>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                         
Query: 12      gcttctctttcttgtcagcacttgttttgctggattttacactgataacgccgcttgc 69
               ||||||||| |||||||||  |||| ||| ||||||| ||||||||||| ||||||||
Sbjct: 3596123 gcttctcttgcttgtcagcctttgtcttgttggatttcacactgataacaccgcttgc 3596066

>dbj|AK058272.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B09, full
            insert sequence
          Length = 1839

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 12   gcttctctttcttgtcagcacttgttttgctggattttacactgataacgccgcttgc 69
            ||||||||| |||||||||  |||| ||| ||||||| ||||||||||| ||||||||
Sbjct: 1447 gcttctcttgcttgtcagcctttgtcttgttggatttcacactgataacaccgcttgc 1390

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                         
Query: 12      gcttctctttcttgtcagcacttgttttgctggattttacactgataacgccgcttgc 69
               ||||||||| |||||||||  |||| ||| ||||||| ||||||||||| ||||||||
Sbjct: 3596068 gcttctcttgcttgtcagcctttgtcttgttggatttcacactgataacaccgcttgc 3596011

>emb|AL731761.3|CNS07YPV Oryza sativa chromosome 12, . BAC OJ1119_B11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 122128

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                       
Query: 12    gcttctctttcttgtcagcacttgttttgctggattttacactgataacgccgcttgc 69
             ||||||||| |||||||||  |||| ||| ||||||| ||||||||||| ||||||||
Sbjct: 93305 gcttctcttgcttgtcagcctttgtcttgttggatttcacactgataacaccgcttgc 93362

>gb|AE000658.1|HUAE000658 Homo sapiens T-cell receptor alpha delta locus from bases 1 to 250529
              (section 1 of 5) of the Complete Nucleotide Sequence
          Length = 250529

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      ctttccctgtgcttctctttc 22
              |||||||||||||||||||||
Sbjct: 183067 ctttccctgtgcttctctttc 183087

>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome
              14
          Length = 1071646

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      ctttccctgtgcttctctttc 22
              |||||||||||||||||||||
Sbjct: 183067 ctttccctgtgcttctctttc 183087

>gb|AC153801.1| Mus musculus 10 NOVECTOR RP24-255E19 (Roswell Park Cancer Institute
              (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 156755

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      ttccctgtgcttctctttct 23
              ||||||||||||||||||||
Sbjct: 120844 ttccctgtgcttctctttct 120825

>gb|AC110214.7| Mus musculus chromosome 8, clone RP24-485L5, complete sequence
          Length = 213387

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 33    ttgttttgctggattttacactga 56
             ||||||||||| ||||||||||||
Sbjct: 64847 ttgttttgctgtattttacactga 64870

>emb|AL603824.4| Human DNA sequence from clone RP11-235G8 on chromosome 10 Contains part
             of the gene for cyclin fold protein 1 (CFP1) (CBCP1),
             complete sequence
          Length = 89871

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    tgtcagcacttgttttgctg 43
             ||||||||||||||||||||
Sbjct: 32293 tgtcagcacttgttttgctg 32274

>gb|AC161188.5| Mus musculus chromosome 8, clone RP23-227D17, complete sequence
          Length = 143672

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 33     ttgttttgctggattttacactga 56
              ||||||||||| ||||||||||||
Sbjct: 102829 ttgttttgctgtattttacactga 102852

>gb|AC090912.6| Homo sapiens chromosome 18, clone RP11-370A5, complete sequence
          Length = 187374

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 32    cttgttttgctggattttacactgataa 59
             ||||||||| ||||| ||||||||||||
Sbjct: 36968 cttgttttgatggatgttacactgataa 36941

>gb|AC090914.9| Homo sapiens chromosome 18, clone RP11-739L10, complete sequence
          Length = 144425

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 32    cttgttttgctggattttacactgataa 59
             ||||||||| ||||| ||||||||||||
Sbjct: 33363 cttgttttgatggatgttacactgataa 33390

>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete
               genome
          Length = 2516575

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 65      cttgcagacaatttctcatt 84
               ||||||||||||||||||||
Sbjct: 2250106 cttgcagacaatttctcatt 2250125

>gb|AC019233.7|AC019233 Homo sapiens clone RP11-631O4, complete sequence
          Length = 263876

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     ttccctgtgcttctctttct 23
             ||||||||||||||||||||
Sbjct: 34607 ttccctgtgcttctctttct 34588

>ref|XM_659342.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6830.2), mRNA
          Length = 1368

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 42   tggattttacactgataac 60
            |||||||||||||||||||
Sbjct: 1278 tggattttacactgataac 1296

>gb|AC006009.2| Homo sapiens PAC clone RP5-850I1 from 7, complete sequence
          Length = 93942

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 71    gacaatttctcattctgca 89
             |||||||||||||||||||
Sbjct: 63940 gacaatttctcattctgca 63958

>gb|AC108420.8| Mus musculus chromosome 7, clone RP23-38E14, complete sequence
          Length = 134825

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     ccctgtgcttctctttctt 24
             |||||||||||||||||||
Sbjct: 39433 ccctgtgcttctctttctt 39415

>emb|BX284698.6| Human DNA sequence from clone RP11-41M24 on chromosome 1, complete
             sequence
          Length = 84876

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     tccctgtgcttctctttct 23
             |||||||||||||||||||
Sbjct: 10475 tccctgtgcttctctttct 10493

>emb|AL583860.7| Human DNA sequence from clone RP11-16P8 on chromosome 10 Contains the
             5' end of a novel gene, complete sequence
          Length = 87845

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     ccctgtgcttctctttctt 24
             |||||||||||||||||||
Sbjct: 34324 ccctgtgcttctctttctt 34306

>emb|AL365222.24| Human DNA sequence from clone RP11-274E6 on chromosome 6, complete
             sequence
          Length = 166244

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 36    ttttgctggattttacact 54
             |||||||||||||||||||
Sbjct: 94736 ttttgctggattttacact 94718

>emb|AL359715.12| Human DNA sequence from clone RP11-250B2 on chromosome 6 Contains a 60S
              ribosomal protein L17 (RPL17) pseudogene, a novel gene and
              a laminin receptor 1 (LAMR1) pseudogene, complete sequence
          Length = 122379

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 31     acttgttttgctggatttt 49
              |||||||||||||||||||
Sbjct: 114237 acttgttttgctggatttt 114255

>emb|AL354921.12| Human DNA sequence from clone RP5-840O13 on chromosome 11p12-13,
             complete sequence
          Length = 106657

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 31    acttgttttgctggatttt 49
             |||||||||||||||||||
Sbjct: 65771 acttgttttgctggatttt 65753

>emb|AL662879.5|HS279F22 Homo sapiens chromosome 9 BAC RP11-279F22, complete sequence
          Length = 159300

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      tttccctgtgcttctcttt 21
              |||||||||||||||||||
Sbjct: 101982 tttccctgtgcttctcttt 101964

>gb|AC161370.3| Mus musculus BAC clone RP23-437J23 from chromosome 9, complete sequence
          Length = 187354

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     ccctgtgcttctctttctt 24
             |||||||||||||||||||
Sbjct: 99193 ccctgtgcttctctttctt 99211

>emb|AL929518.16| Zebrafish DNA sequence from clone CH211-163F10 in linkage group 2,
              complete sequence
          Length = 162473

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 2      ctttccctgtgcttctctttctt 24
              |||||||| ||||||||||||||
Sbjct: 102416 ctttccctctgcttctctttctt 102438

>gb|AC007218.6| Homo sapiens chromosome 16 clone RP11-297M9, complete sequence
          Length = 193220

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     cctgtgcttctctttcttg 25
             |||||||||||||||||||
Sbjct: 54079 cctgtgcttctctttcttg 54097

>dbj|BS000212.1| Pan troglodytes chromosome 22 clone:RP43-022K21, map 22, complete
             sequences
          Length = 146902

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    ttgttttgctggattttac 51
             |||||||||||||||||||
Sbjct: 89628 ttgttttgctggattttac 89646

>dbj|AP001697.1| Homo sapiens genomic DNA, chromosome 21q, section 41/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 33     ttgttttgctggattttac 51
              |||||||||||||||||||
Sbjct: 286386 ttgttttgctggattttac 286404

>gb|AC113982.8| Mus musculus chromosome 1, clone RP24-78E16, complete sequence
          Length = 206640

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 18     ctttcttgtcagcacttgt 36
              |||||||||||||||||||
Sbjct: 158366 ctttcttgtcagcacttgt 158348

>emb|AL671229.11| Mouse DNA sequence from clone RP23-93N10 on chromosome 4, complete
             sequence
          Length = 237082

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    gctggattttacactgata 58
             |||||||||||||||||||
Sbjct: 92761 gctggattttacactgata 92743

>dbj|AP001600.1| Homo sapiens genomic DNA, chromosome 21, clone:KB45E1, APP-D21S292
             region, complete sequence
          Length = 91097

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    ttgttttgctggattttac 51
             |||||||||||||||||||
Sbjct: 45333 ttgttttgctggattttac 45351

>dbj|AP001599.1| Homo sapiens genomic DNA, chromosome 21, clone:KB126A3, APP-D21S292
             region, complete sequence
          Length = 118241

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    ttgttttgctggattttac 51
             |||||||||||||||||||
Sbjct: 98674 ttgttttgctggattttac 98692


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,235,678
Number of Sequences: 3902068
Number of extensions: 1235678
Number of successful extensions: 91124
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91018
Number of HSP's gapped (non-prelim): 106
length of query: 102
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 81
effective length of database: 17,151,101,840
effective search space: 1389239249040
effective search space used: 1389239249040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)