ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl47g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FUCO2_RAT (Q6AYS4) Plasma alpha-L-fucosidase precursor (EC 3.2.1... 28 8.5

>FUCO2_RAT (Q6AYS4) Plasma alpha-L-fucosidase precursor (EC 3.2.1.51)|
           (Alpha-L-fucosidase 2) (Alpha-L-fucoside fucohydrolase
           2)
          Length = 459

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +3

Query: 120 VTGDQTHFTRDCKHGGYYP-SGVQHPGH 200
           VT D+      CKHGGYY  S   +PGH
Sbjct: 250 VTNDRWGAGSICKHGGYYTCSDRYNPGH 277


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.123    0.338 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,976,708
Number of Sequences: 219361
Number of extensions: 403999
Number of successful extensions: 796
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 80,573,946
effective HSP length: 46
effective length of database: 70,483,340
effective search space used: 1691600160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
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