ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl47g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009052.1| Triticum aestivum clone wdr1.pk0002.e12:fis, full... 509 e-141
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 117 3e-23
3gb|AF407010.1| Oryza sativa SET domain-containing protein (SET1)... 117 3e-23
4gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare str... 117 3e-23
5emb|AJ421722.3|OSA421722 Oryza sativa (indica cultivar-group) mR... 117 3e-23
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
7gb|AF443598.1| Zea mays enhancer of zeste-like protein 3 (mez3) ... 101 2e-18
8gb|AF443597.1| Zea mays enhancer of zeste-like protein 2 (mez2) ... 100 6e-18
9gb|AC026029.8| Homo sapiens BAC clone RP11-16G16 from 4, complet... 46 0.082
10emb|AL031734.9|HS652L8 Human DNA sequence from clone RP4-652L8 o... 44 0.32
11emb|AL022151.2|HS199L16 Human DNA sequence from clone RP1-199L16... 44 0.32
12emb|AL022154.2|HS249C1 Human DNA sequence from clone RP1-249C1 o... 44 0.32
13gb|AC128687.10| Homo sapiens 3 BAC RP11-255E6 (Roswell Park Canc... 44 0.32
14gb|AC092937.8| Homo sapiens 3q BAC RP11-114F20 (Roswell Park Can... 44 0.32
15gb|AC021151.8| Homo sapiens BAC clone RP11-483A20 from 4, comple... 44 0.32
16gb|AC110763.4| Homo sapiens BAC clone RP11-57E2 from 4, complete... 44 0.32
17gb|AC112197.3| Homo sapiens chromosome 5 clone RP11-442I12, comp... 44 0.32
18emb|AL121981.17|HS1061C18 Human DNA sequence from clone RP5-1061... 44 0.32
19ref|XM_641627.1| Dictyostelium discoideum hypothetical protein (... 42 1.3
20gb|AC115967.11| Mus musculus chromosome 8, clone RP24-72G22, com... 42 1.3
21emb|AL451105.13| Human DNA sequence from clone RP11-212D3 on chr... 42 1.3
22gb|AC100800.2| Homo sapiens chromosome 8, clone RP11-161I2, comp... 42 1.3
23gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, comp... 42 1.3
24gb|AC108940.3| Homo sapiens BAC clone RP11-728F4 from 2, complet... 42 1.3
25gb|AC119902.12| Mus musculus chromosome 8, clone RP24-235G23, co... 42 1.3
26gb|AY398365.1| Danio rerio clone RK124A3H10 interferon-stimulate... 40 5.1
27ref|NM_205710.1| Danio rerio zgc:92097 (zgc:92097), mRNA 40 5.1
28gb|BC081591.1| Danio rerio cDNA clone MGC:92097 IMAGE:7047409, c... 40 5.1
29gb|AC106834.9| Mus musculus chromosome 19, clone RP24-132H7, com... 40 5.1
30gb|AC131301.9| Mus musculus chromosome 14, clone RP24-70B5, comp... 40 5.1
31gb|AY552542.1|AY552537S6 Oryctolagus cuniculus H+,K+-ATPase alph... 40 5.1
32emb|AL731553.12| Human DNA sequence from clone RP11-56M3 on chro... 40 5.1
33emb|AL162580.20| Human DNA sequence from clone RP11-524A17 on ch... 40 5.1
34emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chr... 40 5.1
35emb|BX901898.15| Zebrafish DNA sequence from clone DKEY-148E3 in... 40 5.1
36gb|AC008679.5| Homo sapiens chromosome 5 clone CTB-53D8, complet... 40 5.1
37emb|BX571950.6| Zebrafish DNA sequence from clone CH211-198P7 in... 40 5.1
38gb|AC090971.3| Homo sapiens chromosome 15 clone RP11-56B16 map 1... 40 5.1
39gb|AC090970.3| Homo sapiens chromosome 15 clone CTD-2650P22 map ... 40 5.1
40gb|AC154263.2| Mus musculus BAC clone RP24-308C1 from chromosome... 40 5.1
41gb|AC010629.8| Homo sapiens chromosome 5 clone CTD-2213L16, comp... 40 5.1
42gb|AC002479.1|AC002479 Human BAC clone GS1-9G13 from 5p15.2, com... 40 5.1
43emb|CR812482.14| Zebrafish DNA sequence from clone CH211-157N19 ... 40 5.1
44gb|AC147972.3| Gallus gallus BAC clone CH261-78M4 from chromosom... 40 5.1 
>gb|BT009052.1| Triticum aestivum clone wdr1.pk0002.e12:fis, full insert mRNA
           sequence
          Length = 1421

 Score =  509 bits (257), Expect = e-141
 Identities = 314/331 (94%), Gaps = 4/331 (1%)
 Strand = Plus / Plus

                                                                       
Query: 51  caggcaagcatgtttacacacaattatgttatcattcagactatcaataaaagcttattt 110
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 caggcaagcatgttcacacacaattatgttatcattcagactatcaataaaagcttattt 170

                                                                       
Query: 111 gtcagtcatccacaagcttggtacttgggattttatttcttaaggaatacacattctttt 170
           |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 171 gtcagtcatccacaaggttggtacttgggactttatttcttaaggaatacacattctttt 230

                                                                       
Query: 171 tatcaggccaacaattggtct-ccttgtataatgaactgggatagaattttgttgaagta 229
           ||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||   |||
Sbjct: 231 tatcaggccaacaatcggtctgccttgtataatgaactgggatagaagtttgtt---gta 287

                                                                       
Query: 230 tgggaatagtttacagcagcctgtatcatcggaactgctcttcaactatcaagcaacttt 289
           ||| |||||||||||||||| | |||||||||| |||||||||| |||||||||||||||
Sbjct: 288 tggcaatagtttacagcagcttctatcatcggagctgctcttcagctatcaagcaacttt 347

                                                                       
Query: 290 gtgtgctcgacgatgagaaccagatgcttcatccttttttgctccttctggtctcctagc 349
           |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 348 gtgtgctcgacgatgagaaccagacgcttcatccttctttgctccttctggtctcctagc 407

                                          
Query: 350 ccaggctggggcttggtcaggtccataccgg 380
           |||||||||||||||||| ||||||||||||
Sbjct: 408 ccaggctggggcttggtccggtccataccgg 438



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                  
Query: 2  tagcataaatttttattgccgccttggtccacctcaacaagtagatgttcaggcaa 57
          ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||
Sbjct: 18 tagcataaatttttattgccatcttggtccacttcaacatgtagatgttcaggcaa 73
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  117 bits (59), Expect = 3e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                            
Query: 274      actatcaagcaactttgtgtgctcgacgatgagaaccagatgcttcatccttttttgctc 333
                |||||| |||||||||||| |||||  | |||||  |||||||||||||||||||||  |
Sbjct: 10924354 actatctagcaactttgtgcgctcggtggtgagagacagatgcttcatccttttttgacc 10924413

                                                           
Query: 334      cttctggtctcctagcccaggctggggcttggtcaggtccata 376
                |||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 10924414 cttccggtctcctagcccaagctggggcttggtcaggtccata 10924456
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>gb|AF407010.1| Oryza sativa SET domain-containing protein (SET1) mRNA, complete cds
          Length = 2957

 Score =  117 bits (59), Expect = 3e-23
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                        
Query: 274  actatcaagcaactttgtgtgctcgacgatgagaaccagatgcttcatccttttttgctc 333
            |||||| |||||||||||| |||||  | |||||  |||||||||||||||||||||  |
Sbjct: 2707 actatctagcaactttgtgcgctcggtggtgagagacagatgcttcatccttttttgacc 2648

                                                       
Query: 334  cttctggtctcctagcccaggctggggcttggtcaggtccata 376
            |||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 2647 cttccggtctcctagcccaagctggggcttggtcaggtccata 2605
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>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05,
             from chromosome 3, complete sequence
          Length = 127348

 Score =  117 bits (59), Expect = 3e-23
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                         
Query: 274   actatcaagcaactttgtgtgctcgacgatgagaaccagatgcttcatccttttttgctc 333
             |||||| |||||||||||| |||||  | |||||  |||||||||||||||||||||  |
Sbjct: 56675 actatctagcaactttgtgcgctcggtggtgagagacagatgcttcatccttttttgacc 56616

                                                        
Query: 334   cttctggtctcctagcccaggctggggcttggtcaggtccata 376
             |||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 56615 cttccggtctcctagcccaagctggggcttggtcaggtccata 56573
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>emb|AJ421722.3|OSA421722 Oryza sativa (indica cultivar-group) mRNA for enhancer of zeste
            protein (ez1 gene)
          Length = 3133

 Score =  117 bits (59), Expect = 3e-23
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                        
Query: 274  actatcaagcaactttgtgtgctcgacgatgagaaccagatgcttcatccttttttgctc 333
            |||||| |||||||||||| |||||  | |||||  |||||||||||||||||||||  |
Sbjct: 2904 actatctagcaactttgtgcgctcggtggtgagagacagatgcttcatccttttttgacc 2845

                                                       
Query: 334  cttctggtctcctagcccaggctggggcttggtcaggtccata 376
            |||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 2844 cttccggtctcctagcccaagctggggcttggtcaggtccata 2802
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  117 bits (59), Expect = 3e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                            
Query: 274      actatcaagcaactttgtgtgctcgacgatgagaaccagatgcttcatccttttttgctc 333
                |||||| |||||||||||| |||||  | |||||  |||||||||||||||||||||  |
Sbjct: 10922455 actatctagcaactttgtgcgctcggtggtgagagacagatgcttcatccttttttgacc 10922514

                                                           
Query: 334      cttctggtctcctagcccaggctggggcttggtcaggtccata 376
                |||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 10922515 cttccggtctcctagcccaagctggggcttggtcaggtccata 10922557
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>gb|AF443598.1| Zea mays enhancer of zeste-like protein 3 (mez3) mRNA, complete cds
          Length = 3149

 Score =  101 bits (51), Expect = 2e-18
 Identities = 109/127 (85%), Gaps = 1/127 (0%)
 Strand = Plus / Minus

                                                                        
Query: 251  tgtatcatc-ggaactgctcttcaactatcaagcaactttgtgtgctcgacgatgagaac 309
            ||||||||| ||| |||||||||| ||||| ||||||||||||||||||| | |||||  
Sbjct: 2769 tgtatcatccggagctgctcttcagctatcgagcaactttgtgtgctcgatggtgagaga 2710

                                                                        
Query: 310  cagatgcttcatccttttttgctccttctggtctcctagcccaggctggggcttggtcag 369
            | |||||||| ||||| ||||  ||||| |||||||||||||| ||||| || |||||||
Sbjct: 2709 cggatgcttcgtccttctttgacccttcgggtctcctagcccaagctggagcctggtcag 2650

                   
Query: 370  gtccata 376
            | |||||
Sbjct: 2649 gcccata 2643
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>gb|AF443597.1| Zea mays enhancer of zeste-like protein 2 (mez2) mRNA, complete cds
          Length = 3047

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                        
Query: 267  ctcttcaactatcaagcaactttgtgtgctcgacgatgagaaccagatgcttcatccttt 326
            ||||||| ||||| ||| ||||||||||||||||| |||||  | ||||| || ||||| 
Sbjct: 2722 ctcttcagctatcgagccactttgtgtgctcgacggtgagagacggatgcctcgtccttc 2663

                                                              
Query: 327  tttgctccttctggtctcctagcccaggctggggcttggtcaggtccata 376
            |||| |||||| |||||||||||||| ||||| || ||||||||||||||
Sbjct: 2662 tttgatccttcgggtctcctagcccaagctggagcctggtcaggtccata 2613
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>gb|AC026029.8| Homo sapiens BAC clone RP11-16G16 from 4, complete sequence
          Length = 173067

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 154   ggaatacacattctttttatcag 176
             |||||||||||||||||||||||
Sbjct: 90497 ggaatacacattctttttatcag 90475
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>emb|AL031734.9|HS652L8 Human DNA sequence from clone RP4-652L8 on chromosome 1q24.1-25.2
              Contains a novel gene, the 5' end of the PLAC3 gene for
              placenta-specific 3 (PLAC3) and a protein tyrosine
              phosphatase type IVA (member 1) (PTP4A1) pseudogene,
              complete sequence
          Length = 168835

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 155    gaatacacattctttttatcag 176
              ||||||||||||||||||||||
Sbjct: 130455 gaatacacattctttttatcag 130434
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>emb|AL022151.2|HS199L16 Human DNA sequence from clone RP1-199L16 on chromosome Xq22.1-22.3
            Contains a ribosomal protein S29 (RPS29) pseudogene,
            complete sequence
          Length = 134963

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 155  gaatacacattctttttatcag 176
            ||||||||||||||||||||||
Sbjct: 5143 gaatacacattctttttatcag 5164
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>emb|AL022154.2|HS249C1 Human DNA sequence from clone RP1-249C1 on chromosome Xq21.1-22.2,
             complete sequence
          Length = 118153

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   gaatacacattctttttatcag 176
             ||||||||||||||||||||||
Sbjct: 77628 gaatacacattctttttatcag 77649
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>gb|AC128687.10| Homo sapiens 3 BAC RP11-255E6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 92345

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   gaatacacattctttttatcag 176
             ||||||||||||||||||||||
Sbjct: 34018 gaatacacattctttttatcag 34039
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>gb|AC092937.8| Homo sapiens 3q BAC RP11-114F20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188709

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 155    gaatacacattctttttatcag 176
              ||||||||||||||||||||||
Sbjct: 114298 gaatacacattctttttatcag 114319
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>gb|AC021151.8| Homo sapiens BAC clone RP11-483A20 from 4, complete sequence
          Length = 175081

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 155  gaatacacattctttttatcag 176
            ||||||||||||||||||||||
Sbjct: 2864 gaatacacattctttttatcag 2885
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>gb|AC110763.4| Homo sapiens BAC clone RP11-57E2 from 4, complete sequence
          Length = 84182

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   gaatacacattctttttatcag 176
             ||||||||||||||||||||||
Sbjct: 11489 gaatacacattctttttatcag 11510
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>gb|AC112197.3| Homo sapiens chromosome 5 clone RP11-442I12, complete sequence
          Length = 175775

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 155   gaatacacattctttttatcag 176
             ||||||||||||||||||||||
Sbjct: 55249 gaatacacattctttttatcag 55228
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>emb|AL121981.17|HS1061C18 Human DNA sequence from clone RP5-1061C18 on chromosome 3p36.22-36.33
              Contains the 5' part of the DLG1 gene encoding the discs
              protein (large Drosophila homolog 1, presynaptic protein
              SAP97) and a CpG island, complete sequence
          Length = 148493

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 155    gaatacacattctttttatcag 176
              ||||||||||||||||||||||
Sbjct: 135347 gaatacacattctttttatcag 135326
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>ref|XM_641627.1| Dictyostelium discoideum hypothetical protein (DDB0190980), partial
           mRNA
          Length = 1269

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 307 aaccagatgcttcatccttttttgc 331
           |||||||||||||||||||| ||||
Sbjct: 457 aaccagatgcttcatcctttcttgc 433
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>gb|AC115967.11| Mus musculus chromosome 8, clone RP24-72G22, complete sequence
          Length = 221435

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 63   tttacacacaattatgttatc 83
            |||||||||||||||||||||
Sbjct: 9627 tttacacacaattatgttatc 9647
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>emb|AL451105.13| Human DNA sequence from clone RP11-212D3 on chromosome X Contains a
             SAR1a gene homolog 1 (S. cerevisiae) (SARA1) pseudogene,
             two novel genes and a chromosome 14 open reading frame 116
             (C14orf116) pseudogene, complete sequence
          Length = 125288

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 156   aatacacattctttttatcag 176
             |||||||||||||||||||||
Sbjct: 11702 aatacacattctttttatcag 11682
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>gb|AC100800.2| Homo sapiens chromosome 8, clone RP11-161I2, complete sequence
          Length = 196849

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 155    gaatacacattctttttatca 175
              |||||||||||||||||||||
Sbjct: 166076 gaatacacattctttttatca 166096
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>gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, complete sequence
          Length = 216706

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 155    gaatacacattctttttatca 175
              |||||||||||||||||||||
Sbjct: 105204 gaatacacattctttttatca 105224
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>gb|AC108940.3| Homo sapiens BAC clone RP11-728F4 from 2, complete sequence
          Length = 126219

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 155   gaatacacattctttttatca 175
             |||||||||||||||||||||
Sbjct: 44545 gaatacacattctttttatca 44565
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>gb|AC119902.12| Mus musculus chromosome 8, clone RP24-235G23, complete sequence
          Length = 146712

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 63     tttacacacaattatgttatc 83
              |||||||||||||||||||||
Sbjct: 103164 tttacacacaattatgttatc 103184
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>gb|AY398365.1| Danio rerio clone RK124A3H10 interferon-stimulated transcription
            factor 3, gamma 48kDa (ISGF3G) mRNA, complete cds
          Length = 1772

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 214  gaattttgttgaagtatgggaata 237
            ||||||||||||||||| ||||||
Sbjct: 1356 gaattttgttgaagtatcggaata 1379
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>ref|NM_205710.1| Danio rerio zgc:92097 (zgc:92097), mRNA
          Length = 1772

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 214  gaattttgttgaagtatgggaata 237
            ||||||||||||||||| ||||||
Sbjct: 1356 gaattttgttgaagtatcggaata 1379
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>gb|BC081591.1| Danio rerio cDNA clone MGC:92097 IMAGE:7047409, complete cds
          Length = 1753

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 214  gaattttgttgaagtatgggaata 237
            ||||||||||||||||| ||||||
Sbjct: 1322 gaattttgttgaagtatcggaata 1345
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>gb|AC106834.9| Mus musculus chromosome 19, clone RP24-132H7, complete sequence
          Length = 177277

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   atcaagcaactttgtgtgct 296
             ||||||||||||||||||||
Sbjct: 62269 atcaagcaactttgtgtgct 62250
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>gb|AC131301.9| Mus musculus chromosome 14, clone RP24-70B5, complete sequence
          Length = 236224

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     caataaaagcttatttgtca 114
              ||||||||||||||||||||
Sbjct: 201658 caataaaagcttatttgtca 201639
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>gb|AY552542.1|AY552537S6 Oryctolagus cuniculus H+,K+-ATPase alpha 2 subunit gene, exons 22, 23
            and complete cds
          Length = 2257

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 323  cttttttgctccttctggtc 342
            ||||||||||||||||||||
Sbjct: 1919 cttttttgctccttctggtc 1938
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>emb|AL731553.12| Human DNA sequence from clone RP11-56M3 on chromosome 10 Contains a
             nudix (nucleoside diphosphate linked moiety X)-type
             pseudogene, complete sequence
          Length = 99089

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    cattcagactatcaataaaa 102
             ||||||||||||||||||||
Sbjct: 79424 cattcagactatcaataaaa 79405
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>emb|AL162580.20| Human DNA sequence from clone RP11-524A17 on chromosome 6 Contains a
             novel gene and a protein phosphatase 1 regulatory
             (inhibitor) subunit 14A (PPP1R14A) pseudogene, complete
             sequence
          Length = 171483

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 164   ttctttttatcaggccaacaattg 187
             |||||||||| |||||||||||||
Sbjct: 62357 ttctttttatgaggccaacaattg 62380
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>emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chromosome 13q21.33-22.3
             Contains a signal sequence receptor, alpha
             (translocon-associated protein alpha) (SSR1) pseudogene,
             complete sequence
          Length = 151603

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   aggaatacacattcttttta 172
             ||||||||||||||||||||
Sbjct: 15181 aggaatacacattcttttta 15200
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>emb|BX901898.15| Zebrafish DNA sequence from clone DKEY-148E3 in linkage group 1, complete
              sequence
          Length = 249378

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 77     tgttatcattcagactatcaataa 100
              ||||| ||||||||||||||||||
Sbjct: 229366 tgttaacattcagactatcaataa 229343
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>gb|AC008679.5| Homo sapiens chromosome 5 clone CTB-53D8, complete sequence
          Length = 232613

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    atccttttttgctccttctg 339
              ||||||||||||||||||||
Sbjct: 148544 atccttttttgctccttctg 148525
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>emb|BX571950.6| Zebrafish DNA sequence from clone CH211-198P7 in linkage group 12,
              complete sequence
          Length = 196442

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 214    gaattttgttgaagtatgggaata 237
              ||||||||||||||||| ||||||
Sbjct: 137532 gaattttgttgaagtatcggaata 137509
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>gb|AC090971.3| Homo sapiens chromosome 15 clone RP11-56B16 map 15q21.3, complete
             sequence
          Length = 192464

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 267   ctcttcaactatcaagcaactttg 290
             ||||||||| ||||||||||||||
Sbjct: 78766 ctcttcaacaatcaagcaactttg 78789
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>gb|AC090970.3| Homo sapiens chromosome 15 clone CTD-2650P22 map 15q21, complete
            sequence
          Length = 187399

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 267  ctcttcaactatcaagcaactttg 290
            ||||||||| ||||||||||||||
Sbjct: 2552 ctcttcaacaatcaagcaactttg 2575
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>gb|AC154263.2| Mus musculus BAC clone RP24-308C1 from chromosome 14, complete sequence
          Length = 196901

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     caataaaagcttatttgtca 114
              ||||||||||||||||||||
Sbjct: 182385 caataaaagcttatttgtca 182404
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>gb|AC010629.8| Homo sapiens chromosome 5 clone CTD-2213L16, complete sequence
          Length = 82882

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 153   aggaatacacattctttttatcag 176
             ||||||||||||||||||| ||||
Sbjct: 45487 aggaatacacattctttttctcag 45510
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>gb|AC002479.1|AC002479 Human BAC clone GS1-9G13 from 5p15.2, complete sequence
          Length = 88682

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 153  aggaatacacattctttttatcag 176
            ||||||||||||||||||| ||||
Sbjct: 9897 aggaatacacattctttttctcag 9920
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>emb|CR812482.14| Zebrafish DNA sequence from clone CH211-157N19 in linkage group 1,
             complete sequence
          Length = 179573

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 77    tgttatcattcagactatcaataa 100
             ||||| ||||||||||||||||||
Sbjct: 67119 tgttaacattcagactatcaataa 67142
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>gb|AC147972.3| Gallus gallus BAC clone CH261-78M4 from chromosome unknown, complete
             sequence
          Length = 197959

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 76    atgttatcattcagactatcaataaaag 103
             |||||||||| || ||||||||||||||
Sbjct: 30810 atgttatcatccatactatcaataaaag 30783


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,038,083
Number of Sequences: 3902068
Number of extensions: 5038083
Number of successful extensions: 86689
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86561
Number of HSP's gapped (non-prelim): 126
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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