Clone Name | rbastl50b12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | dbj|AK042325.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... | 42 | 1.3 | 2 | emb|AL831735.10| Mouse DNA sequence from clone RP23-452D3 on chr... | 42 | 1.3 | 3 | dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... | 40 | 5.0 | 4 | dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic D... | 40 | 5.0 |
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>dbj|AK042325.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630082H19 product:ubiquitin conjugating enzyme 7 interacting protein 3, full insert sequence Length = 1536 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 caggtccagggacaggcacct 179 ||||||||||||||||||||| Sbjct: 217 caggtccagggacaggcacct 237
>emb|AL831735.10| Mouse DNA sequence from clone RP23-452D3 on chromosome 2, complete sequence Length = 193718 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 caggtccagggacaggcacct 179 ||||||||||||||||||||| Sbjct: 190055 caggtccagggacaggcacct 190035
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ccaccgacaccgcgaaaaac 287 |||||||||||||||||||| Sbjct: 19440316 ccaccgacaccgcgaaaaac 19440297
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409B11 Length = 168354 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 ccaccgacaccgcgaaaaac 287 |||||||||||||||||||| Sbjct: 129854 ccaccgacaccgcgaaaaac 129835 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,096,739 Number of Sequences: 3902068 Number of extensions: 3096739 Number of successful extensions: 52599 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52580 Number of HSP's gapped (non-prelim): 19 length of query: 378 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 356 effective length of database: 17,147,199,772 effective search space: 6104403118832 effective search space used: 6104403118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)