ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl50b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RAS2_NEUCR (Q01387) Protein ras-2 28 8.8
2SPR6_YEAST (Q01684) Sporulation-specific protein (SPR6) 28 8.8

>RAS2_NEUCR (Q01387) Protein ras-2|
          Length = 229

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 102 LQLCRM*LKHFEGKYVCT*EDN*RKQIYVEKKSC 203
           +QLC   L+HF   Y  T ED+ RKQ+ ++ ++C
Sbjct: 26  IQLC---LEHFVETYDPTIEDSYRKQVVIDGQAC 56



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>SPR6_YEAST (Q01684) Sporulation-specific protein (SPR6)|
          Length = 191

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/55 (27%), Positives = 22/55 (40%)
 Frame = -1

Query: 243 GISDEPGLRCLTLNRIFFPHRFAFFSCLLRYTHICLQSVLITFCKVAAHYRMVFF 79
           G+  +PG RC       FP   A FSC       C  S    +  +A  +  ++F
Sbjct: 137 GVHPKPGERCACQQATLFPSPLARFSCDQSAVLGCAASSTRVYDSIADEFSSLYF 191


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,113,412
Number of Sequences: 219361
Number of extensions: 1192917
Number of successful extensions: 2239
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2237
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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