Clone Name | rbastl47f07 |
---|---|
Clone Library Name | barley_pub |
>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)| Length = 515 Score = 30.8 bits (68), Expect = 0.84 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +2 Query: 143 TPTKPNPSLSTKLTAPEIACE-HNHHHNTVLLYKIAI*ISNLSPQSRCP 286 +PT P+PS + +P A H+HHH++ Y ++ S SP S P Sbjct: 98 SPTSPHPSNQPAMLSPSTAASQHHHHHSSSSSYAVSP-TSPTSPTSSGP 145
>TSC10_YEAST (P38342) 3-ketodihydrosphingosine reductase TSC10 (EC 1.1.1.102)| (3-dehydrosphinganine reductase) (KDS reductase) (Temperature-sensitive CSG2 suppressor protein 10) Length = 320 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = -2 Query: 236 TAKLCCGGGCVHKLFQALS 180 T LCC GG V KLF+ LS Sbjct: 111 TQTLCCAGGAVPKLFRGLS 129
>BSH_CHICK (Q6RFL5) Brain-specific homeobox protein homolog| Length = 233 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/55 (27%), Positives = 24/55 (43%) Frame = +2 Query: 107 SVQVRIPYVMYTTPTKPNPSLSTKLTAPEIACEHNHHHNTVLLYKIAI*ISNLSP 271 S+ R+P + Y P P P+L P + +HHH+ L + + L P Sbjct: 44 SLASRVPLLDYGYPLMPAPALLAPHPHPALHKPEHHHHHPYFLTTSGVPVPALFP 98
>TXH3_ORNHU (P61103) Huwentoxin-3 precursor (Huwentoxin-III) (HwTx-III)| [Contains: Mutant of huwentoxin-3 (Mutant of huwentoxin-III) (mHWTX-III) (HWTX-IIIa)] Length = 87 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 347 QSPKEKKRKEMQACLLAVRARDSGSEVTDC*FIWQFCTAKLCCGG 213 +S +++ KEM + + AV D E DC + C KLCC G Sbjct: 26 ESEEKEFPKEMLSSIFAVD-NDFKQEERDCAGYMRECKEKLCCSG 69
>MRAY_ENTHR (O07668) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 321 Score = 27.7 bits (60), Expect = 7.1 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 7/60 (11%) Frame = -1 Query: 249 MAILYSKTVLWWWLCSQAISGAVSLVDK-DGF--GLVGVVYITYGILTW----TDILFAC 91 + + Y ++W + S AV+L D DG GL + + TYGI+ W D+L C Sbjct: 150 LGLFYGVFAIFWLV---GFSNAVNLTDGIDGLVAGLGTISFATYGIIAWHQQQYDVLVIC 206
>SCAR2_ARATH (Q5XPJ9) Protein SCAR2 (AtSCAR2) (Protein WAVE4) (Protein| DISTORTED3) (Protein IRREGULAR TRICHOME BRANCH1) Length = 1399 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = -2 Query: 95 LVKLGDFPNCVYDSSEEC 42 +V GD P CV DS EEC Sbjct: 120 VVTSGDLPRCVMDSYEEC 137
>AREA_ASPNG (O13412) Nitrogen regulatory protein areA| Length = 882 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +2 Query: 113 QVRIPYVMYTTPTKPNPSLSTKLTAPEIACE 205 Q+ P ++ + PT+ NPSLST LT+ + E Sbjct: 166 QLTSPPLIASRPTRQNPSLSTDLTSDPMNLE 196
>HEM1_HALSA (Q9HP72) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)| Length = 436 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +1 Query: 178 TDSA*NSL*TQPPPQHSFAVQNCH-INQQSVTSEPLS 285 T++A ++L QPP + +F +Q CH + VT++ S Sbjct: 31 TEAALDALLEQPPVEEAFVLQTCHRVEAYVVTADQAS 67
>ANK1_MOUSE (Q02357) Ankyrin-1 (Erythrocyte ankyrin)| Length = 1862 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/58 (29%), Positives = 22/58 (37%) Frame = +2 Query: 119 RIPYVMYTTPTKPNPSLSTKLTAPEIACEHNHHHNTVLLYKIAI*ISNLSPQSRCPWH 292 R+ V+ KPN T IAC+ NH LL K I ++ P H Sbjct: 348 RVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLH 405
>NU4M_APILI (P34853) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 447 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = -1 Query: 234 SKTVLWWWLCSQAISGAVSLVDKDGFGLVGVVYITYGILTW 112 S ++LW+ LCS + VSL L+ V + G+++W Sbjct: 348 SMSLLWFMLCSSNMGSPVSL------NLISEVMLLIGMISW 382
>ANK1_HUMAN (P16157) Ankyrin-1 (Erythrocyte ankyrin) (Ankyrin-R)| Length = 1880 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/58 (29%), Positives = 22/58 (37%) Frame = +2 Query: 119 RIPYVMYTTPTKPNPSLSTKLTAPEIACEHNHHHNTVLLYKIAI*ISNLSPQSRCPWH 292 R+ V+ KPN T IAC+ NH LL K I ++ P H Sbjct: 351 RVAKVLLDKGAKPNSRALNGFTPLHIACKKNHVRVMELLLKTGASIDAVTESGLTPLH 408 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,629,306 Number of Sequences: 219361 Number of extensions: 952653 Number of successful extensions: 2380 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2325 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2375 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)