Clone Name | rbastl50c06 |
---|---|
Clone Library Name | barley_pub |
>ALA1_ARATH (P98204) Phospholipid-transporting ATPase 1 (EC 3.6.3.1)| (Aminophospholipid flippase 1) Length = 1158 Score = 69.7 bits (169), Expect = 4e-12 Identities = 34/91 (37%), Positives = 51/91 (56%) Frame = -3 Query: 469 TIAATVICLFVIDSIWVLPGYGVIYHIMGQGLFWLLLLIIVVTAMVPHFATKAFMEHFVP 290 +I A IC+ VID I LPGY I+ + +FW LL IVVT+++P FA K +E++ P Sbjct: 1065 SIVAACICVIVIDVIPTLPGYWAIFQVGKTWMFWFCLLAIVVTSLLPRFAIKFLVEYYRP 1124 Query: 289 TDIQIGQEIEKFKALNQVNRSEIPMRTFS*P 197 +D++I +E EK + + M P Sbjct: 1125 SDVRIAREAEKLGTFRESQPVGVEMNLIQDP 1155
>ATC3_YEAST (P39524) Probable phospholipid-transporting ATPase DRS2 (EC 3.6.3.1)| Length = 1355 Score = 45.1 bits (105), Expect = 9e-05 Identities = 18/52 (34%), Positives = 31/52 (59%) Frame = -3 Query: 409 YGVIYHIMGQGLFWLLLLIIVVTAMVPHFATKAFMEHFVPTDIQIGQEIEKF 254 YGV+ H G G+FWL L+++ + A+V F K + + P + QE++K+ Sbjct: 1193 YGVVKHTYGSGVFWLTLIVLPIFALVRDFLWKYYKRMYEPETYHVIQEMQKY 1244
>AT10A_MOUSE (O54827) Probable phospholipid-transporting ATPase VA (EC 3.6.3.1)| (P-locus fat-associated ATPase) Length = 1508 Score = 39.3 bits (90), Expect = 0.005 Identities = 20/69 (28%), Positives = 35/69 (50%) Frame = -3 Query: 409 YGVIYHIMGQGLFWLLLLIIVVTAMVPHFATKAFMEHFVPTDIQIGQEIEKFKALNQVNR 230 Y + ++G LF+L LI + A++P KA PT +Q+G+++ K +N+ Sbjct: 1276 YWTMQTLLGDPLFYLTCLIAPIAALLPRLFFKALQGSLFPTQLQLGRQLAK----KPLNK 1331 Query: 229 SEIPMRTFS 203 P TF+ Sbjct: 1332 FSDPKETFA 1340
>ATC5_YEAST (P32660) Probable phospholipid-transporting ATPase DNF1 (EC 3.6.3.1)| Length = 1571 Score = 36.2 bits (82), Expect = 0.043 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = -3 Query: 391 IMGQGLFWLLLLIIVVTAMVPHFATKAFMEHFVPTDIQIGQEI 263 I G FW + + V+ ++P F +F + F PTD++I +E+ Sbjct: 1372 IYGAPSFWAVFFVAVLFCLLPRFTYDSFQKFFYPTDVEIVREM 1414
>ALA7_ARATH (Q9LVK9) Putative phospholipid-transporting ATPase 7 (EC 3.6.3.1)| (Aminophospholipid flippase 7) Length = 1247 Score = 35.8 bits (81), Expect = 0.057 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 5/57 (8%) Frame = -3 Query: 406 GVIYHIMGQGL-----FWLLLLIIVVTAMVPHFATKAFMEHFVPTDIQIGQEIEKFK 251 G I+H++ + L FWL L+++ +P+ A +F P D I QEI+ F+ Sbjct: 1123 GNIFHMLSETLAPAPIFWLTSLLVIAATTLPYLAYISFQRSLNPLDHHIIQEIKHFR 1179
>ALA5_ARATH (Q9SGG3) Putative phospholipid-transporting ATPase 5 (EC 3.6.3.1)| (Aminophospholipid flippase 5) Length = 1228 Score = 35.8 bits (81), Expect = 0.057 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 6/70 (8%) Frame = -3 Query: 445 LFVIDSIWVLPGY-GVIYHIMGQGL-----FWLLLLIIVVTAMVPHFATKAFMEHFVPTD 284 LFV + P Y G IY I+ + L +W+ L++ V A++P+ A AF P D Sbjct: 1098 LFVAIYSMMPPSYSGNIYRILDEILAPAPIYWMATLLVTVAAVLPYVAHIAFQRFLNPLD 1157 Query: 283 IQIGQEIEKF 254 I QEI+ + Sbjct: 1158 HHIIQEIKYY 1167
>ALA4_ARATH (Q9LNQ4) Putative phospholipid-transporting ATPase 4 (EC 3.6.3.1)| (Aminophospholipid flippase 4) Length = 1216 Score = 35.8 bits (81), Expect = 0.057 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = -3 Query: 409 YGVIYHIMGQG-LFWLLLLIIVVTAMVPHFATKAFMEHFVPTDIQIGQEIEKFK 251 Y ++ I+ ++W+ ++ VT ++P+FA +F P D I QEI+ +K Sbjct: 1103 YRILVEILAPAPIYWIATFLVTVTTVLPYFAHISFQRFLHPLDHHIIQEIKYYK 1156
>ALA3_ARATH (Q9XIE6) Putative phospholipid-transporting ATPase 3 (EC 3.6.3.1)| (Aminophospholipid flippase 3) Length = 1213 Score = 34.3 bits (77), Expect = 0.16 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = -3 Query: 409 YGVIYHIMGQGLFWLLLLIIVVTAMVPHFATKAFMEHFVPTDIQIGQEIEKFKA 248 Y VIY +M F+ LL++ + +++ F + F P D QI QEI + ++ Sbjct: 1082 YFVIYVLMSTFYFYFTLLLVPIVSLLGDFIFQGVERWFFPYDYQIVQEIHRHES 1135
>ALA8_ARATH (Q9LK90) Putative phospholipid-transporting ATPase 8 (EC 3.6.3.1)| (Aminophospholipid flippase 8) Length = 1189 Score = 32.3 bits (72), Expect = 0.63 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = -3 Query: 376 LFWLLLLIIVVTAMVPHFATKAFMEHFVP 290 ++WL+L ++V +A++P+F +AF F P Sbjct: 1113 IYWLVLFLVVFSALLPYFTYRAFQIKFRP 1141
>AT11B_HUMAN (Q9Y2G3) Probable phospholipid-transporting ATPase IF (EC 3.6.3.1)| (ATPase class I type 11B) (ATPase IR) Length = 1177 Score = 32.0 bits (71), Expect = 0.82 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Frame = -3 Query: 454 VICLFVIDSIWVLPG----YGVIYHIMGQGLFWLLLLIIVVTAMVPHFATKAFMEHFVPT 287 V LF +W G Y V ++ G W ++++VVT + K F H PT Sbjct: 1041 VFSLFYGGILWPFLGSQNMYFVFIQLLSSGSAWFAIILMVVTCLFLDIIKKVFDRHLHPT 1100 Query: 286 DIQIGQEIE 260 + Q E Sbjct: 1101 STEKAQLTE 1109
>AT10A_HUMAN (O60312) Probable phospholipid-transporting ATPase VA (EC 3.6.3.1)| (ATPVA) (Aminophospholipid translocase VA) Length = 1499 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/69 (21%), Positives = 32/69 (46%) Frame = -3 Query: 409 YGVIYHIMGQGLFWLLLLIIVVTAMVPHFATKAFMEHFVPTDIQIGQEIEKFKALNQVNR 230 Y + ++G +F+L L+ V A++P ++ PT +Q+ +++ + R Sbjct: 1262 YWTMQALLGDPVFYLTCLMTPVAALLPRLFFRSLQGRVFPTQLQLARQLTR----KSPRR 1317 Query: 229 SEIPMRTFS 203 P TF+ Sbjct: 1318 CSAPKETFA 1326
>ATC4_YEAST (Q12675) Probable phospholipid-transporting ATPase DNF2 (EC 3.6.3.1)| Length = 1612 Score = 30.4 bits (67), Expect = 2.4 Identities = 12/43 (27%), Positives = 23/43 (53%) Frame = -3 Query: 391 IMGQGLFWLLLLIIVVTAMVPHFATKAFMEHFVPTDIQIGQEI 263 + Q +W +L + V+ ++P F + F P DI+I +E+ Sbjct: 1415 VFAQPAYWAVLFVGVLFCLLPRFTIDCIRKIFYPKDIEIVREM 1457
>ALA6_ARATH (Q9SLK6) Putative phospholipid-transporting ATPase 6 (EC 3.6.3.1)| (Aminophospholipid flippase 6) Length = 1244 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = -3 Query: 406 GVIYHIMGQGL-----FWLLLLIIVVTAMVPHFATKAFMEHFVPTDIQIGQEIEKFK 251 G I+H++ + L FWL L+++ +P+ ++ P D I QEI+ F+ Sbjct: 1125 GNIFHMLVEILAPAPIFWLTSLLVIAATTLPYLFHISYQRSVNPLDHHIIQEIKHFR 1181
>ATCX_SCHPO (Q09891) Putative phospholipid-transporting ATPase 1 (EC 3.6.3.1)| Length = 1402 Score = 29.6 bits (65), Expect = 4.1 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = -3 Query: 373 FWLLLLIIVVTAMVPHFATKAFMEHFVPTDIQIGQEIEKFKALNQVNRSE 224 FW +L +V+ + P F + F P D+ I +E + K L++++ E Sbjct: 1260 FWAVLCGTIVSCLFPKFLFMTTQKLFWPYDVDIIRESYRTKRLHELDEEE 1309
>LASS3_HUMAN (Q8IU89) LAG1 longevity assurance homolog 3| Length = 383 Score = 29.6 bits (65), Expect = 4.1 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -1 Query: 354 LLLSQQWSHILQPRLSWSILFPLTFKSDKK 265 LL SQ W +IL+ WS+LF L F +K Sbjct: 174 LLPSQYWYYILEMSFYWSLLFRLGFDVKRK 203
>FLNA_MOUSE (Q8BTM8) Filamin-A (Alpha-filamin) (Filamin-1) (Endothelial| actin-binding protein) (Actin-binding protein 280) (ABP-280) (Nonmuscle filamin) Length = 2646 Score = 28.9 bits (63), Expect = 6.9 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 10/59 (16%) Frame = +2 Query: 248 SLKLLYFLSDLNVSGNK----------MLHESLGCKMWDHCCDNNNKQQ*PKQALSHYV 394 S+KL+ S V GN +LH S+ MWD D K+Q PKQ L ++ Sbjct: 117 SIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTPKQRLLGWI 175
>FLNA_HUMAN (P21333) Filamin-A (Alpha-filamin) (Filamin-1) (Endothelial| actin-binding protein) (Actin-binding protein 280) (ABP-280) (Nonmuscle filamin) Length = 2646 Score = 28.9 bits (63), Expect = 6.9 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 10/59 (16%) Frame = +2 Query: 248 SLKLLYFLSDLNVSGNK----------MLHESLGCKMWDHCCDNNNKQQ*PKQALSHYV 394 S+KL+ S V GN +LH S+ MWD D K+Q PKQ L ++ Sbjct: 117 SIKLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEAKKQTPKQRLLGWI 175
>CADN_DROME (O15943) Neural-cadherin precursor (Cadherin-N protein) (DN-cadherin)| Length = 3097 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = -3 Query: 397 YHIMGQGLFWLLLLIIVVTAMVPHFATKAFMEHFVPTDIQIGQEIEKFKA 248 YH+ W+++ + + PHF +A +E V D ++G E+EKFKA Sbjct: 1840 YHV---AYSWVVVKLRDINDNKPHFE-RANVEVSVFEDTKVGTELEKFKA 1885
>YP67_CAEEL (Q09216) Hypothetical protein B0495.7| Length = 895 Score = 28.9 bits (63), Expect = 6.9 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = -3 Query: 427 IWVLPGYGVIYHIMGQGLFWLLLLIIVVTAMVPHFATKAFMEHFVPTDIQIGQEI 263 IW L +GVI + + LF+ L + T + +A ++ FVP ++G I Sbjct: 529 IWALGLFGVIRRVTPRVLFFTQLFCFLPTFVFAAYAISQCVDFFVPVMGRLGNAI 583
>LAMC3_HUMAN (Q9Y6N6) Laminin gamma-3 chain precursor (Laminin 12 gamma 3 subunit)| Length = 1587 Score = 28.9 bits (63), Expect = 6.9 Identities = 13/29 (44%), Positives = 13/29 (44%) Frame = -2 Query: 362 AAYYCCHSNGPTFCNQGFHGAFCSH*HSN 276 AA CH NG C GF G C H N Sbjct: 972 AASAQCHYNGTCVCRPGFEGYKCDRCHYN 1000
>ALA10_ARATH (Q9LI83) Putative phospholipid-transporting ATPase 10 (EC 3.6.3.1)| (Aminophospholipid flippase 10) Length = 1202 Score = 28.9 bits (63), Expect = 6.9 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = -3 Query: 373 FWLLLLIIVVTAMVPHFATKAFMEHFVPTDIQIGQEI 263 +WL L +++ A++P+F K+ F P Q+ Q I Sbjct: 1114 YWLTTLFVMIFALIPYFVYKSVQMRFFPKYHQMIQWI 1150
>DOF21_ARATH (Q8LE43) Dof zinc finger protein DOF2.1 (AtDOF2.1)| Length = 288 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +1 Query: 133 GNEQKKQNIRKNTNTICNFPARVMKTFALEFLNDSPDLKP 252 GNE+K++N+ N N N P++V F + DS + P Sbjct: 224 GNERKQENVNNNNNNSEN-PSKVFWGFPWQMTGDSAGVVP 262
>AT11B_RABIT (Q9N0Z4) Probable phospholipid-transporting ATPase IF (EC 3.6.3.1)| (ATPase class I type 11B) (ATPase IR) (RING-finger-binding protein) (Fragment) Length = 1169 Score = 28.5 bits (62), Expect = 9.1 Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 4/78 (5%) Frame = -3 Query: 454 VICLFVIDSIWVLPG----YGVIYHIMGQGLFWLLLLIIVVTAMVPHFATKAFMEHFVPT 287 V LF +W G Y V ++ G W ++++VVT + K F PT Sbjct: 1033 VFSLFYGGILWPFLGSQNMYFVFIQLVSSGSAWFAIILMVVTCLFLDVMKKVFDRQLHPT 1092 Query: 286 DIQIGQEIEKFKALNQVN 233 + Q E ++ V+ Sbjct: 1093 STEKAQLTETNSSIKCVD 1110
>ALA9_ARATH (Q9SX33) Putative phospholipid-transporting ATPase 9 (EC 3.6.3.1)| (Aminophospholipid flippase 9) Length = 1200 Score = 28.5 bits (62), Expect = 9.1 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -3 Query: 373 FWLLLLIIVVTAMVPHFATKAFMEHFVP 290 +WL+ L +VV ++P+F A F P Sbjct: 1119 YWLITLFVVVATLMPYFIYSALQMSFFP 1146 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,433,375 Number of Sequences: 219361 Number of extensions: 1309602 Number of successful extensions: 3427 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3336 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3426 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)