>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 82/99 (82%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                            
Query: 45       gataaatagtgaaatgtatgcttgatcactattggaaaaataccattctataatgtgctg 104
                ||||||||||||  | ||| ||||| |||||||||| || | |||| ||||||  | |||
Sbjct: 23529213 gataaatagtgaggtatatccttgagcactattggacaa-tgccatactataacttactg 23529271

                                                       
Query: 105      caactttgcagaatgtaattaaaacactttgaaggcaaa 143
                 |||||||||| |||||||| ||  ||||||||||||||
Sbjct: 23529272 gaactttgcaggatgtaattgaagtactttgaaggcaaa 23529310



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 308      tcaccgtaaatcctgcgaatagtaaacatgcgggtttatgtaacc 352
                ||||||||||| |||||||||||| ||    ||||||||||||||
Sbjct: 23529497 tcaccgtaaattctgcgaatagtagaccgatgggtttatgtaacc 23529541

>dbj|AK120756.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007B14, full
            insert sequence
          Length = 4434

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 82/99 (82%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                        
Query: 45   gataaatagtgaaatgtatgcttgatcactattggaaaaataccattctataatgtgctg 104
            ||||||||||||  | ||| ||||| |||||||||| || | |||| ||||||  | |||
Sbjct: 4410 gataaatagtgaggtatatccttgagcactattggacaa-tgccatactataacttactg 4352

                                                   
Query: 105  caactttgcagaatgtaattaaaacactttgaaggcaaa 143
             |||||||||| |||||||| ||  ||||||||||||||
Sbjct: 4351 gaactttgcaggatgtaattgaagtactttgaaggcaaa 4313



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 308  tcaccgtaaatcctgcgaatagtaaacatgcgggtttatgtaacc 352
            ||||||||||| |||||||||||| ||    ||||||||||||||
Sbjct: 4126 tcaccgtaaattctgcgaatagtagaccgatgggtttatgtaacc 4082

>dbj|AK100883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127M15, full
            insert sequence
          Length = 4644

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 82/99 (82%), Gaps = 1/99 (1%)
 Strand = Plus / Minus

                                                                        
Query: 45   gataaatagtgaaatgtatgcttgatcactattggaaaaataccattctataatgtgctg 104
            ||||||||||||  | ||| ||||| |||||||||| || | |||| ||||||  | |||
Sbjct: 4643 gataaatagtgaggtatatccttgagcactattggacaa-tgccatactataacttactg 4585

                                                   
Query: 105  caactttgcagaatgtaattaaaacactttgaaggcaaa 143
             |||||||||| |||||||| ||  ||||||||||||||
Sbjct: 4584 gaactttgcaggatgtaattgaagtactttgaaggcaaa 4546



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 308  tcaccgtaaatcctgcgaatagtaaacatgcgggtttatgtaacc 352
            ||||||||||| |||||||||||| ||    ||||||||||||||
Sbjct: 4359 tcaccgtaaattctgcgaatagtagaccgatgggtttatgtaacc 4315

>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21,
             complete sequence
          Length = 139298

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 82/99 (82%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                         
Query: 45    gataaatagtgaaatgtatgcttgatcactattggaaaaataccattctataatgtgctg 104
             ||||||||||||  | ||| ||||| |||||||||| || | |||| ||||||  | |||
Sbjct: 85116 gataaatagtgaggtatatccttgagcactattggacaa-tgccatactataacttactg 85174

                                                    
Query: 105   caactttgcagaatgtaattaaaacactttgaaggcaaa 143
              |||||||||| |||||||| ||  ||||||||||||||
Sbjct: 85175 gaactttgcaggatgtaattgaagtactttgaaggcaaa 85213



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 308   tcaccgtaaatcctgcgaatagtaaacatgcgggtttatgtaacc 352
             ||||||||||| |||||||||||| ||    ||||||||||||||
Sbjct: 85400 tcaccgtaaattctgcgaatagtagaccgatgggtttatgtaacc 85444

>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete
             sequence
          Length = 145590

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 357   ggaggctggacacgagacggggtgaga 383
             |||||||||||| ||||||||||||||
Sbjct: 43957 ggaggctggacatgagacggggtgaga 43983

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 357      ggaggctggacacgagacggggtgaga 383
                |||||||||||| ||||||||||||||
Sbjct: 22448710 ggaggctggacatgagacggggtgaga 22448736

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 357      ggaggctggacacgagacggggtgaga 383
                |||||||||||| ||||||||||||||
Sbjct: 22441739 ggaggctggacatgagacggggtgaga 22441765

>gb|AC101661.7| Mus musculus chromosome 1, clone RP23-26A10, complete sequence
          Length = 228933

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 150    tgtacctgagaagacaactaaagaaagcaa 179
              ||||||||| ||| ||||||||||||||||
Sbjct: 197470 tgtacctgacaaggcaactaaagaaagcaa 197441

>emb|AL645669.11| Mouse DNA sequence from clone RP23-26A10 on chromosome 1 Contains part of
              the gene for ortholog of human amyotrophic lateral
              sclerosis 2 (juvenile) chromosome region candidate 19
              (ALS2CR19), complete sequence
          Length = 228932

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 150    tgtacctgagaagacaactaaagaaagcaa 179
              ||||||||| ||| ||||||||||||||||
Sbjct: 197469 tgtacctgacaaggcaactaaagaaagcaa 197440

>gb|AC154590.2| Mus musculus BAC clone RP23-368L2 from chromosome 14, complete sequence
          Length = 168428

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 28     atattattggcttatttgataa 49
              ||||||||||||||||||||||
Sbjct: 115837 atattattggcttatttgataa 115858

>dbj|AK099564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M05, full
            insert sequence
          Length = 3444

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 106  aactttgcagaatgtaattaaaacactttgaaggcaaa 143
            |||||||||| |||||||| ||  ||||||||||||||
Sbjct: 3442 aactttgcaggatgtaattgaagtactttgaaggcaaa 3405



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 308  tcaccgtaaatcctgcgaatagtaaacatgcgggtttatgtaacc 352
            ||||||||||| |||||||||||| ||    ||||||||||||||
Sbjct: 3218 tcaccgtaaattctgcgaatagtagaccgatgggtttatgtaacc 3174

>emb|CT033773.8| Mouse DNA sequence from clone RP23-176M23 on chromosome 14, complete
              sequence
          Length = 133931

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 28     atattattggcttatttgataa 49
              ||||||||||||||||||||||
Sbjct: 126471 atattattggcttatttgataa 126450

>ref|XM_472831.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3720

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 308  tcaccgtaaatcctgcgaatagtaaacatgcgggtttatgtaacc 352
            ||||||||||| |||||||||||| ||    ||||||||||||||
Sbjct: 3720 tcaccgtaaattctgcgaatagtagaccgatgggtttatgtaacc 3676

>gb|AC163898.5| Mus musculus chromosome 7, clone RP24-108A5, complete sequence
          Length = 143726

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 115    gaatgtaattaaaacactttg 135
              |||||||||||||||||||||
Sbjct: 110534 gaatgtaattaaaacactttg 110514

>gb|AC006635.2| Caenorhabditis elegans cosmid F38G1, complete sequence
          Length = 24444

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 105   caactttgcagaatgtaattaaaac 129
             ||||||||||||||| |||||||||
Sbjct: 13211 caactttgcagaatgaaattaaaac 13235

>emb|Z83848.1|HS57A13 Human DNA sequence from clone RP1-57A13 on chromosome Xq24 Contains the
             5' end of the GRIA3 gene for glutamate receptor,
             ionotrophic, AMPA 3, the gene for a novel protein and a
             CpG island, complete sequence
          Length = 169693

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    ataccattctataatgtgctg 104
             |||||||||||||||||||||
Sbjct: 43831 ataccattctataatgtgctg 43811

>ref|NM_075705.3| Caenorhabditis elegans F38G1.1 (G-beta-repeats) mRNA, complete cds
          Length = 2414

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 105 caactttgcagaatgtaattaaaac 129
           ||||||||||||||| |||||||||
Sbjct: 62  caactttgcagaatgaaattaaaac 86

>gb|AC124696.5| Mus musculus BAC clone RP24-173I13 from chromosome 16, complete sequence
          Length = 187655

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 11     acttgccagtaattgtaatat 31
              |||||||||||||||||||||
Sbjct: 126037 acttgccagtaattgtaatat 126017

>gb|AC133081.4| Mus musculus BAC clone RP24-290O13 from chromosome 3, complete sequence
          Length = 180525

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 265    atctcattttcaagttctct 284
              ||||||||||||||||||||
Sbjct: 100629 atctcattttcaagttctct 100610

>ref|XM_643029.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (557.t00002)
           partial mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 201 tgttgagagtcagacatctt 220
           ||||||||||||||||||||
Sbjct: 125 tgttgagagtcagacatctt 106

>ref|XM_646196.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (172.t00002) partial mRNA
          Length = 2397

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 201 tgttgagagtcagacatctt 220
           ||||||||||||||||||||
Sbjct: 125 tgttgagagtcagacatctt 106

>ref|XM_649852.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (40.t00005) partial mRNA
          Length = 2784

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 201 tgttgagagtcagacatctt 220
           ||||||||||||||||||||
Sbjct: 125 tgttgagagtcagacatctt 106

>ref|XM_650868.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (20.t00003) partial mRNA
          Length = 1779

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 201 tgttgagagtcagacatctt 220
           ||||||||||||||||||||
Sbjct: 125 tgttgagagtcagacatctt 106

>gb|AC090099.14| Homo sapiens chromosome 11, clone RP11-113D6, complete sequence
          Length = 172939

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   tgagaagacaactaaagaaa 175
             ||||||||||||||||||||
Sbjct: 12740 tgagaagacaactaaagaaa 12759

>gb|AC113415.3| Homo sapiens chromosome 5 clone RP11-55N10, complete sequence
          Length = 170798

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   tttgcagaatgtaattaaaa 128
             ||||||||||||||||||||
Sbjct: 40956 tttgcagaatgtaattaaaa 40937

>gb|AC107948.7| Homo sapiens chromosome 11, clone RP11-81D23, complete sequence
          Length = 156839

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   tgagaagacaactaaagaaa 175
             ||||||||||||||||||||
Sbjct: 90888 tgagaagacaactaaagaaa 90907

>gb|AC026741.6| Homo sapiens chromosome 5 clone CTD-2653M23, complete sequence
          Length = 195849

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    attggaaaaataccattcta 94
             ||||||||||||||||||||
Sbjct: 58900 attggaaaaataccattcta 58919

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 45      gataaatagtgaaatgtatg 64
               ||||||||||||||||||||
Sbjct: 9514555 gataaatagtgaaatgtatg 9514536

>gb|AC020699.6| Homo sapiens BAC clone RP11-131K17 from 4, complete sequence
          Length = 186961

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   aaatctcattttcaagttct 282
             ||||||||||||||||||||
Sbjct: 15093 aaatctcattttcaagttct 15074

>gb|AC130462.3| Homo sapiens chromosome 16 clone CTA-67A1, complete sequence
          Length = 191594

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    ctgcaactttgcagaatgta 121
              ||||||||||||||||||||
Sbjct: 181616 ctgcaactttgcagaatgta 181635

>gb|AC005235.2| Homo sapiens BAC clone RP11-439M9 from 2, complete sequence
          Length = 197911

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   tctcattttcaagttctctt 285
             ||||||||||||||||||||
Sbjct: 47540 tctcattttcaagttctctt 47521

>gb|AC020978.10| Homo sapiens chromosome 16 clone RP11-96D1, complete sequence
          Length = 164293

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    ctgcaactttgcagaatgta 121
              ||||||||||||||||||||
Sbjct: 150919 ctgcaactttgcagaatgta 150900

>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0424A08
          Length = 151294

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    gataaatagtgaaatgtatg 64
             ||||||||||||||||||||
Sbjct: 47984 gataaatagtgaaatgtatg 47965

>gb|AC020655.10| Homo sapiens 3 BAC RP11-15B4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 145820

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    atcactattggaaaaatacc 88
             ||||||||||||||||||||
Sbjct: 26810 atcactattggaaaaatacc 26791

>emb|Z33352.1|MCAAO M.capricolum DNA for CONTIG MCAAO
          Length = 1629

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 160  aagacaactaaagaaagcaa 179
            ||||||||||||||||||||
Sbjct: 1408 aagacaactaaagaaagcaa 1427

>emb|AJ870302.1| Cucumis sativus mRNA for putative zinc finger protein (se1a12 gene)
          Length = 1274

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 tgcaactttgcagaatgtaa 122
           ||||||||||||||||||||
Sbjct: 202 tgcaactttgcagaatgtaa 221

>gb|AC153739.3| Aotus nancymaae clone CH258-485H7, complete sequence
          Length = 47312

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   acaaatctcattttcaagtt 280
             ||||||||||||||||||||
Sbjct: 36430 acaaatctcattttcaagtt 36411

>gb|AE016854.1| Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B, complete
             sequence
          Length = 67473

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    ctattggaaaaataccattc 92
             ||||||||||||||||||||
Sbjct: 36245 ctattggaaaaataccattc 36226


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,329,644
Number of Sequences: 3902068
Number of extensions: 4329644
Number of successful extensions: 85899
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85727
Number of HSP's gapped (non-prelim): 162
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)