>gb|AC102595.9| Mus musculus chromosome 10, clone RP23-360M11, complete sequence
          Length = 223843

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 198   tactagagaaggaaaaggttta 219
             ||||||||||||||||||||||
Sbjct: 52432 tactagagaaggaaaaggttta 52411

>gb|AC158599.7| Mus musculus 10 BAC RP23-122O12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 191825

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 198    tactagagaaggaaaaggttta 219
              ||||||||||||||||||||||
Sbjct: 163916 tactagagaaggaaaaggttta 163895

>gb|AC130677.12| Mus musculus chromosome 7, clone RP24-529F12, complete sequence
          Length = 166181

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 198   tactagagaaggaaaaggttt 218
             |||||||||||||||||||||
Sbjct: 17320 tactagagaaggaaaaggttt 17300

>gb|AC151574.2| Mus musculus BAC clone RP23-430A4 from 7, complete sequence
          Length = 219246

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 198    tactagagaaggaaaaggttt 218
              |||||||||||||||||||||
Sbjct: 175379 tactagagaaggaaaaggttt 175359

>gb|AF412833.1| Danio rerio mismatch repair protein Msh2 (msh2) mRNA, complete cds
          Length = 3012

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 aaaagattgcaatgtcttgc 301
           ||||||||||||||||||||
Sbjct: 802 aaaagattgcaatgtcttgc 821

>gb|AE017263.1| Mesoplasma florum L1 complete genome
          Length = 793224

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    aaaaggtttaagagaaagtt 229
              ||||||||||||||||||||
Sbjct: 536876 aaaaggtttaagagaaagtt 536857

>gb|AC161490.7| Mus musculus chromosome 7, clone RP23-307M23, complete sequence
          Length = 169596

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 210    aaaaggtttaagagaaagttccaa 233
              ||||| ||||||||||||||||||
Sbjct: 110303 aaaagttttaagagaaagttccaa 110280

>gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosome 18, complete sequence
          Length = 173054

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    ttgaatttccatgtgcagtg 125
              ||||||||||||||||||||
Sbjct: 105498 ttgaatttccatgtgcagtg 105517

>gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome 18, complete sequence
          Length = 186726

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    ttgaatttccatgtgcagtg 125
              ||||||||||||||||||||
Sbjct: 175106 ttgaatttccatgtgcagtg 175087

>emb|Z97211.2|SPBC2F12 S.pombe chromosome II cosmid c2F12
          Length = 38012

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   tgcgttttgcagcaaaagat 288
             ||||||||||||||||||||
Sbjct: 21299 tgcgttttgcagcaaaagat 21318

>gb|AC159305.3| Mus musculus BAC clone RP23-205D10 from chromosome 6, complete
            sequence
          Length = 209064

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  ctagaatcccaagtgcccat 151
            ||||||||||||||||||||
Sbjct: 1836 ctagaatcccaagtgcccat 1855

>emb|AL808125.11| Mouse DNA sequence from clone RP23-193L22 on chromosome 2, complete
              sequence
          Length = 236619

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    cacttgccttccaggaagct 189
              ||||||||||||||||||||
Sbjct: 162910 cacttgccttccaggaagct 162891

>gb|DP000059.1| Carollia perspicillata target 117 genomic scaffold
          Length = 359132

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 194    gttttactagagaaggaaaaggtt 217
              ||||||||||| ||||||||||||
Sbjct: 275799 gttttactagaaaaggaaaaggtt 275776

>dbj|AK134020.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830408J16 product:unclassifiable, full
            insert sequence
          Length = 2208

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  ctagaatcccaagtgcccat 151
            ||||||||||||||||||||
Sbjct: 1228 ctagaatcccaagtgcccat 1209

>ref|XM_697605.1| PREDICTED: Danio rerio hypothetical protein LOC555149 (LOC555149),
           mRNA
          Length = 3052

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 aaaagattgcaatgtcttgc 301
           ||||||||||||||||||||
Sbjct: 828 aaaagattgcaatgtcttgc 847

>dbj|AK048469.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130063H01 product:unclassifiable, full
            insert sequence
          Length = 4683

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  cacttgccttccaggaagct 189
            ||||||||||||||||||||
Sbjct: 3943 cacttgccttccaggaagct 3962

>emb|AL929507.37| Zebrafish DNA sequence from clone DKEY-7C18 in linkage group 20, complete
              sequence
          Length = 214404

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 2      acgaaacaaatctcaccattcaca 25
              ||||||| ||||||||||||||||
Sbjct: 152925 acgaaactaatctcaccattcaca 152902

>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    tgcagcaaaagattgcaatg 295
              ||||||||||||||||||||
Sbjct: 224238 tgcagcaaaagattgcaatg 224219

>gb|AC174446.2| Mus musculus BAC clone RP23-356N23 from chromosome 6, complete sequence
          Length = 193034

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   ctagaatcccaagtgcccat 151
             ||||||||||||||||||||
Sbjct: 86289 ctagaatcccaagtgcccat 86270


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,805,985
Number of Sequences: 3902068
Number of extensions: 2805985
Number of successful extensions: 47374
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47340
Number of HSP's gapped (non-prelim): 34
length of query: 356
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 334
effective length of database: 17,147,199,772
effective search space: 5727164723848
effective search space used: 5727164723848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)