>Y368_LISMO (Q8Y9Z9) Putative Nudix hydrolase lmo0368 (EC 3.6.-.-)|
          Length = 169

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 69  EFLPMFFCTYLFSLKNAQKLH 7
           EF+P FF   LF+LKNA  +H
Sbjct: 148 EFIPYFFLNQLFNLKNATTIH 168

>VGLG_BRSV4 (O10684) Major surface glycoprotein G (Attachment glycoprotein G)|
          Length = 263

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 22/56 (39%), Positives = 30/56 (53%)
 Frame = +3

Query: 57  WEGTHSSIQRTKASQPIFSQTRSATSTKAT*NRVFTNHPKEAAITTPIDKATRNQP 224
           ++ TH+SIQ T  SQP    T S T+     NR  T + K  + +TP+  ATR  P
Sbjct: 96  YKSTHTSIQSTTLSQPPNIDTTSGTTYGHPTNR--TQNRKIKSQSTPL--ATRKPP 147

>VGLG_BRSV1 (O10683) Major surface glycoprotein G (Attachment glycoprotein G)|
          Length = 263

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 22/56 (39%), Positives = 30/56 (53%)
 Frame = +3

Query: 57  WEGTHSSIQRTKASQPIFSQTRSATSTKAT*NRVFTNHPKEAAITTPIDKATRNQP 224
           ++ TH+SIQ T  SQP    T S T+     NR  T + K  + +TP+  ATR  P
Sbjct: 96  YKSTHTSIQSTTLSQPPNIDTTSGTTYGHPTNR--TQNRKIKSQSTPL--ATRKPP 147

>Y387_LISIN (Q92ES1) Putative Nudix hydrolase lin0387 (EC 3.6.-.-)|
          Length = 169

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3

Query: 69  EFLPMFFCTYLFSLKNAQKLH 7
           EF+P FF   LF LKNA  +H
Sbjct: 148 EFIPYFFLNQLFELKNATTIH 168

>DNM3B_HUMAN (Q9UBC3) DNA (cytosine-5)-methyltransferase 3B (EC 2.1.1.37)|
           (Dnmt3b) (DNA methyltransferase HsaIIIB) (DNA MTase
           HsaIIIB) (M.HsaIIIB)
          Length = 853

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 15/60 (25%), Positives = 30/60 (50%)
 Frame = +3

Query: 42  MYRKTWEGTHSSIQRTKASQPIFSQTRSATSTKAT*NRVFTNHPKEAAITTPIDKATRNQ 221
           ++R+T   + S   RT+ +  + S+ R   S ++T  R   NH  E+ +  P  ++ R +
Sbjct: 90  LFRETRTRSESPAVRTRNNNSVSSRERHRPSPRSTRGRQGRNHVDESPVEFPATRSLRRR 149

>CXI8_CONRA (Q7Z091) I-superfamily conotoxin R11.8 (r11d)|
          Length = 41

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 215 PCSFIDRCCNCCL 177
           PCS+   CCNCCL
Sbjct: 8   PCSYHADCCNCCL 20

>CXI17_CONRA (Q7Z093) I-superfamily conotoxin R11.17|
          Length = 46

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 215 PCSFIDRCCNCCL 177
           PCS+   CCNCCL
Sbjct: 11  PCSYHADCCNCCL 23

>CXI14_CONRA (Q7Z092) I-superfamily conotoxin R11.14 (r11b)|
          Length = 46

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 215 PCSFIDRCCNCCL 177
           PCS+   CCNCCL
Sbjct: 11  PCSYHADCCNCCL 23

>PARM1_RAT (Q6P9X9) Protein PARM-1 precursor (Prostatic androgen-repressed|
           message 1 protein) (Castration-induced prostatic
           apoptosis-related protein 1) (CIPAR-1)
          Length = 296

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +3

Query: 54  TWEGTHSSIQRTKASQPIFSQTRSAT---STKAT*NRVFTNHPKEAAITTP 197
           TW  T S+     A+ P+ S T +A+   +T A+       HP+E A+T+P
Sbjct: 41  TW--TTSAQHTAMATTPVASATHNASVLRTTAASLTSQLPTHPREEAVTSP 89

>METE_RALSO (Q8XS05) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 776

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 46  TEKHGKELIAAFREQKHHNQYSPRPDQLHRPKLHRIE 156
           T +   EL+ AF E  + N+  P    +H P++ R+E
Sbjct: 667 TSRSNMELLDAFGEFAYPNEIGPGVYDIHSPRVPRVE 703

>CXI7_CONRA (Q7Z095) I-superfamily conotoxin R11.7|
          Length = 46

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 215 PCSFIDRCCNCCL 177
           PC +   CCNCCL
Sbjct: 11  PCEYHSDCCNCCL 23

>YP96_CAEEL (Q09476) Hypothetical protein C28H8.6 in chromosome III|
          Length = 256

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +1

Query: 49  EKHGKELIAAFREQKHHNQYSPRPDQLHRPKLHRIECSPIIQKRQQLQ 192
           E++G+    AF E+ +HNQ+SP+    HR    R  C  ++ K   ++
Sbjct: 59  ERNGR----AFCEEDYHNQFSPKCQGCHRAITDR--CVSVMNKNFHIE 100

>VTDB_RAT (P04276) Vitamin D-binding protein precursor (DBP) (Group-specific|
           component) (Gc-globulin) (VDB)
          Length = 476

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 11/18 (61%), Positives = 12/18 (66%), Gaps = 2/18 (11%)
 Frame = -3

Query: 87  FSECCYEFLPM--FFCTY 40
           F ECCYE  PM  F C+Y
Sbjct: 296 FEECCYETTPMGIFMCSY 313


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,788,761
Number of Sequences: 219361
Number of extensions: 556645
Number of successful extensions: 1759
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1759
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)