>JHD3C_MOUSE (Q8VCD7) JmjC domain-containing histone demethylation protein 3C|
           (EC 1.14.11.-) (Jumonji domain-containing protein 2C)
          Length = 1054

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 385 LFKSHLFHVEFLRECLDLDDEVRETASWTQGMIN 284
           L K  +   E L E L +D+EV ET SW + +I+
Sbjct: 584 LVKQQVASDEELPEVLSIDEEVEETESWAKPLIH 617

>YAAG_BACSU (P37530) Hypothetical protein yaaG|
          Length = 207

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 13/66 (19%)
 Frame = +2

Query: 263 RLKNYRLVYHPLGP*RRLPHFIIQIEA-------------LPQELNMEEVALEQILRDWP 403
           +L+ Y+ +YH L      P+FII I+A              P E  +E   LEQ++ D+ 
Sbjct: 104 QLEKYKKIYHLLTDDLPKPNFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLISDYE 163

Query: 404 KCVRKI 421
             ++++
Sbjct: 164 VAIKQL 169


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,651,808
Number of Sequences: 219361
Number of extensions: 1171411
Number of successful extensions: 2485
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2485
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)