Clone Name | rbastl50b08 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_528522.1| PREDICTED: Pan troglodytes similar to XPMC2 prevents mitotic catastrophe 2 homolog; Xenopus prevents mitotic catastrophe 2 homolog (LOC473152), mRNA Length = 1542 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 aacaatatcaccatctgtcc 111 |||||||||||||||||||| Sbjct: 777 aacaatatcaccatctgtcc 758
>gb|AC116588.3| Mus musculus BAC clone RP23-448E6 from 9, complete sequence Length = 189927 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 taaggagcaatgtcgacagc 150 |||||||||||||||||||| Sbjct: 131822 taaggagcaatgtcgacagc 131841
>emb|CR860428.1| Pongo pygmaeus mRNA; cDNA DKFZp459I061 (from clone DKFZp459I061) Length = 3252 Score = 40.1 bits (20), Expect = 3.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 167 aggaggcgaaa-gctgcggttaaggaga 193 ||||||||||| |||||||||||||||| Sbjct: 100 aggaggcgaaaagctgcggttaaggaga 127
>gb|AC009560.10| Homo sapiens chromosome 15, clone RP11-219B17, complete sequence Length = 177308 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 acagcagcacctataaagtg 165 |||||||||||||||||||| Sbjct: 67976 acagcagcacctataaagtg 67995
>gb|AC018437.10| Homo sapiens chromosome 8, clone RP11-77B22, complete sequence Length = 192586 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cacctataaagtgcaggagg 172 |||||||||||||||||||| Sbjct: 51540 cacctataaagtgcaggagg 51559
>gb|AC102926.14| Mus musculus chromosome 3, clone RP24-237D17, complete sequence Length = 177195 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 taaggagaatgcccctgtct 205 |||||||||||||||||||| Sbjct: 15863 taaggagaatgcccctgtct 15844
>gb|AC087349.17| Homo sapiens chromosome 8, clone RP11-339A23, complete sequence Length = 96337 Score = 40.1 bits (20), Expect = 3.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 167 aggaggcgaaa-gctgcggttaaggaga 193 ||||||||||| |||||||||||||||| Sbjct: 60248 aggaggcgaaaagctgcggttaaggaga 60275
>dbj|BS000180.1| Pan troglodytes chromosome 22 clone:RP43-184I13, map 22, complete sequences Length = 158703 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 caaacaatatcaccatctgt 109 |||||||||||||||||||| Sbjct: 6724 caaacaatatcaccatctgt 6743
>gb|AC115004.14| Mus musculus chromosome 3, clone RP24-182K13, complete sequence Length = 141316 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 taaggagaatgcccctgtct 205 |||||||||||||||||||| Sbjct: 43555 taaggagaatgcccctgtct 43574
>dbj|AP001708.1| Homo sapiens genomic DNA, chromosome 21q, section 52/105 Length = 340000 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 caaacaatatcaccatctgt 109 |||||||||||||||||||| Sbjct: 183837 caaacaatatcaccatctgt 183856
>dbj|AP000567.2| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B41N19, SOD-AML region, complete sequence Length = 181283 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 caaacaatatcaccatctgt 109 |||||||||||||||||||| Sbjct: 144068 caaacaatatcaccatctgt 144087 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,113,011 Number of Sequences: 3902068 Number of extensions: 2113011 Number of successful extensions: 36147 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 36134 Number of HSP's gapped (non-prelim): 15 length of query: 264 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 242 effective length of database: 17,147,199,772 effective search space: 4149622344824 effective search space used: 4149622344824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)