgtgcagagcat 388
            |||||||||||||||||||||||||||||  |||||| |||| |  ||| |  |||||||
Sbjct: 3667 ttccattggaataagcatccaatgtggaattttgcccttctcttaacctataaagagcat 3608

                         
Query: 389  tcagcctgtcata 401
            |||||||||||||
Sbjct: 3607 tcagcctgtcata 3595
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                            
Query: 329      ttccattggaataagcatccaatgtggaaaattgcccctctcctggcctgtgcagagcat 388
                |||||||||||||||||||||||||||||  |||||| |||| |  ||| |  |||||||
Sbjct: 32767164 ttccattggaataagcatccaatgtggaattttgcccttctcttaacctataaagagcat 32767223

                             
Query: 389      tcagcctgtcata 401
                |||||||||||||
Sbjct: 32767224 tcagcctgtcata 32767236



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 157      tacaagcatcaccattgaccgttggcaaggcgataca 193
                |||| |||||||||||| ||||||||| |||||||||
Sbjct: 32766986 tacaggcatcaccattgcccgttggcatggcgataca 32767022
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>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0490D09
          Length = 154430

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                          
Query: 329    ttccattggaataagcatccaatgtggaaaattgcccctctcctggcctgtgcagagcat 388
              |||||||||||||||||||||||||||||  |||||| |||| |  ||| |  |||||||
Sbjct: 129959 ttccattggaataagcatccaatgtggaattttgcccttctcttaacctataaagagcat 130018

                           
Query: 389    tcagcctgtcata 401
              |||||||||||||
Sbjct: 130019 tcagcctgtcata 130031



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 157    tacaagcatcaccattgaccgttggcaaggcgataca 193
              |||| |||||||||||| ||||||||| |||||||||
Sbjct: 129781 tacaggcatcaccattgcccgttggcatggcgataca 129817
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>dbj|AK102133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085E13, full
            insert sequence
          Length = 4086

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                        
Query: 329  ttccattggaataagcatccaatgtggaaaattgcccctctcctggcctgtgcagagcat 388
            |||||||||||||||||||||||||||||  |||||| |||| |  ||| |  |||||||
Sbjct: 3745 ttccattggaataagcatccaatgtggaattttgcccttctcttaacctataaagagcat 3686

                         
Query: 389  tcagcctgtcata 401
            |||||||||||||
Sbjct: 3685 tcagcctgtcata 3673



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 157  tacaagcatcaccattgaccgttggcaaggcgataca 193
            |||| |||||||||||| ||||||||| |||||||||
Sbjct: 3923 tacaggcatcaccattgcccgttggcatggcgataca 3887
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>emb|AL445523.11| Human DNA sequence from clone RP11-231N9 on chromosome X Contains a
            karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
            (KPNA2) pseudogene and a chaperonin containing TCP1,
            subunit 4 (delta) (CCT4) pseudogene, complete sequence
          Length = 157946

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 56   cctttttcttctctccttttgg 77
            ||||||||||||||||||||||
Sbjct: 8666 cctttttcttctctccttttgg 8687
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>gb|AC096728.3| Homo sapiens BAC clone RP11-53C16 from 4, complete sequence
          Length = 82696

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 58    tttttcttctctccttttggaa 79
             ||||||||||||||||||||||
Sbjct: 66839 tttttcttctctccttttggaa 66818
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 60      tttcttctctccttttggaat 80
               |||||||||||||||||||||
Sbjct: 1191853 tttcttctctccttttggaat 1191833
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 55      tcctttttcttctctcctttt 75
               |||||||||||||||||||||
Sbjct: 3841334 tcctttttcttctctcctttt 3841314



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 55      tcctttttcttctctcctttt 75
               |||||||||||||||||||||
Sbjct: 3841320 tcctttttcttctctcctttt 3841300



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 55      tcctttttcttctctcctttt 75
               |||||||||||||||||||||
Sbjct: 3841280 tcctttttcttctctcctttt 3841260



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 55      tcctttttcttctctcctttt 75
               |||||||||||||||||||||
Sbjct: 3841266 tcctttttcttctctcctttt 3841246
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>ref|XR_001568.1| PREDICTED: Mus musculus hypothetical gene supported by AK047219
            (LOC432907), misc RNA
          Length = 2034

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 55   tcctttttcttctctcctttt 75
            |||||||||||||||||||||
Sbjct: 1740 tcctttttcttctctcctttt 1760
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>ref|XR_004510.1| PREDICTED: Mus musculus hypothetical gene supported by AK047219
            (LOC432907), misc RNA
          Length = 2034

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 55   tcctttttcttctctcctttt 75
            |||||||||||||||||||||
Sbjct: 1740 tcctttttcttctctcctttt 1760
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>ref|XR_002315.1| PREDICTED: Mus musculus hypothetical gene supported by AK047219
            (LOC432907), misc RNA
          Length = 2034

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 55   tcctttttcttctctcctttt 75
            |||||||||||||||||||||
Sbjct: 1740 tcctttttcttctctcctttt 1760
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>gb|AC116106.18| Mus musculus chromosome 16, clone RP23-23D5, complete sequence
          Length = 252718

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 43    ttacataatgtatcctttttcttctctcc 71
             ||||||||| ||||||||||||| |||||
Sbjct: 60694 ttacataatatatcctttttcttttctcc 60722
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>gb|AC129602.3| Mus musculus BAC clone RP23-37L24 from 16, complete sequence
          Length = 185729

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 43    ttacataatgtatcctttttcttctctcc 71
             ||||||||| ||||||||||||| |||||
Sbjct: 26463 ttacataatatatcctttttcttttctcc 26435
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>gb|AC154683.2| Mus musculus BAC clone RP23-142O4 from chromosome 14, complete sequence
          Length = 219067

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 55    tcctttttcttctctcctttt 75
             |||||||||||||||||||||
Sbjct: 41135 tcctttttcttctctcctttt 41115
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>gb|AC097530.3| Homo sapiens BAC clone RP11-696N14 from 4, complete sequence
          Length = 121868

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 215   cacctgcataattggtgtagt 235
             |||||||||||||||||||||
Sbjct: 89725 cacctgcataattggtgtagt 89705
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>emb|BX511060.7| Zebrafish DNA sequence from clone CH211-210L19 in linkage group 10,
             complete sequence
          Length = 139250

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 379   tgcagagcattcagcctgtcatagt 403
             |||||| ||||||||||||||||||
Sbjct: 71608 tgcagaccattcagcctgtcatagt 71584
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>dbj|AK047219.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:B930036O20
            product:unclassifiable, full insert sequence
          Length = 2037

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 55   tcctttttcttctctcctttt 75
            |||||||||||||||||||||
Sbjct: 1742 tcctttttcttctctcctttt 1762
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>gb|AC005234.1| Homo sapiens BAC clone RP11-436H22 from 2, complete sequence
          Length = 190753

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 53     tatcctttttcttctctcctt 73
              |||||||||||||||||||||
Sbjct: 100972 tatcctttttcttctctcctt 100992
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>gb|AC066688.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-438J16, complete
             sequence
          Length = 176367

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 55    tcctttttcttctctcctttt 75
             |||||||||||||||||||||
Sbjct: 48221 tcctttttcttctctcctttt 48201
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>gb|AC144798.4| Mus musculus BAC clone RP24-364A24 from 14, complete sequence
          Length = 159766

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 55     tcctttttcttctctcctttt 75
              |||||||||||||||||||||
Sbjct: 103506 tcctttttcttctctcctttt 103486
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>dbj|AP002027.1| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:496L13, complete
             sequence
          Length = 182676

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 215   cacctgcataattggtgtagt 235
             |||||||||||||||||||||
Sbjct: 86995 cacctgcataattggtgtagt 86975
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>ref|XM_638969.1| Dictyostelium discoideum hypothetical protein (DDB0167761), partial
           mRNA
          Length = 2382

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 135 ttcattatggaaactggtgcaata 158
           ||||||||||||| ||||||||||
Sbjct: 301 ttcattatggaaaatggtgcaata 324
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>gb|AC005202.1| Homo sapiens chromosome 16, cosmid clone RT290 (LANL), complete
             sequence
          Length = 39170

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   ttgcccctctcctggcctgt 379
             ||||||||||||||||||||
Sbjct: 33666 ttgcccctctcctggcctgt 33685
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>gb|AC110501.26| Mus musculus chromosome 9, clone RP24-448H20, complete sequence
          Length = 154359

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 41     ctttacataatgtatcctttttct 64
              ||||||||||||||||||| ||||
Sbjct: 133989 ctttacataatgtatccttattct 134012
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>gb|AC147312.3| Pan troglodytes BAC clone RP43-50K12 from 7, complete sequence
          Length = 214157

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 53     tatcctttttcttctctccttttg 76
              |||||||||||||||||| |||||
Sbjct: 183992 tatcctttttcttctctctttttg 183969
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>gb|AF216671.7| Homo sapiens chromosome 8 clone RP11-300I14 map q24.13, complete sequence
          Length = 183027

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 360    ttgcccctctcctggcctgt 379
              ||||||||||||||||||||
Sbjct: 124616 ttgcccctctcctggcctgt 124635
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>gb|AC092033.4| Homo sapiens BAC clone RP11-794I22 from 7, complete sequence
          Length = 218731

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   cttggacaaaaatgagtccg 325
             ||||||||||||||||||||
Sbjct: 40337 cttggacaaaaatgagtccg 40318
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>gb|AC004694.1| Homo sapiens BAC clone CTB-152H24 from 7, complete sequence
          Length = 63749

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    tgtatcctttttcttctctc 70
             ||||||||||||||||||||
Sbjct: 53118 tgtatcctttttcttctctc 53099
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>gb|AC006010.2| Homo sapiens PAC clone RP5-865F17 from 7, complete sequence
          Length = 114631

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    tatcctttttcttctctccttttg 76
             |||||||||||||||||| |||||
Sbjct: 24625 tatcctttttcttctctctttttg 24648
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>gb|AC147006.18| Medicago truncatula clone mth2-62m1, complete sequence
          Length = 126833

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    ctttttcttctctccttttg 76
             ||||||||||||||||||||
Sbjct: 25661 ctttttcttctctccttttg 25680
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>gb|AC153789.11| Mus musculus chromosome 8, clone RP23-466N7, complete sequence
          Length = 187150

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     tctgacaagcagttaataga 26
             ||||||||||||||||||||
Sbjct: 23826 tctgacaagcagttaataga 23807
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>emb|AL590622.7| Human DNA sequence from clone RP11-320F15 on chromosome 10 Contains
            the gene for ribonuclease P (30kD) (RPP30) and the gene
            for cardiac ankyrin repeat protein (CARP), complete
            sequence
          Length = 50111

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   tttttcttctctccttttgg 77
            ||||||||||||||||||||
Sbjct: 4515 tttttcttctctccttttgg 4534
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>emb|AL445669.9| Human DNA sequence from clone RP11-163G10 on chromosome 1 Contains the
             5' end of the ZMYND12 gene for zinc finger MYND domain
             containing 12, a novel gene, the 5' end of a novel gene, a
             ribosomal protein S3a (RPS3A) pseudogene, a thymosin, beta
             4, X-linked (TMSB4X) pseudogene, a novel pseudogene (DC2)
             and two CpG islands, complete sequence
          Length = 153640

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    atcctttttcttctctcctt 73
             ||||||||||||||||||||
Sbjct: 89595 atcctttttcttctctcctt 89576
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>emb|CR381576.10| Zebrafish DNA sequence from clone DKEY-245F17 in linkage group 17,
            complete sequence
          Length = 185749

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   tcctttttcttctctccttt 74
            ||||||||||||||||||||
Sbjct: 7132 tcctttttcttctctccttt 7113
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>emb|CR925752.5| Mouse DNA sequence from clone RP24-106O24 on chromosome 4, complete
             sequence
          Length = 103739

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   tagctatatagccaaggctt 308
             ||||||||||||||||||||
Sbjct: 89665 tagctatatagccaaggctt 89646
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>gb|AE006463.1| Homo sapiens 16p13.3 sequence section 2 of 8
          Length = 260418

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   ttgcccctctcctggcctgt 379
             ||||||||||||||||||||
Sbjct: 94430 ttgcccctctcctggcctgt 94449
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>emb|BX088698.22| Mouse DNA sequence from clone RP23-309D15 on chromosome X, complete
             sequence
          Length = 184201

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    ttttcttctctccttttgga 78
             ||||||||||||||||||||
Sbjct: 26269 ttttcttctctccttttgga 26288
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>emb|BX511016.5| Zebrafish DNA sequence from clone DKEY-181N13 in linkage group 2,
           complete sequence
          Length = 43337

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 390 cagcctgtcatagtaatggc 409
           ||||||||||||||||||||
Sbjct: 563 cagcctgtcatagtaatggc 582
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 115      gttacaacttacaagcagca 134
                ||||||||||||||||||||
Sbjct: 18812214 gttacaacttacaagcagca 18812195
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>gb|AC073433.9|AC073433 Arabidopsis thaliana chromosome 1 BAC F19C17 genomic sequence, complete
             sequence
          Length = 117055

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   attcaccattggattaggat 289
             ||||||||||||||||||||
Sbjct: 70382 attcaccattggattaggat 70363
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>gb|AC117070.2| Dictyostelium discoideum chromosome 2 map 2097701-2233941 strain AX4,
            complete sequence
          Length = 136240

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 135  ttcattatggaaactggtgcaata 158
            ||||||||||||| ||||||||||
Sbjct: 6282 ttcattatggaaaatggtgcaata 6305
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>gb|AC104035.6| Homo sapiens chromosome 15, clone RP11-661P17, complete sequence
          Length = 200370

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   aactggtgcaatacaagcat 165
             ||||||||||||||||||||
Sbjct: 96062 aactggtgcaatacaagcat 96081
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>gb|AC174163.2| Gallus gallus BAC clone CH261-69O1 from chromosome ul, complete
             sequence
          Length = 178322

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    atagactaaaactgcaacac 41
             ||||||||||||||||||||
Sbjct: 84498 atagactaaaactgcaacac 84517
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>emb|CR937049.3| CH230-323M7, complete sequence
          Length = 198674

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    tttacataatgtatcctttt 61
             ||||||||||||||||||||
Sbjct: 98801 tttacataatgtatcctttt 98782
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>gb|AC115809.8| Mus musculus chromosome 8, clone RP23-416L3, complete sequence
          Length = 193884

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      tctgacaagcagttaataga 26
              ||||||||||||||||||||
Sbjct: 153739 tctgacaagcagttaataga 153720
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>gb|AF091216.1|AF091216 Mus musculus Wrn protein (Wrn) gene, complete cds
          Length = 97348

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     tctgacaagcagttaataga 26
             ||||||||||||||||||||
Sbjct: 60801 tctgacaagcagttaataga 60782
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>emb|BX004970.8| Zebrafish DNA sequence from clone DKEY-9I4, complete sequence
          Length = 246777

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     actttacataatgtatcctt 59
              ||||||||||||||||||||
Sbjct: 147734 actttacataatgtatcctt 147715
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>emb|CT009706.20| Mouse DNA sequence from clone RP23-131H17 on chromosome 9, complete
              sequence
          Length = 215322

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 41     ctttacataatgtatcctttttct 64
              ||||||||||||||||||| ||||
Sbjct: 185484 ctttacataatgtatccttattct 185461
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>emb|Z98272.1|HS415C1 Human DNA sequence from clone LA16c-415C1 on chromosome 16, complete
             sequence
          Length = 23786

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   ttgcccctctcctggcctgt 379
             ||||||||||||||||||||
Sbjct: 19636 ttgcccctctcctggcctgt 19655
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>emb|AL672253.7| Mouse DNA sequence from clone RP23-13G19 on chromosome 2, complete
             sequence
          Length = 182150

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   gctctcccacctgcataatt 227
             ||||||||||||||||||||
Sbjct: 77626 gctctcccacctgcataatt 77645
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>gb|AC105258.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_G07,
             complete sequence
          Length = 71145

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   gttacaacttacaagcagca 134
             ||||||||||||||||||||
Sbjct: 34580 gttacaacttacaagcagca 34561


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,050,431
Number of Sequences: 3902068
Number of extensions: 4050431
Number of successful extensions: 83319
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83105
Number of HSP's gapped (non-prelim): 210
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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