ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl50b03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L08, full insert sequence Length = 3325 Score = 58.0 bits (29), Expect = 2e-05 Identities = 110/137 (80%) Strand = Plus / Minus Query: 296 catttcccatggcttttgttcactgaagtccttctcgccagcttgcagtttgaagctgct 355 ||||||||||||||| || ||||||| | |||||| || |||||| ||| | || | | Sbjct: 2910 catttcccatggcttctgctcactgatgcccttctggcgagcttgtggttaggagttaca 2851 Query: 356 tgatcatccatatttagcgaggccgcagattcagaccgcatggtttggttttgagactga 415 ||||||||||||| || |||||| || || ||||| ||||| | || ||||||| ||| Sbjct: 2850 tgatcatccatatataacgaggctgcggaatcagatcgcatagcatgattttgagcttga 2791 Query: 416 ccaagggactggaatgt 432 ||||| || |||||||| Sbjct: 2790 ccaagagattggaatgt 2774
>dbj|AK063754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-A04, full insert sequence Length = 577 Score = 58.0 bits (29), Expect = 2e-05 Identities = 110/137 (80%) Strand = Plus / Minus Query: 296 catttcccatggcttttgttcactgaagtccttctcgccagcttgcagtttgaagctgct 355 ||||||||||||||| || ||||||| | |||||| || |||||| ||| | || | | Sbjct: 485 catttcccatggcttctgctcactgatgcccttctggcgagcttgtggttaggagttaca 426 Query: 356 tgatcatccatatttagcgaggccgcagattcagaccgcatggtttggttttgagactga 415 ||||||||||||| || |||||| || || ||||| ||||| | || ||||||| ||| Sbjct: 425 tgatcatccatatataacgaggctgcggaatcagatcgcatagcatgattttgagcttga 366 Query: 416 ccaagggactggaatgt 432 ||||| || |||||||| Sbjct: 365 ccaagagattggaatgt 349
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 296 catttcccatggcttttgttcactgaagtccttctcgccagcttg 340 ||||||||||||||| || ||||||| | |||||| || |||||| Sbjct: 32288239 catttcccatggcttctgctcactgatgcccttctggcgagcttg 32288283
>emb|CR407546.16| Zebrafish DNA sequence from clone CH211-276E3 in linkage group 17, complete sequence Length = 103614 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 70924 ataaagacagtaaaatcactg 70944
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 296 catttcccatggcttttgttcactgaagtccttctcgccagcttg 340 ||||||||||||||| || ||||||| | |||||| || |||||| Sbjct: 22006 catttcccatggcttctgctcactgatgcccttctggcgagcttg 22050
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 gattattaacttgttttcttc 133 ||||||||||||||||||||| Sbjct: 38382 gattattaacttgttttcttc 38402
>emb|AL590149.9| Zebrafish DNA sequence from clone RP71-36D5 in linkage group 17 Contains the 3' part of a novel gene similar to KIAA0953, a novel gene similar to POMC (propiomelanocortin), a novel gene similar to FCN2 (ficolin 2), a novel gene similar to SNX9 (sorting nexin 9) and a CpG island, complete sequence Length = 167272 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 61152 ataaagacagtaaaatcactg 61172
>emb|AL645809.8| Mouse DNA sequence from clone RP23-402D13 on chromosome 11 Contains the 5' end of the Tisp78 gene for transcript increased in spermiogenesis 78, the Epn3 gene for epsin 3, the Mycbpap gene for mycbp associated protein, the gene for a novel protein (B430319G23Rik), the 5' end of the gene for a novel protein (9330162N21Rik) and the Chad gene for chondroadherin, complete sequence Length = 106815 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 ttgagactgaccaagggactg 426 ||||||||||||||||||||| Sbjct: 66705 ttgagactgaccaagggactg 66685
>emb|BX664744.10| Zebrafish DNA sequence from clone CH211-226F3 in linkage group 8, complete sequence Length = 3967 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 3034 ataaagacagtaaaatcactg 3054
>emb|BX511266.14| Zebrafish DNA sequence from clone CH211-245D7 in linkage group 14, complete sequence Length = 160419 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 142341 ataaagacagtaaaatcactg 142321
>emb|CR394529.7| Zebrafish DNA sequence from clone CH211-121F17 in linkage group 24, complete sequence Length = 75984 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 70189 ataaagacagtaaaatcactg 70209
>emb|CR626864.10| Zebrafish DNA sequence from clone DKEY-156N14 in linkage group 2, complete sequence Length = 173100 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 19038 ataaagacagtaaaatcactg 19058
>emb|CR405703.5| Zebrafish DNA sequence from clone DKEYP-52E4 in linkage group 5, complete sequence Length = 81891 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 26255 ataaagacagtaaaatcactg 26235
>emb|BX511253.13| Zebrafish DNA sequence from clone DKEY-45M5 in linkage group 8, complete sequence Length = 216373 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 1121 ataaagacagtaaaatcactg 1141
>emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, complete sequence Length = 135717 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 3010 ataaagacagtaaaatcactg 2990
>emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 in linkage group 3, complete sequence Length = 103014 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 49549 ataaagacagtaaaatcactg 49569
>emb|BX324146.10| Zebrafish DNA sequence from clone CH211-207C15 in linkage group 19, complete sequence Length = 230267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 224437 ataaagacagtaaaatcactg 224457
>gb|AC020925.8| Homo sapiens chromosome 5 clone CTD-2134K2, complete sequence Length = 161452 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 gcagcagcactgcatgtaaat 195 ||||||||||||||||||||| Sbjct: 144622 gcagcagcactgcatgtaaat 144602
>emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in linkage group 10, complete sequence Length = 179798 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 32637 ataaagacagtaaaatcactg 32657
>gb|AC010468.5|AC010468 Homo sapiens chromosome 5 clone CTD-2290C20, complete sequence Length = 122102 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 gcagcagcactgcatgtaaat 195 ||||||||||||||||||||| Sbjct: 47231 gcagcagcactgcatgtaaat 47251
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 296 catttcccatggcttttgttcactgaagtccttctcgccagcttg 340 ||||||||||||||| || ||||||| | |||||| || |||||| Sbjct: 32378749 catttcccatggcttctgctcactgatgcccttctggcgagcttg 32378793
>emb|BX088528.7| Zebrafish DNA sequence from clone CH211-226D23 in linkage group 1, complete sequence Length = 171618 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 153913 ataaagacagtaaaatcactg 153933
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 gattattaacttgttttcttc 133 ||||||||||||||||||||| Sbjct: 40171 gattattaacttgttttcttc 40191
>emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in linkage group 1, complete sequence Length = 169530 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 116724 ataaagacagtaaaatcactg 116704
>emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in linkage group 14, complete sequence Length = 195499 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 117972 ataaagacagtaaaatcactg 117952
>emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 in linkage group 17, complete sequence Length = 187548 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 5751 ataaagacagtaaaatcactg 5771
>emb|AL953910.14| Zebrafish DNA sequence from clone DKEY-31E10 in linkage group 1, complete sequence Length = 190793 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 181340 ataaagacagtaaaatcactg 181360
>emb|BX004829.12| Zebrafish DNA sequence from clone DKEY-29O15, complete sequence Length = 231581 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 4717 ataaagacagtaaaatcactg 4737
>emb|AL929299.10| Zebrafish DNA sequence from clone BUSM1-SL6, complete sequence Length = 72631 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 11886 ataaagacagtaaaatcactg 11866
>emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, complete sequence Length = 203360 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 155662 ataaagacagtaaaatcactg 155642
>gb|AC124180.5| Mus musculus BAC clone RP23-200I16 from 16, complete sequence Length = 199422 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 catttcccatggcttttgttc 316 ||||||||||||||||||||| Sbjct: 70597 catttcccatggcttttgttc 70617
>emb|AL935277.6| Zebrafish DNA sequence from clone CH211-250C16, complete sequence Length = 69315 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 30437 ataaagacagtaaaatcactg 30457
>gb|AC167240.5| Mus musculus BAC clone RP24-548A13 from chromosome 7, complete sequence Length = 218177 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gccaatctggagaacttggc 229 |||||||||||||||||||| Sbjct: 181004 gccaatctggagaacttggc 181023
>gb|AC123060.4| Mus musculus chromosome 6 clone RP23-214M22, complete sequence Length = 210248 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 32754 catgtttgggaagcaggtgg 32773
>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence Length = 211910 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 190626 catgtttgggaagcaggtgg 190645
>gb|AY229987.1| Cryptophlebia leucotreta granulovirus isolate CV3, complete genome Length = 110907 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactggaa 45 ||||||| |||||||||||||||| Sbjct: 46489 ataaagagagtaaaatcactggaa 46466
>ref|NM_133927.1| Mus musculus integrin alpha FG-GAP repeat containing 2 (Itfg2), mRNA Length = 2314 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 2114 catgtttgggaagcaggtgg 2095
>emb|BX908777.15| Zebrafish DNA sequence from clone CH211-133H13 in linkage group 11, complete sequence Length = 88152 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 25107 taaagacagtaaaatcactg 25126
>emb|CR387983.8| Zebrafish DNA sequence from clone DKEY-90D6 in linkage group 21, complete sequence Length = 131428 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 61144 ataaagacagtaaaatcact 61125
>gb|AC122436.4| Mus musculus BAC clone RP24-204P6 from chromosome 8, complete sequence Length = 189469 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 tcttcggatataaagacagtaaaatcac 40 ||||| |||||||| ||||||||||||| Sbjct: 40812 tcttctgatataaacacagtaaaatcac 40839
>emb|CR848031.5| Zebrafish DNA sequence from clone DKEY-288I10 in linkage group 14, complete sequence Length = 160671 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 123615 taaagacagtaaaatcactg 123596
>emb|X74443.2|RVNUCPROA Peste-des-petits-ruminants virus complete genome Length = 15948 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 caagggactggaatgtatca 436 |||||||||||||||||||| Sbjct: 1836 caagggactggaatgtatca 1855
>emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 in linkage group 13, complete sequence Length = 206656 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 87206 ataaagacagtaaaatcact 87225
>emb|Z97629.1|HS128N22 Human DNA sequence from clone RP1-128N22 on chromosome Xq25-26.3, complete sequence Length = 98902 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ttttgttcactgaagtcctt 328 |||||||||||||||||||| Sbjct: 87998 ttttgttcactgaagtcctt 87979
>gb|BC025492.1| Mus musculus integrin alpha FG-GAP repeat containing 2, mRNA (cDNA clone MGC:36400 IMAGE:5309950), complete cds Length = 2312 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 2121 catgtttgggaagcaggtgg 2102
>gb|BC014833.1| Mus musculus integrin alpha FG-GAP repeat containing 2, mRNA (cDNA clone MGC:25499 IMAGE:4507661), complete cds Length = 2314 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 2114 catgtttgggaagcaggtgg 2095
>emb|AL354920.21| Human DNA sequence from clone RP11-522I20 on chromosome 9 Contains a novel gene, the UBQLN1 gene for ubiquilin 1 (DA41, DSK2, XDRP1, PLIC-1), the 3' UTR of the gene for protein kinase anchoring protein GKAP42 (FKSG21) and two CpG islands, complete sequence Length = 168804 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 tggtttggttttgagactga 415 |||||||||||||||||||| Sbjct: 147735 tggtttggttttgagactga 147754
>emb|CR376827.6| Zebrafish DNA sequence from clone CH211-154C21 in linkage group 14, complete sequence Length = 110290 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 33521 ataaagacagtaaaatcact 33502
>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete sequence Length = 185915 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 117941 taaagacagtaaaatcactg 117960
>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23, complete sequence Length = 148736 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cagcaggcagcagcactgca 188 |||||||||||||||||||| Sbjct: 114351 cagcaggcagcagcactgca 114332
>emb|AJ298897.2|PDE298897 Peste-des-petits-ruminants virus mRNA for phosphoprotein (p gene) Length = 1655 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 caagggactggaatgtatca 436 |||||||||||||||||||| Sbjct: 89 caagggactggaatgtatca 108
>emb|CR550304.13| Zebrafish DNA sequence from clone CH211-150I13 in linkage group 13, complete sequence Length = 118999 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 64528 ataaagacagtaaaatcact 64547
>emb|CR847504.13| Zebrafish DNA sequence from clone DKEYP-51G9 in linkage group 4, complete sequence Length = 138906 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 110034 taaagacagtaaaatcactg 110053
>emb|CR354535.11| Zebrafish DNA sequence from clone CH211-199M16 in linkage group 25, complete sequence Length = 225139 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 ccatgcatgtttgggaagcaggtg 259 |||| ||||||||||||||||||| Sbjct: 88372 ccatccatgtttgggaagcaggtg 88395
>emb|CR384103.7| Zebrafish DNA sequence from clone DKEY-215K6 in linkage group 5, complete sequence Length = 142808 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 58143 ataaagacagtaaaatcact 58124
>emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in linkage group 9, complete sequence Length = 219065 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 140978 ataaagacagtaaaatcact 140959
>emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in linkage group 6, complete sequence Length = 220671 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 161662 taaagacagtaaaatcactg 161643
>emb|BX957239.7| Zebrafish DNA sequence from clone DKEY-173N20 in linkage group 19, complete sequence Length = 182432 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 3802 taaagacagtaaaatcactg 3783
>emb|BX294110.8| Zebrafish DNA sequence from clone DKEYP-19H3 in linkage group 25, complete sequence Length = 176023 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 ccatgcatgtttgggaagcaggtg 259 |||| ||||||||||||||||||| Sbjct: 131041 ccatccatgtttgggaagcaggtg 131018
>emb|CR450725.6| Zebrafish DNA sequence from clone CH211-5A14 in linkage group 5, complete sequence Length = 186721 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 130028 ataaagacagtaaaatcact 130009
>emb|BX890597.13| Zebrafish DNA sequence from clone DKEY-65F8, complete sequence Length = 244779 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 205246 ataaagacagtaaaatcact 205227
>emb|AL935031.12| Zebrafish DNA sequence from clone CH211-93I23, complete sequence Length = 178457 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 161112 ataaagacagtaaaatcact 161131
>emb|CR590856.1| full-length cDNA clone CS0DF019YB20 of Fetal brain of Homo sapiens (human) Length = 1576 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 316 cactgaagtccttctcgccagcttgcag 343 |||||||| ||||||| ||||||||||| Sbjct: 1173 cactgaagaccttctccccagcttgcag 1200
>emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in linkage group 16, complete sequence Length = 92059 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 2989 ataaagacagtaaaatcact 3008
>emb|BX005140.18| Zebrafish DNA sequence from clone CH211-11F22, complete sequence Length = 177312 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 96372 ataaagacagtaaaatcact 96391
>dbj|AK134630.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330505C02 product:Uncharacterized hematopoietic stem/progenitor cells protein MDS028 homolog [Homo sapiens], full insert sequence Length = 2317 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 2133 catgtttgggaagcaggtgg 2114
>dbj|AK147728.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270009J17 product:Uncharacterized hematopoietic stem/progenitor cells protein MDS028 homolog [Homo sapiens], full insert sequence Length = 2127 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 2115 catgtttgggaagcaggtgg 2096
>dbj|AK159637.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420026L14 product:Uncharacterized hematopoietic stem/progenitor cells protein MDS028 homolog [Homo sapiens], full insert sequence Length = 3185 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 3089 catgtttgggaagcaggtgg 3070
>emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in linkage group 11, complete sequence Length = 211986 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 107534 ataaagacagtaaaatcact 107515
>emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in linkage group 16, complete sequence Length = 256605 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 98567 taaagacagtaaaatcactg 98586
>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15, complete sequence Length = 134752 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 57143 ataaagacagtaaaatcact 57124
>gb|AC159005.3| Mus musculus BAC clone RP23-67F4 from chromosome 7, complete sequence Length = 230018 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gccaatctggagaacttggc 229 |||||||||||||||||||| Sbjct: 12674 gccaatctggagaacttggc 12693
>emb|BX571853.4| Zebrafish DNA sequence from clone DKEY-29H14 in linkage group 16, complete sequence Length = 191052 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 103829 taaagacagtaaaatcactg 103848
>ref|XM_393050.2| PREDICTED: Apis mellifera similar to importin alpha S2 (LOC409543), mRNA Length = 1986 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ttgcagtttgaagctgcttg 357 |||||||||||||||||||| Sbjct: 545 ttgcagtttgaagctgcttg 564
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cagcaggcagcagcactgca 188 |||||||||||||||||||| Sbjct: 20867526 cagcaggcagcagcactgca 20867507
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cagcaggcagcagcactgca 188 |||||||||||||||||||| Sbjct: 17439021 cagcaggcagcagcactgca 17439040
>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5, complete sequence Length = 160041 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 24135 taaagacagtaaaatcactg 24154
>emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in linkage group 4, complete sequence Length = 211817 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 52887 ataaagacagtaaaatcact 52868
>emb|BX649448.10| Zebrafish DNA sequence from clone DKEY-169I5 in linkage group 22, complete sequence Length = 184512 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 22678 ataaagacagtaaaatcact 22659
>emb|BX323807.8| Zebrafish DNA sequence from clone DKEY-154P10 in linkage group 2, complete sequence Length = 194313 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 77764 ataaagacagtaaaatcact 77783
>emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 in linkage group 12, complete sequence Length = 177468 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 160908 ataaagacagtaaaatcact 160927
>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0040H05 Length = 172623 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cagcaggcagcagcactgca 188 |||||||||||||||||||| Sbjct: 51018 cagcaggcagcagcactgca 51037
>emb|BX005267.7| Zebrafish DNA sequence from clone DKEY-46K2 in linkage group 19, complete sequence Length = 104035 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 9219 ataaagacagtaaaatcact 9200
>emb|AL845168.5| Zebrafish DNA sequence from clone DKEY-91M11, complete sequence Length = 198627 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 12937 ataaagacagtaaaatcact 12918
>emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, complete sequence Length = 267826 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 265392 ataaagacagtaaaatcact 265373
>emb|CR382336.11| Zebrafish DNA sequence from clone CH211-125A6 in linkage group 19, complete sequence Length = 175656 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 3195 ataaagacagtaaaatcact 3214
>emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in linkage group 4, complete sequence Length = 127818 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 17215 ataaagacagtaaaatcact 17196
>emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in linkage group 4, complete sequence Length = 228177 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 158969 ataaagacagtaaaatcact 158988
>emb|BX000529.13| Zebrafish DNA sequence from clone DKEY-191N2 in linkage group 3, complete sequence Length = 231807 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 155813 ataaagacagtaaaatcact 155794
>emb|BX004834.13| Zebrafish DNA sequence from clone CH211-42E22 in linkage group 18, complete sequence Length = 188895 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 105654 ataaagacagtaaaatcact 105673
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18, complete sequence Length = 248419 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 214669 ataaagacagtaaaatcact 214688
>emb|BX119962.3| Zebrafish DNA sequence from clone CH211-203L9 in linkage group 19, complete sequence Length = 190702 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 99197 taaagacagtaaaatcactg 99216
>emb|CR749179.8| Zebrafish DNA sequence from clone DKEY-33A13 in linkage group 11, complete sequence Length = 90503 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 33456 ataaagacagtaaaatcact 33475
>emb|CR318629.4| Zebrafish DNA sequence from clone DKEY-30I24 in linkage group 23, complete sequence Length = 89377 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 26738 ataaagacagtaaaatcact 26757
>emb|BX004853.7| Zebrafish DNA sequence from clone DKEY-13O11, complete sequence Length = 182526 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 135883 ataaagacagtaaaatcact 135864
>emb|BX001004.11| Zebrafish DNA sequence from clone DKEY-30N2 in linkage group 5, complete sequence Length = 82272 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 76618 ataaagacagtaaaatcact 76637
>dbj|AP001838.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-718B20, complete sequences Length = 211652 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 316 cactgaagtccttctcgccagcttgcag 343 |||||||| ||||||| ||||||||||| Sbjct: 71621 cactgaagaccttctccccagcttgcag 71594
>emb|CR555293.8| Zebrafish DNA sequence from clone DKEY-23P14 in linkage group 11, complete sequence Length = 220631 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 158653 ataaagacagtaaaatcact 158672
>emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in linkage group 12, complete sequence Length = 211571 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 167130 taaagacagtaaaatcactg 167149
>emb|CR925805.14| Zebrafish DNA sequence from clone DKEY-99N20 in linkage group 16, complete sequence Length = 180576 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 20534 ataaagacagtaaaatcact 20553
>emb|CR759813.6| Zebrafish DNA sequence from clone DKEY-150H10 in linkage group 18, complete sequence Length = 152902 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 122488 taaagacagtaaaatcactg 122507
>emb|AL954327.12| Zebrafish DNA sequence from clone DKEY-18H14 in linkage group 16, complete sequence Length = 237124 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 67469 taaagacagtaaaatcactg 67450
>emb|BX005063.7| Zebrafish DNA sequence from clone CH211-101D12, complete sequence Length = 24458 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 20964 taaagacagtaaaatcactg 20945
>emb|AL928828.6| Zebrafish DNA sequence from clone CH211-30I2, complete sequence Length = 169046 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 126149 ataaagacagtaaaatcact 126168
>gb|L25338.1|MUSFBP Mus musculus folate-binding protein gene, 5' end Length = 1565 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gccaatctggagaacttggc 229 |||||||||||||||||||| Sbjct: 582 gccaatctggagaacttggc 601 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,092,822 Number of Sequences: 3902068 Number of extensions: 4092822 Number of successful extensions: 84650 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84259 Number of HSP's gapped (non-prelim): 389 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
