Clone Name | rbastl47g11 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.16 Identities = 118/146 (80%), Gaps = 8/146 (5%) Strand = Plus / Plus Query: 60 taatacaatgaaagcaagatgcttatcacgacaaatgactacacaatc-aaagcataagg 118 ||||||| |||||||||||||||| ||| ||| ||||||| | || | ||||||||| Sbjct: 34633657 taatacagtgaaagcaagatgcttggcactacagatgactaaataagctaaagcataaac 34633716 Query: 119 acagtaca--tattttacatgtc----acatgatgcacgcaataaacagacagactatga 172 | |||||| ||| ||||||||| ||||||||||| | ||||| ||| || |||||| Sbjct: 34633717 atagtacaaatatattacatgtcgatcacatgatgcacacgataaatagatag-ctatga 34633775 Query: 173 caagtacctccaatgggctggacggt 198 || |||||||| || |||||||||| Sbjct: 34633776 cagatacctccattgtgctggacggt 34633801
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 44.1 bits (22), Expect = 0.16 Identities = 118/146 (80%), Gaps = 8/146 (5%) Strand = Plus / Plus Query: 60 taatacaatgaaagcaagatgcttatcacgacaaatgactacacaatc-aaagcataagg 118 ||||||| |||||||||||||||| ||| ||| ||||||| | || | ||||||||| Sbjct: 144597 taatacagtgaaagcaagatgcttggcactacagatgactaaataagctaaagcataaac 144656 Query: 119 acagtaca--tattttacatgtc----acatgatgcacgcaataaacagacagactatga 172 | |||||| ||| ||||||||| ||||||||||| | ||||| ||| || |||||| Sbjct: 144657 atagtacaaatatattacatgtcgatcacatgatgcacacgataaatagatag-ctatga 144715 Query: 173 caagtacctccaatgggctggacggt 198 || |||||||| || |||||||||| Sbjct: 144716 cagatacctccattgtgctggacggt 144741
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 44.1 bits (22), Expect = 0.16 Identities = 118/146 (80%), Gaps = 8/146 (5%) Strand = Plus / Plus Query: 60 taatacaatgaaagcaagatgcttatcacgacaaatgactacacaatc-aaagcataagg 118 ||||||| |||||||||||||||| ||| ||| ||||||| | || | ||||||||| Sbjct: 100272 taatacagtgaaagcaagatgcttggcactacagatgactaaataagctaaagcataaac 100331 Query: 119 acagtaca--tattttacatgtc----acatgatgcacgcaataaacagacagactatga 172 | |||||| ||| ||||||||| ||||||||||| | ||||| ||| || |||||| Sbjct: 100332 atagtacaaatatattacatgtcgatcacatgatgcacacgataaatagatag-ctatga 100390 Query: 173 caagtacctccaatgggctggacggt 198 || |||||||| || |||||||||| Sbjct: 100391 cagatacctccattgtgctggacggt 100416
>gb|AC163445.3| Mus musculus chromosome 3, clone RP24-304A4, complete sequence Length = 175181 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ggaacaaaacaagatacaata 22 ||||||||||||||||||||| Sbjct: 162642 ggaacaaaacaagatacaata 162622
>gb|AY181204.1| Oryza sativa (japonica cultivar-group) cultivar Norin 8 genomic sequence Length = 8138 Score = 42.1 bits (21), Expect = 0.63 Identities = 36/41 (87%) Strand = Plus / Plus Query: 60 taatacaatgaaagcaagatgcttatcacgacaaatgacta 100 ||||||| |||||||||||||||| ||| ||| ||||||| Sbjct: 7990 taatacagtgaaagcaagatgcttggcactacagatgacta 8030
>gb|AY181203.1| Oryza sativa (japonica cultivar-group) cultivar Norin 8m genomic sequence Length = 8103 Score = 42.1 bits (21), Expect = 0.63 Identities = 36/41 (87%) Strand = Plus / Plus Query: 60 taatacaatgaaagcaagatgcttatcacgacaaatgacta 100 ||||||| |||||||||||||||| ||| ||| ||||||| Sbjct: 7955 taatacagtgaaagcaagatgcttggcactacagatgacta 7995
>gb|AC115693.9| Mus musculus chromosome 3, clone RP24-94P3, complete sequence Length = 175734 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ggaacaaaacaagatacaata 22 ||||||||||||||||||||| Sbjct: 79463 ggaacaaaacaagatacaata 79443
>gb|AC131714.4| Mus musculus BAC clone RP23-179L6 from chromosome 18, complete sequence Length = 193005 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 acaatgaaagcaagatgcttatca 87 ||||||||| |||||||||||||| Sbjct: 38145 acaatgaaatcaagatgcttatca 38122
>gb|AC124580.5| Mus musculus BAC clone RP23-114G7 from chromosome 12, complete sequence Length = 176245 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 gaacaaaacaagatacaata 22 |||||||||||||||||||| Sbjct: 138923 gaacaaaacaagatacaata 138904
>gb|AC122340.3| Mus musculus BAC clone RP23-354B8 from 15, complete sequence Length = 183991 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 gaacaaaacaagatacaatagaca 26 |||||||| ||||||||||||||| Sbjct: 164615 gaacaaaagaagatacaatagaca 164592
>gb|AC116465.8| Mus musculus chromosome 10, clone RP23-64J3, complete sequence Length = 237801 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaatag 23 |||||||||||||||||||| Sbjct: 34233 aacaaaacaagatacaatag 34214
>emb|Z97205.1|HS155D22 Human DNA sequence from clone RP1-155D22 on chromosome 6q27 Contains a novel gene, complete sequence Length = 148851 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 gaacaaaacaagatacaata 22 |||||||||||||||||||| Sbjct: 136086 gaacaaaacaagatacaata 136105
>gb|AC165083.2| Mus musculus BAC clone RP23-411I6 from chromosome 18, complete sequence Length = 208109 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 acaatgaaagcaagatgcttatca 87 ||||||||| |||||||||||||| Sbjct: 95084 acaatgaaatcaagatgcttatca 95107
>gb|AC149579.11| Medicago truncatula clone mth2-99d8, complete sequence Length = 111010 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 atattttacatgtcacatga 145 |||||||||||||||||||| Sbjct: 55232 atattttacatgtcacatga 55251
>emb|BX649536.8| Zebrafish DNA sequence from clone DKEY-21N8 in linkage group 3, complete sequence Length = 203180 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 atgactacacaatcaaagca 113 |||||||||||||||||||| Sbjct: 146040 atgactacacaatcaaagca 146059
>dbj|AB025630.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA22 Length = 51436 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaatag 23 |||||||||||||||||||| Sbjct: 47743 aacaaaacaagatacaatag 47762
>emb|CR388132.9| Zebrafish DNA sequence from clone DKEY-23A23 in linkage group 4, complete sequence Length = 206525 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 tgcacgcaataaacagacag 165 |||||||||||||||||||| Sbjct: 199858 tgcacgcaataaacagacag 199877
>gb|AC153933.3| Mus musculus 10 BAC RP24-282I24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179847 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaatag 23 |||||||||||||||||||| Sbjct: 136481 aacaaaacaagatacaatag 136462
>gb|AC154269.1| Mus musculus BAC clone RP24-259B17 from 13, complete sequence Length = 170931 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 gaacaaaacaagatacaata 22 |||||||||||||||||||| Sbjct: 84534 gaacaaaacaagatacaata 84515
>gb|AC124711.3| Mus musculus BAC clone RP24-100M12 from 12, complete sequence Length = 225134 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 gaacaaaacaagatacaata 22 |||||||||||||||||||| Sbjct: 19240 gaacaaaacaagatacaata 19221
>emb|AL672193.10| Mouse DNA sequence from clone RP23-443O18 on chromosome X, complete sequence Length = 210236 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 gaacaaaacaagatacaata 22 |||||||||||||||||||| Sbjct: 58298 gaacaaaacaagatacaata 58317
>gb|AC137970.10| Mus musculus chromosome 3, clone RP23-438E13, complete sequence Length = 212827 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 58574 aacaaaacaagatacaata 58556
>gb|AC166163.3| Mus musculus BAC clone RP23-444G9 from chromosome 17, complete sequence Length = 171447 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 169879 aacaaaacaagatacaata 169861
>ref|NM_197203.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0078O01.8), mRNA Length = 1619 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 107 caaagcataaggacagtacatat 129 ||||||||| ||||||||||||| Sbjct: 1598 caaagcatacggacagtacatat 1576
>gb|AC158779.4| Mus musculus chromosome 15, clone RP23-258P17, complete sequence Length = 203163 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 60834 aacaaaacaagatacaata 60816
>gb|AC102196.7| Mus musculus chromosome 3, clone RP24-445M20, complete sequence Length = 166532 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 7005 aacaaaacaagatacaata 7023
>ref|NM_199040.2| Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 4 (NUDT4), transcript variant 2, mRNA Length = 4813 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 3126 gtacatattttacatgtca 3108
>ref|NM_019094.4| Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 4 (NUDT4), transcript variant 1, mRNA Length = 4810 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 3123 gtacatattttacatgtca 3105
>gb|BC012069.1| Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 4, transcript variant 2, mRNA (cDNA clone MGC:19931 IMAGE:4650281), complete cds Length = 3652 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 2917 gtacatattttacatgtca 2899
>gb|AC161509.8| Mus musculus chromosome 7, clone RP23-53O17, complete sequence Length = 196638 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 25436 aacaaaacaagatacaata 25418
>gb|AC125014.8| Mus musculus chromosome 16, clone RP24-149C21, complete sequence Length = 177471 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 157515 aacaaaacaagatacaata 157533
>gb|AC120856.6| Mus musculus chromosome 1, clone RP23-284B21, complete sequence Length = 261249 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 200029 aacaaaacaagatacaata 200011
>gb|AC121097.6| Mus musculus chromosome 13, clone RP24-449F13, complete sequence Length = 217251 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 gaacaaaacaagatacaat 21 ||||||||||||||||||| Sbjct: 72094 gaacaaaacaagatacaat 72112
>gb|AC134335.2| Mus musculus BAC clone RP24-150I18 from chromosome 15, complete sequence Length = 166926 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 gaacaaaacaagatacaatagac 25 ||||||||||||| ||||||||| Sbjct: 66450 gaacaaaacaagacacaatagac 66428
>gb|AC140194.2| Mus musculus BAC clone RP23-250K1 from chromosome 16, complete sequence Length = 183155 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 126862 aacaaaacaagatacaata 126844
>gb|AC122453.4| Mus musculus BAC clone RP24-258A18 from chromosome 17, complete sequence Length = 177389 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 129254 aacaaaacaagatacaata 129272
>emb|CR388017.7| Zebrafish DNA sequence from clone CH211-283H24 in linkage group 7, complete sequence Length = 111978 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 119 acagtacatattttacatg 137 ||||||||||||||||||| Sbjct: 82907 acagtacatattttacatg 82925
>gb|AC127323.3| Mus musculus BAC clone RP23-242D19 from 18, complete sequence Length = 208152 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 177 tacctccaatgggctggac 195 ||||||||||||||||||| Sbjct: 63835 tacctccaatgggctggac 63817
>gb|AC122812.4| Mus musculus BAC clone RP23-285M9 from 1, complete sequence Length = 208430 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 163404 gtacatattttacatgtca 163386
>gb|AC117226.3| Mus musculus BAC clone RP23-377C22 from 13, complete sequence Length = 169858 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 gaacaaaacaagatacaat 21 ||||||||||||||||||| Sbjct: 124015 gaacaaaacaagatacaat 124033
>gb|AC116328.3| Mus musculus BAC clone RP24-131I17 from 15, complete sequence Length = 149291 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 34770 aacaaaacaagatacaata 34788
>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete sequence Length = 146664 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 107 caaagcataaggacagtacatat 129 ||||||||| ||||||||||||| Sbjct: 82666 caaagcatacggacagtacatat 82644
>gb|AC098737.3| Mus musculus BAC clone RP23-122D16 from 1, complete sequence Length = 212615 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 162826 gtacatattttacatgtca 162844
>gb|AC116709.4| Mus musculus chromosome 1, clone RP23-91L14, complete sequence Length = 188848 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 acaaaacaagatacaatag 23 ||||||||||||||||||| Sbjct: 185380 acaaaacaagatacaatag 185362 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 143222 aacaaaacaagatacaata 143204
>gb|AC025260.29| Homo sapiens 12 BAC RP11-356O22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164872 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 160210 gtacatattttacatgtca 160228
>emb|AL596132.7| Human DNA sequence from clone RP11-30A1 on chromosome 9 Contains part of the NTRK2 gene for Neurotrophic tyrosine kinase, receptor, type 2 (TRKB), complete sequence Length = 124156 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 120 cagtacatattttacatgt 138 ||||||||||||||||||| Sbjct: 64896 cagtacatattttacatgt 64878
>emb|AL359758.15| Human DNA sequence from clone RP11-544O24 on chromosome 1 Contains the 3' end of a SEC22 vesicle trafficking protein-like 1 (S. cerevisiae) (SEC22L1) pseudogene and a nudix (nucleoside diphosphate linked moiety X)-type motif 4 (NUDT4) pseudogene, complete sequence Length = 79661 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 39747 gtacatattttacatgtca 39765
>emb|AL359734.13| Human DNA sequence from clone RP11-69O16 on chromosome Xp11.4-21.2 Contains the gene for a novel protein similar to seven in absentia homolog 1 (Drosophila) (SIAH1) and a CpG island, complete sequence Length = 89948 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 gaacaaaacaagatacaat 21 ||||||||||||||||||| Sbjct: 73387 gaacaaaacaagatacaat 73405
>gb|AC164076.3| Mus musculus chromosome 1, clone RP24-287C18, complete sequence Length = 185185 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 acaaaacaagatacaatag 23 ||||||||||||||||||| Sbjct: 69244 acaaaacaagatacaatag 69226 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 27086 aacaaaacaagatacaata 27068
>emb|AL138767.15| Human DNA sequence from clone RP11-57C13 on chromosome 10 Contains the 3' end of the MINPP gene for multiple inositol polyphosphate histidine phosphatase 1, three novel genes, a ribosomal protein S26 (RPS26) pseudogene, the 5' end of the PAPSS2 gene for 3'-phosphoadenosine 5'-phosphosulfate synthase 2 and a CpG island, complete sequence Length = 111645 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 156 aaacagacagactatgacaagta 178 |||||||||||| |||||||||| Sbjct: 51302 aaacagacagacaatgacaagta 51280
>gb|AC157795.4| Mus musculus chromosome 1, clone RP24-122B24, complete sequence Length = 158636 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 41858 aacaaaacaagatacaata 41840
>emb|CR859067.1| Pongo pygmaeus mRNA; cDNA DKFZp459I121 (from clone DKFZp459I121) Length = 3540 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 2773 gtacatattttacatgtca 2755
>emb|BX571708.4| Zebrafish DNA sequence from clone DKEYP-74B2, complete sequence Length = 193197 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 118 gacagtacatattttacat 136 ||||||||||||||||||| Sbjct: 16804 gacagtacatattttacat 16786
>emb|BX571773.12| Zebrafish DNA sequence from clone DKEY-174K1 in linkage group 6, complete sequence Length = 135439 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 7 aaaacaagatacaatagacataa 29 |||||||||||||||||| |||| Sbjct: 82341 aaaacaagatacaatagaaataa 82363
>emb|CR749445.1| Homo sapiens mRNA; cDNA DKFZp686I1281 (from clone DKFZp686I1281) Length = 3574 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 2840 gtacatattttacatgtca 2822
>emb|CR602956.1| full-length cDNA clone CS0DI019YO01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1390 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 688 gtacatattttacatgtca 670
>gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, complete sequence Length = 190848 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 91846 aacaaaacaagatacaata 91828
>gb|AC044782.6| Homo sapiens chromosome 10 clone RP11-170M17, complete sequence Length = 149041 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 118346 aacaaaacaagatacaata 118364
>gb|AC069543.5| Homo sapiens chromosome 10 clone RP11-393H5, complete sequence Length = 179789 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 88985 aacaaaacaagatacaata 88967
>emb|CR536609.3| Mouse DNA sequence from clone RP24-156I23 on chromosome 4, complete sequence Length = 127176 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 116 aggacagtacatattttacatgt 138 ||||||||| ||||||||||||| Sbjct: 60008 aggacagtagatattttacatgt 60030
>gb|AC138596.13| Mus musculus chromosome 1, clone RP24-287G17, complete sequence Length = 151611 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 109626 aacaaaacaagatacaata 109644
>gb|AC154450.3| Mus musculus BAC clone RP24-169J2 from chromosome 12, complete sequence Length = 168477 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 gggaacaaaacaagataca 19 ||||||||||||||||||| Sbjct: 80693 gggaacaaaacaagataca 80675
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 107 caaagcataaggacagtacatat 129 ||||||||| ||||||||||||| Sbjct: 18579255 caaagcatacggacagtacatat 18579233
>dbj|AB007956.2| Homo sapiens mRNA, chromosome 1 specific transcript KIAA0487 Length = 3639 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 2924 gtacatattttacatgtca 2906
>gb|AC093596.3| Homo sapiens BAC clone RP11-98M12 from 4, complete sequence Length = 152347 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 127 tattttacatgtcacatga 145 ||||||||||||||||||| Sbjct: 55713 tattttacatgtcacatga 55731
>gb|AC154854.2| Mus musculus BAC clone RP23-23O4 from chromosome 16, complete sequence Length = 209970 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 6659 aacaaaacaagatacaata 6677
>gb|AC154633.2| Mus musculus BAC clone RP23-296I10 from chromosome 12, complete sequence Length = 216169 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 157013 aacaaaacaagatacaata 156995
>gb|AC151831.3| Mus musculus BAC clone RP24-81D24 from chromosome 14, complete sequence Length = 212749 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 153651 aacaaaacaagatacaata 153669
>gb|AC154119.8| Mus musculus chromosome 1, clone RP24-103A6, complete sequence Length = 159230 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 81897 gtacatattttacatgtca 81915
>gb|AF191654.2|AF191654 Homo sapiens diphosphoinositol polyphosphate phosphohydrolase type 2 (NUDT4) gene, partial sequence Length = 1534 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 804 gtacatattttacatgtca 786
>gb|AF191652.2|AF191652 Homo sapiens diphosphoinositol polyphosphate phosphohydrolase type 2 beta (NUDT4) mRNA, partial cds Length = 4402 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 2716 gtacatattttacatgtca 2698
>gb|AF191651.1|AF191651 Homo sapiens diphosphoinositol polyphosphate phosphohydrolase type 2 alpha (NUDT4) mRNA, partial cds Length = 4396 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 2718 gtacatattttacatgtca 2700
>emb|BX005108.8| Zebrafish DNA sequence from clone CH211-268B13 in linkage group 9, complete sequence Length = 171835 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 112 cataaggacagtacatattttac 134 ||||| ||||||||||||||||| Sbjct: 157733 cataatgacagtacatattttac 157755
>gb|AC093475.9| Mus musculus chromosome 1, clone RP23-54K22, complete sequence Length = 248543 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 170691 aacaaaacaagatacaata 170673
>dbj|AK074343.1| Homo sapiens cDNA FLJ23763 fis, clone HEP18716, highly similar to Homo sapiens diphosphoinositol polyphosphate phosphohydrolase type 2 beta (NUDT4) mRNA Length = 3844 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 122 gtacatattttacatgtca 140 ||||||||||||||||||| Sbjct: 3128 gtacatattttacatgtca 3110
>dbj|AK103175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121H10, full insert sequence Length = 2376 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 107 caaagcataaggacagtacatat 129 ||||||||| ||||||||||||| Sbjct: 2368 caaagcatacggacagtacatat 2346
>gb|AC105986.10| Mus musculus chromosome 15, clone RP24-94B11, complete sequence Length = 170064 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 94141 aacaaaacaagatacaata 94159
>gb|AY897224.1| Avian leukosis virus strain SD0002 envelope precursor protein (env) gene, partial cds Length = 2264 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 160 agacagactatgacaagta 178 ||||||||||||||||||| Sbjct: 1477 agacagactatgacaagta 1459
>dbj|AK059343.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-B07, full insert sequence Length = 597 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 107 caaagcataaggacagtacatat 129 ||||||||| ||||||||||||| Sbjct: 575 caaagcatacggacagtacatat 553
>gb|AC104742.9| Mus musculus chromosome 5, clone RP24-334A12, complete sequence Length = 117378 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 48052 aacaaaacaagatacaata 48070
>emb|BX284615.6| Mouse DNA sequence from clone RP23-20B20 on chromosome 2, complete sequence Length = 98233 Score = 38.2 bits (19), Expect = 9.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 90 acaaatgactacacaatcaaagcataa 116 ||||||||||||||||| |||| |||| Sbjct: 84867 acaaatgactacacaattaaaggataa 84841
>gb|AC102117.13| Mus musculus chromosome 7, clone RP23-154P9, complete sequence Length = 196717 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 126332 aacaaaacaagatacaata 126314
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 107 caaagcataaggacagtacatat 129 ||||||||| ||||||||||||| Sbjct: 18589708 caaagcatacggacagtacatat 18589686
>gb|AC160959.5| Mus musculus BAC clone RP24-230N7 from chromosome 1, complete sequence Length = 153369 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 51678 aacaaaacaagatacaata 51696
>emb|CT025623.13| Mouse DNA sequence from clone RP23-397E11 on chromosome 12, complete sequence Length = 205791 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 63003 aacaaaacaagatacaata 62985
>gb|AC147224.5| Mus musculus BAC clone RP23-101E7 from 15, complete sequence Length = 201924 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 176522 aacaaaacaagatacaata 176540
>gb|AC131687.4| Mus musculus BAC clone RP23-379C1 from 14, complete sequence Length = 176044 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 124524 aacaaaacaagatacaata 124506
>gb|AC154029.4| Mus musculus 6 BAC RP23-26J14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188537 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 acaaaacaagatacaatag 23 ||||||||||||||||||| Sbjct: 94579 acaaaacaagatacaatag 94561
>gb|AC157946.2| Mus musculus BAC clone RP23-281H11 from chromosome 15, complete sequence Length = 190752 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 gaacaaaacaagatacaatagac 25 ||||||||||||| ||||||||| Sbjct: 131955 gaacaaaacaagacacaatagac 131933
>emb|AL954178.8| Mouse DNA sequence from clone RP23-21J10 on chromosome X, complete sequence Length = 103135 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 acaaaacaagatacaatag 23 ||||||||||||||||||| Sbjct: 9950 acaaaacaagatacaatag 9968
>emb|AL845436.7| Mouse DNA sequence from clone RP23-299N13 on chromosome 2, complete sequence Length = 126095 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 128 attttacatgtcacatgat 146 ||||||||||||||||||| Sbjct: 15489 attttacatgtcacatgat 15471
>emb|AL683881.12| Mouse DNA sequence from clone RP23-10M6 on chromosome 2, complete sequence Length = 155168 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 69050 aacaaaacaagatacaata 69032
>emb|AL672307.9| Mouse DNA sequence from clone RP23-141N2 on chromosome 2, complete sequence Length = 206168 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 137771 aacaaaacaagatacaata 137753
>emb|AL807803.6| Mouse DNA sequence from clone RP23-96B14 on chromosome X, complete sequence Length = 177011 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 gaacaaaacaagatacaat 21 ||||||||||||||||||| Sbjct: 131349 gaacaaaacaagatacaat 131331
>emb|AL808015.4| Mouse DNA sequence from clone RP23-467C11 on chromosome X, complete sequence Length = 180935 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 35017 aacaaaacaagatacaata 35035
>gb|AC164522.2| Mus musculus chromosome 1, clone RP23-148N9, complete sequence Length = 183664 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aacaaaacaagatacaata 22 ||||||||||||||||||| Sbjct: 23709 aacaaaacaagatacaata 23691 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,923,349 Number of Sequences: 3902068 Number of extensions: 1923349 Number of successful extensions: 138502 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 138127 Number of HSP's gapped (non-prelim): 375 length of query: 198 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 176 effective length of database: 17,147,199,772 effective search space: 3017907159872 effective search space used: 3017907159872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)