ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl50a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLSX_PROMM (Q7V4F7) Fatty acid/phospholipid synthesis protein plsX 30 1.9
2NIN_HUMAN (Q8N4C6) Ninein (hNinein) 28 4.3
3MYX2_CROVC (P12029) Myotoxin-2 (Myotoxin II) 28 4.3
4KI13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like p... 28 4.3
5CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate... 28 5.6
6PLSX_PROMA (Q7VE56) Fatty acid/phospholipid synthesis protein plsX 28 5.6
7NFAC3_MOUSE (P97305) Nuclear factor of activated T-cells, cytopl... 28 5.6
8YG4U_YEAST (P53308) Hypothetical 11.9 kDa protein in DIE2-SMI1 i... 28 5.6
9YWV1_CAEEL (Q11075) Hypothetical protein B0403.1 28 5.6
10RNH2_PROMA (Q7VA11) Ribonuclease HII (EC 3.1.26.4) (RNase HII) 28 5.6
11TDRD7_HUMAN (Q8NHU6) Tudor domain-containing protein 7 (Tudor re... 28 5.6
12SECA_PAVLU (Q01570) Preprotein translocase secA subunit 28 7.3
13DDX27_HUMAN (Q96GQ7) Probable ATP-dependent RNA helicase DDX27 (... 28 7.3
14ATC3_SCHPO (P22189) Calcium-transporting ATPase 3 (EC 3.6.3.8) 27 9.5
15KLOTB_HUMAN (Q86Z14) Beta klotho (BetaKlotho) (Klotho beta-like ... 27 9.5
16HM14_CAEEL (P20271) Homeobox protein ceh-14 27 9.5
17PDR10_ARATH (Q7PC85) Probable pleiotropic drug resistance protei... 27 9.5
18RIM_CAEEL (Q22366) Rab-3-interacting molecule unc-10 (Rim) (Unco... 27 9.5
19PLSB_CAEEL (Q22949) Probable glycerol-3-phosphate acyltransferas... 27 9.5
20OTC_BUCBP (Q89AG1) Ornithine carbamoyltransferase (EC 2.1.3.3) (... 27 9.5

>PLSX_PROMM (Q7V4F7) Fatty acid/phospholipid synthesis protein plsX|
          Length = 448

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/54 (31%), Positives = 32/54 (59%)
 Frame = +1

Query: 133 KPQS*HRKHVWKRKSAQV*HLSW*ACNSCSYSGNVSAILSIRSSGKICAWRGAV 294
           +P++  R  +W R++A V  L   A NS S +GNV+  + + S+G + +  G++
Sbjct: 20  RPRAIRRLVIWYRRNAAVTSLVGSATNSASAAGNVAGTV-VSSAGSVVSNAGSM 72



to top

>NIN_HUMAN (Q8N4C6) Ninein (hNinein)|
          Length = 2090

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 57   VHHFIHEHKEQAEYLKQTTNKIEIMKAPKL 146
            VHH I E K++ +YL+  T  +E +KA ++
Sbjct: 1380 VHHVIEECKQENQYLEGNTQLLEKVKAHEI 1409



to top

>MYX2_CROVC (P12029) Myotoxin-2 (Myotoxin II)|
          Length = 43

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 330 HKTSGSFIDSEIYCTPPSADFAR 262
           HK  G     E  CTPPS+DF +
Sbjct: 5   HKKGGHCFPKEKICTPPSSDFGK 27



to top

>KI13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like protein RBKIN)|
          Length = 1805

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +3

Query: 69  IHEHKEQAEYLKQTTNKIEIMKAPKLT*KTCLEKKICTSLT 191
           I E +E+ E L++  ++ E MKAP+L  K    +K+   LT
Sbjct: 367 IRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELT 407



to top

>CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase|
           2)
          Length = 259

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
 Frame = -2

Query: 344 LDEMDIKQVVLSLIQKYTAPLQAQILPD----DLIERIAETFPEYEQ 216
           +++ D+K V  + ++K TA LQA    D    D +ERI E F  +++
Sbjct: 18  IEKDDLKDVAAAKVKKITAELQAASSSDSKSFDPVERIKEGFVTFKK 64



to top

>PLSX_PROMA (Q7VE56) Fatty acid/phospholipid synthesis protein plsX|
          Length = 436

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 16/54 (29%), Positives = 32/54 (59%)
 Frame = +1

Query: 133 KPQS*HRKHVWKRKSAQV*HLSW*ACNSCSYSGNVSAILSIRSSGKICAWRGAV 294
           +P++  R  +W R+++ V  L   A NS S +GNV+  + + S+G + +  G++
Sbjct: 11  RPKAIRRLVIWYRRNSAVTTLVDTATNSASAAGNVAGSV-VSSAGSVVSSAGSI 63



to top

>NFAC3_MOUSE (P97305) Nuclear factor of activated T-cells, cytoplasmic 3 (NF-ATc3)|
            (NFATc3) (T cell transcription factor NFAT4) (NF-AT4)
            (NFATx)
          Length = 1075

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +2

Query: 212  TAAHIQEMFLQFSQLGHLAKSALGGVQYISE--SMKEPLVLCPFHPGN 349
            T  H+Q M    S  G  A S+    Q   +  S  +P+  CP HPG+
Sbjct: 874  TPPHLQSMGYHCSNAGQTALSSPVADQITGQPSSHLQPITYCPSHPGS 921



to top

>YG4U_YEAST (P53308) Hypothetical 11.9 kDa protein in DIE2-SMI1 intergenic|
           region
          Length = 114

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = -3

Query: 232 FLNMSSCCMLTNLG--VRLVQIFFSKHVFYVSFGAFIISILFVVCFRYSACSLCSC 71
           FL +SS C+ T+       V   FS   F  +FG F  S L + C   +  +L SC
Sbjct: 32  FLFISSVCLFTSSSFFADSVTCSFSTCSFSSTFGCFSSSFLSLSCLMSTLSALISC 87



to top

>YWV1_CAEEL (Q11075) Hypothetical protein B0403.1|
          Length = 198

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 169 FSKHVFYVSFGAFIISILFVVCFRYSACSL 80
           F KH+ YVS  AF+     + CFR++  SL
Sbjct: 23  FQKHIEYVSNSAFLKCRQLLRCFRFTNVSL 52



to top

>RNH2_PROMA (Q7VA11) Ribonuclease HII (EC 3.1.26.4) (RNase HII)|
          Length = 191

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -2

Query: 290 APLQAQILPDDLIERIAETFPEY 222
           A + A++  DDLI+R+AE +P+Y
Sbjct: 134 ASVLAKVARDDLIKRMAEKYPQY 156



to top

>TDRD7_HUMAN (Q8NHU6) Tudor domain-containing protein 7 (Tudor repeat associator|
           with PCTAIRE 2) (Trap)
          Length = 1098

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 332 DIKQVVLSLIQKYTAPLQAQILPDDLIERIAETFPE 225
           D K+ V  L+ KYT+ L A  LP    E     FPE
Sbjct: 340 DFKEKVADLLVKYTSGLWASALPKAFEEMYKVKFPE 375



to top

>SECA_PAVLU (Q01570) Preprotein translocase secA subunit|
          Length = 891

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = -2

Query: 341 DEMDIKQVVLSLIQKYTAPLQAQILPDDLIERIAETF 231
           + +D+++++  L   YT P + +I  ++LIE I E+F
Sbjct: 539 NRLDVEELIDKLKSAYTVPEKNRIGVEELIENIDESF 575



to top

>DDX27_HUMAN (Q96GQ7) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)|
           (DEAD box protein 27)
          Length = 796

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/48 (27%), Positives = 30/48 (62%)
 Frame = -2

Query: 347 SLDEMDIKQVVLSLIQKYTAPLQAQILPDDLIERIAETFPEYEQLLHA 204
           SL   D ++++  +++   AP++A+ILP D+I +  +   + E+ ++A
Sbjct: 565 SLVGEDERKMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYA 612



to top

>ATC3_SCHPO (P22189) Calcium-transporting ATPase 3 (EC 3.6.3.8)|
          Length = 1037

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +2

Query: 161 FGKENLHKSNT*VGEHATAAHIQEMFLQF-SQLGHLAKSALGGVQYISE 304
           +GKE+L K+NT V E+   + I+ M + +  Q G     A G V+ I E
Sbjct: 480 YGKEDLLKTNTFVREYPFDSEIKRMAVIYEDQQGQYTVYAKGAVERILE 528



to top

>KLOTB_HUMAN (Q86Z14) Beta klotho (BetaKlotho) (Klotho beta-like protein)|
          Length = 1044

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 55  TMYYWDSPLLVDEKY 11
           T+Y+WD PL + EKY
Sbjct: 192 TLYHWDLPLALQEKY 206



to top

>HM14_CAEEL (P20271) Homeobox protein ceh-14|
          Length = 351

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -2

Query: 209 HAHQLRC*TCADFLFQTCFL 150
           H+  LRC TC D L  TCFL
Sbjct: 69  HSSCLRCSTCKDELGATCFL 88



to top

>PDR10_ARATH (Q7PC85) Probable pleiotropic drug resistance protein 10|
          Length = 1418

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 17/71 (23%), Positives = 33/71 (46%)
 Frame = -3

Query: 238 KHFLNMSSCCMLTNLGVRLVQIFFSKHVFYVSFGAFIISILFVVCFRYSACSLCSCMK*W 59
           KH+L ++ C  ++    R +      HV   + G   +++++++ F     S     K W
Sbjct: 632 KHYLVLALCGQMSYGLFRCIAAVTRNHVVSNTMGC--LAVMWLMTFSGYVLSRNQVHK-W 688

Query: 58  TTMYYWDSPLL 26
            T  YW SP++
Sbjct: 689 LTWAYWTSPMM 699



to top

>RIM_CAEEL (Q22366) Rab-3-interacting molecule unc-10 (Rim) (Uncoordinated|
           protein 10)
          Length = 1563

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/56 (21%), Positives = 27/56 (48%)
 Frame = +2

Query: 23  HQKWGIPVIHCSPSFHTRAQRTSRVSKTNNKQNRDNESPKANIENMFGKENLHKSN 190
           HQ+     +   P    +A + +++++  N+Q   N++   N  N  G +N  ++N
Sbjct: 238 HQQNNRRAMQQQPMSQNQANQINQMNQNQNQQQSHNQNMTQNQRNQTGPQNQQRTN 293



to top

>PLSB_CAEEL (Q22949) Probable glycerol-3-phosphate acyltransferase,|
           mitochondrial precursor (EC 2.3.1.15) (GPAT)
          Length = 718

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/54 (24%), Positives = 21/54 (38%)
 Frame = +2

Query: 2   KRMIFFIHQKWGIPVIHCSPSFHTRAQRTSRVSKTNNKQNRDNESPKANIENMF 163
           +R +      W IP+IH  P+       + RV +  +K    N+  K      F
Sbjct: 58  RRFLADFRYSWSIPLIHHYPNVEKDVLSSKRVHRVISKLKEQNDEQKNRAVQFF 111



to top

>OTC_BUCBP (Q89AG1) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)|
          Length = 339

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 11  IFFIHQKWGIPVIHCSPSFHTRAQRTSRVSKTNNKQNRDN 130
           +  + Q   I V+HC PSFH +   T    +  NK N DN
Sbjct: 260 MLLLTQNKKIKVLHCLPSFHDK--NTIVGEEIINKHNLDN 297


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,758,337
Number of Sequences: 219361
Number of extensions: 862100
Number of successful extensions: 2703
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2702
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top