Clone Name | rbastl50b05 |
---|---|
Clone Library Name | barley_pub |
>IPNS_STRCT (Q53932) Isopenicillin N synthetase (EC 1.21.3.1) (IPNS)| (Isopenicillin N synthase) Length = 321 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 10/72 (13%) Frame = -3 Query: 391 RQRWQVLRRGREVLEGW------LGLGRRVVDGG----EVQLGVGEQRSPWEAHGGERHQ 242 R + + R GRE +E W G ++ G EV + E+R P GE++ Sbjct: 87 RNGYYMARPGRETVESWCYLNPSFGEDHPMMKAGTPMHEVNVWPDEERHPDFGSFGEQYH 146 Query: 241 LQGLAVRLACCG 206 + A R CCG Sbjct: 147 REVSASRRCCCG 158
>LASS1_MOUSE (P27545) LAG1 longevity assurance homolog 1 (UOG-1 protein)| Length = 350 Score = 29.3 bits (64), Expect = 2.3 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Frame = -3 Query: 316 DGGEVQLGVGEQRSPWEAHGGERHQLQGLAVRLACCGFFSKMFVYGWL----FPVSKL 155 D +VQL + ++A GG H+L GL L C F F + W FP+ L Sbjct: 210 DVSDVQLEFTKLNIYFKARGGAYHRLHGLVANLGCLSF---CFCWFWFRLYWFPLKVL 264
>SYV_ONYPE (Q6YRJ6) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 882 Score = 29.3 bits (64), Expect = 2.3 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +2 Query: 260 VSFPWRTLLSDAELYFSSVDDATTKPEPTF 349 V FP + LSDA L S ++ ATT+PE F Sbjct: 204 VDFPTNSNLSDASLVPSFLEIATTRPETMF 233
>LASS1_HUMAN (P27544) LAG1 longevity assurance homolog 1 (UOG-1 protein) (LAG1| protein) Length = 350 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -3 Query: 316 DGGEVQLGVGEQRSPWEAHGGERHQLQGLAVRLACCGF-FSKMFVYGWLFPVSKL 155 D +VQL + +++ GG H+L LA L C F FS + + FP+ L Sbjct: 210 DISDVQLEFTKLNIYFKSRGGSYHRLHALAADLGCLSFGFSWFWFRLYWFPLKVL 264
>K1718_HUMAN (Q6ZMT4) Protein KIAA1718| Length = 941 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -1 Query: 219 LHAVVSSQKCLCMGGCFLY 163 +HAV++SQ C+ GG FL+ Sbjct: 353 IHAVLTSQDCMAFGGNFLH 371
>Y2077_ARCFU (O28202) Hypothetical protein AF2077 precursor| Length = 270 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +2 Query: 290 DAELYFSSVDDATTKPEPTFQY 355 D ELYFS+ +D T PTF Y Sbjct: 72 DVELYFSTPNDILTFSNPTFLY 93
>HEMH_VIBVU (Q8DFM2) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 319 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 403 AGGARQRWQVLRRGREVLEGWLGLGRRVVDGGEV 302 A RQ WQV +G +L + G+ +R D G+V Sbjct: 173 AESVRQSWQVQGKGDYLLCSYHGIPQRYADNGDV 206
>K1718_MOUSE (Q3UWM4) Protein KIAA1718| Length = 940 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -1 Query: 219 LHAVVSSQKCLCMGGCFLY 163 +HAV++SQ C+ GG FL+ Sbjct: 353 IHAVLTSQDCMAFGGNFLH 371
>PP2CD_HUMAN (O15297) Protein phosphatase 2C isoform delta (EC 3.1.3.16)| (PP2C-delta) (p53-induced protein phosphatase 1) (Protein phosphatase magnesium-dependent 1 delta) Length = 605 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%) Frame = +2 Query: 302 YFSSVDDATTKPEPTFQYFPSP----AQHLPPLP 391 Y V +PEPT + PSP +Q LPP P Sbjct: 20 YMEDVTQIVVEPEPTAEEKPSPRRSLSQPLPPRP 53
>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA (EC| 2.7.11.1) Length = 742 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +2 Query: 323 ATTKPEPTFQYFPSPAQHLPPLP 391 ATT P P+ P P H PP P Sbjct: 290 ATTSPNPSLAIEPPPPSHGPPRP 312
>DEGS_ECOLI (P0AEE3) Protease degS precursor (EC 3.4.21.-)| Length = 355 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = -3 Query: 379 QVLRRGREVLEGWLGLGRRVVDGGEVQLGVGEQRSPWEAHGGERHQLQGLAV 224 +++R GR V+ G++G+G G + +P A GG QLQG+ V Sbjct: 247 KLIRDGR-VIRGYIGIG-------------GREIAPLHAQGGGIDQLQGIVV 284
>DEGS_ECO57 (P0AEE4) Protease degS precursor (EC 3.4.21.-)| Length = 355 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = -3 Query: 379 QVLRRGREVLEGWLGLGRRVVDGGEVQLGVGEQRSPWEAHGGERHQLQGLAV 224 +++R GR V+ G++G+G G + +P A GG QLQG+ V Sbjct: 247 KLIRDGR-VIRGYIGIG-------------GREIAPLHAQGGGIDQLQGIVV 284 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,065,876 Number of Sequences: 219361 Number of extensions: 938540 Number of successful extensions: 3110 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2893 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3107 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)