>POLG_BVDVC (Q96662) Genome polyprotein [Contains: N-terminal protease (EC|
           3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C;
           E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1
           (gp33); Envelope glycoprotein E2 (gp55); p7;
           Nonstructural protein 2
          Length = 3907

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 97  NIASVCLEGNCRVCNSFSPLCGYYTMPG 14
           N+AS+   G+CR  NS  P+ G Y  PG
Sbjct: 59  NLASLPKRGDCRSGNSKGPVSGIYLKPG 86

>POLG_BVDVN (P19711) Genome polyprotein [Contains: N-terminal protease (EC|
           3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C;
           E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1
           (gp33); Envelope glycoprotein E2 (gp55); p7;
           Nonstructural protein 2
          Length = 3988

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 97  NIASVCLEGNCRVCNSFSPLCGYYTMPG 14
           N+AS+   G+CR  NS  P+ G Y  PG
Sbjct: 59  NLASLPKRGDCRSGNSRGPVSGIYLKPG 86

>LPXD_HAEIN (P43888) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 341

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 115 VLAGSLNIASVCLEGNCRVCNSFSPLCGYYTMPG 14
           ++AGSL +   CL G   V N    +C   T+ G
Sbjct: 257 IMAGSLTVGRYCLIGGASVINGHMEICDKVTITG 290

>LPXD_PASMU (Q9CJL0) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 342

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 115 VLAGSLNIASVCLEGNCRVCNSFSPLCGYYTMPG 14
           ++AGSL +   CL G   V N    +C   T+ G
Sbjct: 256 IMAGSLTVGRYCLIGGASVINGHMEICDKVTITG 289

>POLG_BVDVS (Q01499) Genome polyprotein [Contains: N-terminal protease (EC|
           3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C;
           E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1
           (gp33); Envelope glycoprotein E2 (gp55); p7;
           Nonstructural protein 2
          Length = 3898

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 97  NIASVCLEGNCRVCNSFSPLCGYYTMPG 14
           ++AS+   G+CR  NS  P+ G Y  PG
Sbjct: 59  SLASLPKRGDCRSGNSKGPVSGIYLKPG 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,837,792
Number of Sequences: 219361
Number of extensions: 620699
Number of successful extensions: 1326
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 80,573,946
effective HSP length: 58
effective length of database: 67,851,008
effective search space used: 1628424192
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)