>MHPD_ECOLI (P77608) 2-keto-4-pentenoate hydratase (EC 4.2.1.-)|
           (2-hydroxypentadienoic acid hydratase)
          Length = 269

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 99  EHIIPRIAVNGNQIQDWNFNLPNKVASQLSC 7
           E ++P + V G++I+DW+    + VA   SC
Sbjct: 131 EWVLPALEVVGSRIRDWSIQFVDTVADNASC 161

>SYK2_MYCTU (P94974) Putative lysyl-tRNA synthetase 2 (EC 6.1.1.6)|
           (Lysine--tRNA ligase 2) (LysRS 2)
          Length = 1172

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 96  VLPLQRRNAVHKGHRP 143
           VLP  RRN VH GH P
Sbjct: 628 VLPFSRRNRVHTGHHP 643

>SYK2_MYCBO (Q7VEV7) Putative lysyl-tRNA synthetase 2 (EC 6.1.1.6)|
           (Lysine--tRNA ligase 2) (LysRS 2)
          Length = 1172

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 96  VLPLQRRNAVHKGHRP 143
           VLP  RRN VH GH P
Sbjct: 628 VLPFSRRNRVHTGHHP 643

>XYLJ_PSEPU (P23107) 2-hydroxypent-2,4-dienoate hydratase (EC 4.2.-.-) (HPH)|
           (2-oxopent-4-enoate hydratase)
          Length = 222

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 99  EHIIPRIAVNGNQIQDWNFNLPNKVASQLSC 7
           E +IP   V  ++IQDW   + + VA   SC
Sbjct: 132 ECVIPCFEVVDSRIQDWKIKIQDTVADNASC 162

>SYM_SULTO (Q971C1) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 571

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
 Frame = -1

Query: 180 ENYIHCFSPKL--NKVCVLCGLRFFFVEAEHIIPRIAVNGNQIQDWNFN---LPNKVAS 19
           +N     +P+L  N  CVLCG    F + +H    ++   ++I++W  N   LP  V S
Sbjct: 157 DNCGRLLTPRLLVNPKCVLCGRTPVFKKTKHWFFDLSAFNDKIEEWIKNSQTLPENVKS 215

>SYM_THEVO (Q979B7) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 543

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = -1

Query: 150 LNKVCVLCGLRFFFVEAEHIIPRIAVNGNQIQDW----NFNLPNKVA 22
           +N VC+L G    F E EH   R+ +   ++++W     F  PN +A
Sbjct: 171 INPVCILSGETPEFRETEHFFLRLDLFEERLEEWLKTKTFWKPNVLA 217

>N4BM_HUMAN (O95298) NADH-ubiquinone oxidoreductase subunit B14.5b (EC 1.6.5.3)|
           (EC 1.6.99.3) (Complex I-B14.5b) (CI-B14.5b)
          Length = 119

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = -3

Query: 220 LVRKRDYIYAIRRRELY 170
           LV++ DY+YA+R RE++
Sbjct: 74  LVKREDYLYAVRDREMF 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,814,717
Number of Sequences: 219361
Number of extensions: 718675
Number of successful extensions: 1962
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1962
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)