>gb|AC132488.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0522C01,
              complete sequence
          Length = 136120

 Score =  143 bits (72), Expect = 6e-31
 Identities = 171/204 (83%)
 Strand = Plus / Minus

                                                                          
Query: 159    ttcagaggaactggtgtagccagggattactggctgcgtctttctcgaagtctgatttca 218
              |||| |||||||| || ||||| ||||||   ||||| |||||||||||||| |||||||
Sbjct: 124625 ttcaaaggaactgctgaagccaaggattatcagctgcatctttctcgaagtcggatttca 124566

                                                                          
Query: 219    gtttagctaccatctccgtagccttgctcccatccacctcatctagaggcaatgcagcaa 278
              |||| |  ||  | || |  |||||| | ||||||| ||| |||||||||||||  || |
Sbjct: 124565 gtttggtgacggtttctgcggccttggtgccatccatctcgtctagaggcaatgaggcca 124506

                                                                          
Query: 279    aatcctctaacaaaaggcgagcccgagcagctcccctcgtcacatcatctgggctaaaca 338
              | ||||| |||||||||||||| ||||||||||| || |||||||| ||||||||||| |
Sbjct: 124505 attcctccaacaaaaggcgagcgcgagcagctcctctagtcacatcgtctgggctaaata 124446

                                      
Query: 339    ccctcttgcgtttcgatccaacct 362
              ||||||||||||| ||||||||||
Sbjct: 124445 ccctcttgcgttttgatccaacct 124422



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                               
Query: 404    tcttctaactcttcagctttgcttttcgcaagagcaatgacagcttctg 452
              |||||||| ||||| ||||||||||| ||||||||||  ||||||||||
Sbjct: 124065 tcttctaattcttctgctttgctttttgcaagagcaacaacagcttctg 124017

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  143 bits (72), Expect = 6e-31
 Identities = 171/204 (83%)
 Strand = Plus / Minus

                                                                            
Query: 159      ttcagaggaactggtgtagccagggattactggctgcgtctttctcgaagtctgatttca 218
                |||| |||||||| || ||||| ||||||   ||||| |||||||||||||| |||||||
Sbjct: 11097335 ttcaaaggaactgctgaagccaaggattatcagctgcatctttctcgaagtcggatttca 11097276

                                                                            
Query: 219      gtttagctaccatctccgtagccttgctcccatccacctcatctagaggcaatgcagcaa 278
                |||| |  ||  | || |  |||||| | ||||||| ||| |||||||||||||  || |
Sbjct: 11097275 gtttggtgacggtttctgcggccttggtgccatccatctcgtctagaggcaatgaggcca 11097216

                                                                            
Query: 279      aatcctctaacaaaaggcgagcccgagcagctcccctcgtcacatcatctgggctaaaca 338
                | ||||| |||||||||||||| ||||||||||| || |||||||| ||||||||||| |
Sbjct: 11097215 attcctccaacaaaaggcgagcgcgagcagctcctctagtcacatcgtctgggctaaata 11097156

                                        
Query: 339      ccctcttgcgtttcgatccaacct 362
                ||||||||||||| ||||||||||
Sbjct: 11097155 ccctcttgcgttttgatccaacct 11097132



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                 
Query: 404      tcttctaactcttcagctttgcttttcgcaagagcaatgacagcttctg 452
                |||||||| ||||| ||||||||||| ||||||||||  ||||||||||
Sbjct: 11096775 tcttctaattcttctgctttgctttttgcaagagcaacaacagcttctg 11096727

>gb|AY110865.1| Zea mays CL588_1 mRNA sequence
          Length = 3331

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 107/126 (84%)
 Strand = Plus / Minus

                                                                        
Query: 241  cttgctcccatccacctcatctagaggcaatgcagcaaaatcctctaacaaaaggcgagc 300
            |||||||||||||| |||||| | ||||||||| || || ||||| |  ||||| |||||
Sbjct: 2828 cttgctcccatccatctcatccataggcaatgcggcgaattcctcaaggaaaagccgagc 2769

                                                                        
Query: 301  ccgagcagctcccctcgtcacatcatctgggctaaacaccctcttgcgtttcgatccaac 360
            ||| |||||||| || || |  |||||||||||||| ||||||||||| || ||||||||
Sbjct: 2768 ccgtgcagctcctctggtgatgtcatctgggctaaataccctcttgcgctttgatccaac 2709

                  
Query: 361  ctcgtc 366
            ||||||
Sbjct: 2708 ctcgtc 2703



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                 
Query: 400  aaagtcttctaactcttcagctttgcttttcgcaagagcaatgacagcttctg 452
            |||||||||||||||| | ||||||||||||||||| ||||  ||||||||||
Sbjct: 2669 aaagtcttctaactctgctgctttgcttttcgcaagggcaacaacagcttctg 2617

>emb|AJ238785.1|ZMA238785 Zea mays mus1 gene, exons 1-13
          Length = 10376

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                        
Query: 241  cttgctcccatccacctcatctagaggcaatgcagcaaaatcctctaacaaaaggcgagc 300
            |||||||||||||| |||||| | ||||||||| || || ||||| |  ||||| |||||
Sbjct: 9964 cttgctcccatccatctcatccataggcaatgcggcgaattcctcaaggaaaagccgagc 9905

                                                                        
Query: 301  ccgagcagctcccctcgtcacatcatctgggctaaacaccctcttgcgtttcgatccaac 360
            ||| |||||||| || || |  |||||||||||||| ||||||||||| || ||||||||
Sbjct: 9904 ccgtgcagctcctctggtgatgtcatctgggctaaataccctcttgcgctttgatccaac 9845

              
Query: 361  ct 362
            ||
Sbjct: 9844 ct 9843



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                 
Query: 400  aaagtcttctaactcttcagctttgcttttcgcaagagcaatgacagcttctg 452
            |||||||||||||||| | ||||||||||||||||| ||||  ||||||||||
Sbjct: 9495 aaagtcttctaactctgctgctttgcttttcgcaagggcaacaacagcttctg 9443

>gb|AC134882.2| Homo sapiens BAC clone RP11-886I11 from Y, complete sequence
          Length = 152654

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 140   tccatccctttccattccattc 161
             ||||||||||||||||||||||
Sbjct: 97422 tccatccctttccattccattc 97401

>gb|AC134879.3| Homo sapiens BAC clone RP11-295P22 from Y, complete sequence
          Length = 205515

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 140   tccatccctttccattccattc 161
             ||||||||||||||||||||||
Sbjct: 80487 tccatccctttccattccattc 80508

>emb|BX322639.2| Human DNA sequence from clone RP11-313J2 on chromosome 10 Contains a
             zinc finger protein pseudogene and a CpG island, complete
             sequence
          Length = 87299

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 140   tccatccctttccattccattc 161
             ||||||||||||||||||||||
Sbjct: 22095 tccatccctttccattccattc 22116



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 140  tccatccctttccattccattcag 163
            ||||| ||||||||||||||||||
Sbjct: 6497 tccattcctttccattccattcag 6520

>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 200     ttctcgaagtctgatttcagt 220
               |||||||||||||||||||||
Sbjct: 1644679 ttctcgaagtctgatttcagt 1644659

>gb|AF254982.4| Homo sapiens chromosome 21 clone CTD-2503J9 map p11-q21.1, complete
              sequence
          Length = 211345

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 140    tccatccctttccattccatt 160
              |||||||||||||||||||||
Sbjct: 156995 tccatccctttccattccatt 156975



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 138    gatccatccctttccattccattc 161
              ||||||| ||||||||||||||||
Sbjct: 132733 gatccattcctttccattccattc 132710

>emb|AJ748324.1| Sulfolobus islandicus plasmid pHVE14
          Length = 35422

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 405   cttctaactcttcagctttgctttt 429
             ||||||||||| |||||||||||||
Sbjct: 15343 cttctaactctgcagctttgctttt 15367

>gb|AC020954.8| Homo sapiens chromosome 19 clone LLNLR-292A7, complete sequence
          Length = 39855

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 141   ccatccctttccattccattc 161
             |||||||||||||||||||||
Sbjct: 34830 ccatccctttccattccattc 34850

>gb|AC022334.66| Homo sapiens 12 BAC RP11-365O10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 122025

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 30    taacaaaaggatttagtagag 50
             |||||||||||||||||||||
Sbjct: 47266 taacaaaaggatttagtagag 47286

>gb|AC022156.8|AC022156 Homo sapiens chromosome 19 clone LLNLR-272E8, complete sequence
          Length = 33931

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 141  ccatccctttccattccattc 161
            |||||||||||||||||||||
Sbjct: 7739 ccatccctttccattccattc 7759

>gb|AC167012.3| Mus musculus BAC clone RP23-416A5 from chromosome 13, complete sequence
          Length = 193916

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 270   atgcagcaaaatcctctaacaaaa 293
             ||||||||||||||| ||||||||
Sbjct: 87128 atgcagcaaaatcctttaacaaaa 87105

>ref|XM_865865.1| PREDICTED: Bos taurus similar to glutamate receptor delta-1 subunit
            (LOC614379), mRNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 233  tccgtagccttgctcccatccacc 256
            ||||||||||||||| ||||||||
Sbjct: 1181 tccgtagccttgctcacatccacc 1204

>gb|AC132624.3| Mus musculus BAC clone RP23-77B21 from chromosome 18, complete sequence
          Length = 161099

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    acctcatctagaggcaatgc 273
              ||||||||||||||||||||
Sbjct: 108971 acctcatctagaggcaatgc 108990

>gb|AC123819.2| Mus musculus BAC clone RP23-460M11 from chromosome 8, complete sequence
          Length = 202899

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   atgcagcaaaatcctctaac 289
             ||||||||||||||||||||
Sbjct: 47136 atgcagcaaaatcctctaac 47155

>emb|Z95889.1|HS211A9 Human DNA sequence from clone CTA-211A9 on chromosome 22q12.1, complete
             sequence
          Length = 117939

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 140   tccatccctttccattccattcag 163
             ||||||||||||||| ||||||||
Sbjct: 29682 tccatccctttccatcccattcag 29705

>emb|AL590623.16| Human DNA sequence from clone RP11-96F8 on chromosome 10 Contains a
             N-acetylated alpha-linked acidic dipeptidase 2 (NAALAD2)
             pseudogene, complete sequence
          Length = 81908

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 140   tccatccctttccattccattcag 163
             ||||| ||||||||||||||||||
Sbjct: 43553 tccattcctttccattccattcag 43530



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 138   gatccatccctttccattccattc 161
             ||||||| ||||||||||||||||
Sbjct: 21785 gatccattcctttccattccattc 21808

>emb|AL359741.9| Human DNA sequence from clone RP11-161P17 on chromosome 13 Contains a
              novel pseudogene, complete sequence
          Length = 139877

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    ccttgctcccatccacctca 259
              ||||||||||||||||||||
Sbjct: 133801 ccttgctcccatccacctca 133820

>gb|AY239985.1| Dendrobium nindii 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 675

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 gccttgctcccatccacctc 258
           ||||||||||||||||||||
Sbjct: 566 gccttgctcccatccacctc 547

>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7
          Length = 348764

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    gatcagcgatccatcccttt 150
              ||||||||||||||||||||
Sbjct: 284719 gatcagcgatccatcccttt 284700

>emb|BX465185.8| Zebrafish DNA sequence from clone CH211-39F23 in linkage group 23,
            complete sequence
          Length = 148690

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   gtttacttgcactaacaaaa 37
            ||||||||||||||||||||
Sbjct: 9301 gtttacttgcactaacaaaa 9320

>gb|AC080078.7| Homo sapiens BAC clone RP11-461L13 from 4, complete sequence
          Length = 150567

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   cctttccattccattcagag 165
             ||||||||||||||||||||
Sbjct: 76656 cctttccattccattcagag 76637

>gb|AC096576.3| Homo sapiens BAC clone RP11-556G22 from 4, complete sequence
          Length = 213044

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   tccatccctttccattccat 159
             ||||||||||||||||||||
Sbjct: 13615 tccatccctttccattccat 13634

>gb|AC020760.6| Homo sapiens chromosome 16 clone RP11-151C19, complete sequence
          Length = 188872

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 140   tccatccctttccattccattcag 163
             ||||| ||||||||||||||||||
Sbjct: 21310 tccattcctttccattccattcag 21287

>gb|AC009505.3| Homo sapiens BAC clone RP11-526D2 from 2, complete sequence
          Length = 163880

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 270    atgcagcaaaatcctctaacaaaa 293
              |||||| |||||||||||||||||
Sbjct: 135607 atgcagaaaaatcctctaacaaaa 135584

>gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete sequence
          Length = 187799

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    agccagggattactggctgc 195
              ||||||||||||||||||||
Sbjct: 127693 agccagggattactggctgc 127674

>gb|AC159261.4| Mus musculus BAC clone RP24-80C13 from chromosome 13, complete sequence
          Length = 230437

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 270   atgcagcaaaatcctctaacaaaa 293
             ||||||||||||||| ||||||||
Sbjct: 58834 atgcagcaaaatcctttaacaaaa 58811


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,485,926
Number of Sequences: 3902068
Number of extensions: 4485926
Number of successful extensions: 87053
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84379
Number of HSP's gapped (non-prelim): 2674
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)