>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)|
           (Fragments)
          Length = 368

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +2

Query: 35  RTLGHHYSSLLEKLNSWY*QEINMITPAANESMKKIWDGRRASI 166
           R LG  YSS     NSWY  + +   P   ES++K+W   R  I
Sbjct: 214 RVLG--YSS-----NSWYADQGSFEEPEGRESLQKLWQRYRVDI 250

>RPOB_CYAME (Q85FR7) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta subunit) (RNA
           polymerase beta subunit)
          Length = 1036

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 118 CWCNHVNFLSIP*VQLFK*ATVMMP*CSHDNRRR 17
           C  +HV++++I  +Q    AT ++P   HD+  R
Sbjct: 489 CDASHVDYMAISPIQFISAATCLIPFLEHDDANR 522


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,177,022
Number of Sequences: 219361
Number of extensions: 656127
Number of successful extensions: 1688
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1688
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)