Clone Name | rbastl50b04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | M3K10_HUMAN (Q02779) Mitogen-activated protein kinase kinase kin... | 28 | 7.0 | 2 | RPOC2_CYAPA (P48120) DNA-directed RNA polymerase beta'' chain (E... | 27 | 9.2 | 3 | EPS8_MOUSE (Q08509) Epidermal growth factor receptor kinase subs... | 27 | 9.2 |
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>M3K10_HUMAN (Q02779) Mitogen-activated protein kinase kinase kinase 10 (EC| 2.7.11.25) (Mixed lineage kinase 2) (Protein kinase MST) Length = 954 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/49 (36%), Positives = 23/49 (46%) Frame = +1 Query: 187 PHLTPWRLPRFGKKKRQEGPSSRTCTLRSSSPPAHKH*KLDCPDERADQ 333 P L PW+L FG + P SR T S PP+ + LD E +Q Sbjct: 894 PRLDPWKLVSFG-RTLTISPPSRPDTPESPGPPSVQPTLLDMDMEGQNQ 941
>RPOC2_CYAPA (P48120) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6)| (PEP) (Plastid-encoded RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit) Length = 1265 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/38 (36%), Positives = 24/38 (63%) Frame = +3 Query: 165 IKTNGPDSTLDSLAPSTLR*KEKTGRPQQSNLYTTVFF 278 ++TN + + S AP+T R KEKT R ++++ V+F Sbjct: 422 VETNDLLAEIASTAPNTRRAKEKTTRELRTDIAGEVYF 459
>EPS8_MOUSE (Q08509) Epidermal growth factor receptor kinase substrate 8| Length = 821 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/52 (28%), Positives = 25/52 (48%) Frame = +1 Query: 223 KKKRQEGPSSRTCTLRSSSPPAHKH*KLDCPDERADQFIHCTELQQYKYMFS 378 KK +++GP TLR+ PP D+F+ C Q++K+ F+ Sbjct: 304 KKSKRKGPGEGVLTLRAKPPP-------------PDEFVDC--FQKFKHGFN 340 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,598,478 Number of Sequences: 219361 Number of extensions: 1350460 Number of successful extensions: 2940 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2876 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2938 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)