ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl47f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
2dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
4dbj|AP005552.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
5dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
6emb|AL111675.1|CNS019IB Botrytis cinerea strain T4 cDNA library 44 0.36
7gb|AC006036.3| Homo sapiens BAC clone RP11-215P16 from 7, comple... 42 1.4
8ref|XM_475025.1| Oryza sativa (japonica cultivar-group), predic... 40 5.7
9ref|XM_471288.1| Oryza sativa (japonica cultivar-group), predic... 40 5.7
10gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
11gb|BC077893.1| Xenopus laevis MGC80709 protein, mRNA (cDNA clone... 40 5.7
12gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
13emb|CR954964.4| Mouse DNA sequence from clone RP24-201A22 on chr... 40 5.7
14ref|XM_733144.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 5.7
15ref|XM_738904.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 5.7
16emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4,... 40 5.7
17emb|AL731636.3|OSJN00281 Oryza sativa genomic DNA, chromosome 4,... 40 5.7
18emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4,... 40 5.7
19emb|BX510641.9| Zebrafish DNA sequence from clone CH211-106M9 in... 40 5.7
20ref|XM_704208.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 5.7
21ref|XM_704206.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 5.7
22ref|XM_704205.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 5.7
23ref|XM_704204.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 5.7
24ref|XM_704203.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 5.7
25ref|XM_704202.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 5.7
26ref|XM_704191.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 5.7
27ref|XM_684306.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 5.7
28emb|CR406732.1| Gallus gallus finished cDNA, clone ChEST989n3 40 5.7
29emb|BX927321.6| Mouse DNA sequence from clone RP23-144M4 on chro... 40 5.7
30emb|BX571823.6| Zebrafish DNA sequence from clone CH211-146L10 i... 40 5.7
31emb|BX936287.9| Mouse DNA sequence from clone RP23-221M16 on chr... 40 5.7
32emb|BX936348.7| Mouse DNA sequence from clone RP23-348D19 on chr... 40 5.7
33emb|BX936354.6| Mouse DNA sequence from clone RP23-354D7 on chro... 40 5.7
34dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
35dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
36dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
37dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
38dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
40emb|AL662940.3|OSJN00142 Oryza sativa genomic DNA, chromosome 4,... 40 5.7
41gb|AC010663.6| Drosophila melanogaster 3L BAC RP98-17M18 (Roswel... 40 5.7
42gb|AC117276.7| Drosophila melanogaster 3 BAC RP98-29A7 (Roswell ... 40 5.7
43dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
44dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
45emb|BX247886.7| Zebrafish DNA sequence from clone DKEY-253J12 in... 40 5.7
46dbj|AP005741.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
47dbj|AP005477.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
48dbj|AP004811.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
49dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
50emb|BX664729.3| Mouse DNA sequence from clone RP24-251C18 on chr... 40 5.7
51dbj|AP005861.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
52dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
53dbj|AP005618.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
54dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
55dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
56emb|AL672179.9| Mouse DNA sequence from clone RP23-468C6 on chro... 40 5.7
57dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
58dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
59gb|AC005510.3|AC005510 Homo sapiens chromosome 4 clone B368A9 ma... 40 5.7
60gb|AE002786.2| Drosophila melanogaster chromosome 3L, section 81... 40 5.7
61dbj|AP002008.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.7
62gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
63gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
64emb|AL662971.2|OSJN00172 Oryza sativa genomic DNA, chromosome 4,... 40 5.7
65emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb... 40 5.7
66emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116... 40 5.7
67emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.7
68emb|CR354601.14| Mouse DNA sequence from clone RP23-395J7 on chr... 40 5.7
69emb|CR954967.11| Mouse DNA sequence from clone RP24-329J6 on chr... 40 5.7
70emb|CR954961.8| Mouse DNA sequence from clone RP23-145L13 on chr... 40 5.7
71emb|CR954969.10| Mouse DNA sequence from clone RP23-332J14 on ch... 40 5.7
72emb|AL670953.5| Mouse DNA sequence from clone RP23-233H9 on chro... 40 5.7
73emb|AL672050.7| Mouse DNA sequence from clone RP23-315F2 on chro... 40 5.7 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  135 bits (68), Expect = 1e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                            
Query: 305      acctgcaactaaaactgcgagttgctgaggaatgtgaccatgcatcgtgcgctctgaaac 364
                |||||| |||||||||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 25928211 acctgctactaaaactgtgagttgctgaggaatgtaaccatgcatcgtgcactctgaaac 25928152

                                                                        
Query: 365      attttgtcgatcttctgccaaaccttgctctggacatcaagaagtttcctcacttt 420
                | |||||| ||||||||||||||   |||||||||||| ||||| ||| |||||||
Sbjct: 25928151 actttgtctatcttctgccaaactaagctctggacatctagaagcttcttcacttt 25928096



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 280      gtatgcattgatttcagagatttg 303
                ||||||||||||||| ||||||||
Sbjct: 12739476 gtatgcattgatttccgagatttg 12739453
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>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0017B12
          Length = 157424

 Score =  135 bits (68), Expect = 1e-28
 Identities = 104/116 (89%)
 Strand = Plus / Minus

                                                                         
Query: 305   acctgcaactaaaactgcgagttgctgaggaatgtgaccatgcatcgtgcgctctgaaac 364
             |||||| |||||||||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 83309 acctgctactaaaactgtgagttgctgaggaatgtaaccatgcatcgtgcactctgaaac 83250

                                                                     
Query: 365   attttgtcgatcttctgccaaaccttgctctggacatcaagaagtttcctcacttt 420
             | |||||| ||||||||||||||   |||||||||||| ||||| ||| |||||||
Sbjct: 83249 actttgtctatcttctgccaaactaagctctggacatctagaagcttcttcacttt 83194
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 280      gtatgcattgatttcagagatttg 303
                ||||||||||||||||||||||||
Sbjct: 11043587 gtatgcattgatttcagagatttg 11043564



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 280      gtatgcattgatttcagagatttg 303
                ||||||||||||||||| ||||||
Sbjct: 13393010 gtatgcattgatttcagggatttg 13392987
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>dbj|AP005552.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1116_C03
          Length = 112383

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 280   gtatgcattgatttcagagatttg 303
             ||||||||||||||||||||||||
Sbjct: 69394 gtatgcattgatttcagagatttg 69371
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>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OSJNBa0004P20
          Length = 160410

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 280  gtatgcattgatttcagagatttg 303
            ||||||||||||||||||||||||
Sbjct: 2394 gtatgcattgatttcagagatttg 2371
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>emb|AL111675.1|CNS019IB Botrytis cinerea strain T4 cDNA library
          Length = 780

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 367 tttgtcgatcttctgccaaacc 388
           ||||||||||||||||||||||
Sbjct: 202 tttgtcgatcttctgccaaacc 223
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>gb|AC006036.3| Homo sapiens BAC clone RP11-215P16 from 7, complete sequence
          Length = 156840

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 249    cagaatggtacaacagccaca 269
              |||||||||||||||||||||
Sbjct: 156011 cagaatggtacaacagccaca 155991
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>ref|XM_475025.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3498

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 283  tgcattgatttcagagattt 302
            ||||||||||||||||||||
Sbjct: 1492 tgcattgatttcagagattt 1511
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>ref|XM_471288.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1914

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 283  tgcattgatttcagagattt 302
            ||||||||||||||||||||
Sbjct: 1039 tgcattgatttcagagattt 1058
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>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0005P21, complete sequence
          Length = 147381

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 280   gtatgcattgatttcagagatttg 303
             |||||||||||||| |||||||||
Sbjct: 92593 gtatgcattgattttagagatttg 92616
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>gb|BC077893.1| Xenopus laevis MGC80709 protein, mRNA (cDNA clone MGC:80709
            IMAGE:5511725), complete cds
          Length = 2037

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  tacaggaacaaaactgcaaa 146
            ||||||||||||||||||||
Sbjct: 1405 tacaggaacaaaactgcaaa 1424
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>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02,
             complete sequence
          Length = 146541

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   tgcattgatttcagagattt 302
             ||||||||||||||||||||
Sbjct: 98120 tgcattgatttcagagattt 98139
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>emb|CR954964.4| Mouse DNA sequence from clone RP24-201A22 on chromosome X, complete
             sequence
          Length = 59913

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    atgctgaagaagcattctag 48
             ||||||||||||||||||||
Sbjct: 30204 atgctgaagaagcattctag 30185
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>ref|XM_733144.1| Plasmodium chabaudi chabaudi hypothetical protein (PC302353.00.0)
           partial mRNA
          Length = 786

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 116 ttacaaaagaatacaggaacaaaa 139
           |||||||| |||||||||||||||
Sbjct: 403 ttacaaaataatacaggaacaaaa 426
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>ref|XM_738904.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000132.02.0)
           partial mRNA
          Length = 702

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 116 ttacaaaagaatacaggaacaaaa 139
           |||||||| |||||||||||||||
Sbjct: 403 ttacaaaataatacaggaacaaaa 426
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>emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1292H11, complete
             sequence
          Length = 152632

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 280   gtatgcattgatttcagagatttg 303
             ||||||||||||||| ||||||||
Sbjct: 31765 gtatgcattgatttccgagatttg 31788
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>emb|AL731636.3|OSJN00281 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0093G06,
             complete sequence
          Length = 127420

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   tgcattgatttcagagattt 302
             ||||||||||||||||||||
Sbjct: 53816 tgcattgatttcagagattt 53797
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>emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C12,
              complete sequence
          Length = 138715

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    tgcattgatttcagagattt 302
              ||||||||||||||||||||
Sbjct: 125691 tgcattgatttcagagattt 125672
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>emb|BX510641.9| Zebrafish DNA sequence from clone CH211-106M9 in linkage group 14,
             complete sequence
          Length = 161300

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    tataataaaatgctgaagaa 39
             ||||||||||||||||||||
Sbjct: 63294 tataataaaatgctgaagaa 63275
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>ref|XM_704208.1| PREDICTED: Danio rerio hypothetical protein LOC561590, transcript
           variant 27 (LOC561590), mRNA
          Length = 1707

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 382 ccaaaccttgctctggacatcaag 405
           ||||||||||||||||| ||||||
Sbjct: 692 ccaaaccttgctctggatatcaag 715
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>ref|XM_704206.1| PREDICTED: Danio rerio hypothetical protein LOC561590, transcript
            variant 25 (LOC561590), mRNA
          Length = 2600

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 382  ccaaaccttgctctggacatcaag 405
            ||||||||||||||||| ||||||
Sbjct: 1585 ccaaaccttgctctggatatcaag 1608
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>ref|XM_704205.1| PREDICTED: Danio rerio hypothetical protein LOC561590, transcript
           variant 24 (LOC561590), mRNA
          Length = 1668

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 382 ccaaaccttgctctggacatcaag 405
           ||||||||||||||||| ||||||
Sbjct: 653 ccaaaccttgctctggatatcaag 676
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>ref|XM_704204.1| PREDICTED: Danio rerio hypothetical protein LOC561590, transcript
            variant 23 (LOC561590), mRNA
          Length = 2171

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 382  ccaaaccttgctctggacatcaag 405
            ||||||||||||||||| ||||||
Sbjct: 1156 ccaaaccttgctctggatatcaag 1179
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>ref|XM_704203.1| PREDICTED: Danio rerio hypothetical protein LOC561590, transcript
           variant 22 (LOC561590), mRNA
          Length = 1787

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 382 ccaaaccttgctctggacatcaag 405
           ||||||||||||||||| ||||||
Sbjct: 772 ccaaaccttgctctggatatcaag 795
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>ref|XM_704202.1| PREDICTED: Danio rerio hypothetical protein LOC561590, transcript
           variant 21 (LOC561590), mRNA
          Length = 1493

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 382 ccaaaccttgctctggacatcaag 405
           ||||||||||||||||| ||||||
Sbjct: 478 ccaaaccttgctctggatatcaag 501
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>ref|XM_704191.1| PREDICTED: Danio rerio hypothetical protein LOC561590, transcript
            variant 10 (LOC561590), mRNA
          Length = 2521

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 382  ccaaaccttgctctggacatcaag 405
            ||||||||||||||||| ||||||
Sbjct: 1742 ccaaaccttgctctggatatcaag 1765
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>ref|XM_684306.1| PREDICTED: Danio rerio hypothetical protein LOC561590, transcript
            variant 1 (LOC561590), mRNA
          Length = 2757

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 382  ccaaaccttgctctggacatcaag 405
            ||||||||||||||||| ||||||
Sbjct: 1742 ccaaaccttgctctggatatcaag 1765
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>emb|CR406732.1| Gallus gallus finished cDNA, clone ChEST989n3
          Length = 1029

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 aacaaaactgcaaaactgtt 152
           ||||||||||||||||||||
Sbjct: 326 aacaaaactgcaaaactgtt 345
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>emb|BX927321.6| Mouse DNA sequence from clone RP23-144M4 on chromosome X, complete
             sequence
          Length = 233474

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    atgctgaagaagcattctag 48
             ||||||||||||||||||||
Sbjct: 90641 atgctgaagaagcattctag 90660
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>emb|BX571823.6| Zebrafish DNA sequence from clone CH211-146L10 in linkage group 24,
              complete sequence
          Length = 154395

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 382    ccaaaccttgctctggacatcaag 405
              ||||||||||||||||| ||||||
Sbjct: 112433 ccaaaccttgctctggatatcaag 112410
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>emb|BX936287.9| Mouse DNA sequence from clone RP23-221M16 on chromosome X, complete
              sequence
          Length = 184662

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     atgctgaagaagcattctag 48
              ||||||||||||||||||||
Sbjct: 136057 atgctgaagaagcattctag 136076



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   atgctgaagaagcattctag 48
            ||||||||||||||||||||
Sbjct: 5258 atgctgaagaagcattctag 5277
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>emb|BX936348.7| Mouse DNA sequence from clone RP23-348D19 on chromosome X, complete
             sequence
          Length = 62362

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    atgctgaagaagcattctag 48
             ||||||||||||||||||||
Sbjct: 39005 atgctgaagaagcattctag 39024
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>emb|BX936354.6| Mouse DNA sequence from clone RP23-354D7 on chromosome X, complete
             sequence
          Length = 72633

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    atgctgaagaagcattctag 48
             ||||||||||||||||||||
Sbjct: 29710 atgctgaagaagcattctag 29729
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 283     tgcattgatttcagagattt 302
               ||||||||||||||||||||
Sbjct: 9527573 tgcattgatttcagagattt 9527554



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 283     tgcattgatttcagagattt 302
               ||||||||||||||||||||
Sbjct: 8869507 tgcattgatttcagagattt 8869488



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 280     gtatgcattgatttcagagatttg 303
               ||||||||||||||| ||||||||
Sbjct: 1372741 gtatgcattgatttccgagatttg 1372764
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 280      gtatgcattgatttcagagatttg 303
                |||||||||||||| |||||||||
Sbjct: 20217016 gtatgcattgattttagagatttg 20217039



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 280      gtatgcattgatttcagagatttg 303
                |||||||||||||| |||||||||
Sbjct: 17259748 gtatgcattgattttagagatttg 17259771



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 283      tgcattgatttcagagattt 302
                ||||||||||||||||||||
Sbjct: 14369110 tgcattgatttcagagattt 14369129
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 280      gtatgcattgatttcagagatttg 303
                |||||||||||||| |||||||||
Sbjct: 11521195 gtatgcattgattttagagatttg 11521172
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 280      gtatgcattgatttcagagatttg 303
                ||||||||||||||| ||||||||
Sbjct: 19970451 gtatgcattgatttccgagatttg 19970428



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 280      gtatgcattgatttcagagatttg 303
                |||||||||||||| |||||||||
Sbjct: 10700471 gtatgcattgattttagagatttg 10700494



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 280     gtatgcattgatttcagagatttg 303
               |||||||||||||| |||||||||
Sbjct: 4868539 gtatgcattgattttagagatttg 4868516



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 283     tgcattgatttcagagattt 302
               ||||||||||||||||||||
Sbjct: 2728045 tgcattgatttcagagattt 2728026



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 283     tgcattgatttcagagattt 302
               ||||||||||||||||||||
Sbjct: 1963986 tgcattgatttcagagattt 1964005
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 280      gtatgcattgatttcagagatttg 303
                |||||||||||||| |||||||||
Sbjct: 16128614 gtatgcattgattttagagatttg 16128591



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 280      gtatgcattgatttcagagatttg 303
                |||||||||||||| |||||||||
Sbjct: 15756890 gtatgcattgattttagagatttg 15756913
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 283      tgcattgatttcagagattt 302
                ||||||||||||||||||||
Sbjct: 14018043 tgcattgatttcagagattt 14018062
to top
>emb|AL662940.3|OSJN00142 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0035A12,
             complete sequence
          Length = 130499

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 280   gtatgcattgatttcagagatttg 303
             ||||||||||||||| ||||||||
Sbjct: 75534 gtatgcattgatttccgagatttg 75557
to top
>gb|AC010663.6| Drosophila melanogaster 3L BAC RP98-17M18 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 193914

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 337    tgtgaccatgcatcgtgcgc 356
              ||||||||||||||||||||
Sbjct: 107456 tgtgaccatgcatcgtgcgc 107475
to top
>gb|AC117276.7| Drosophila melanogaster 3 BAC RP98-29A7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 146426

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    tgtgaccatgcatcgtgcgc 356
              ||||||||||||||||||||
Sbjct: 133052 tgtgaccatgcatcgtgcgc 133033
to top
>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0038F09
          Length = 166568

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 280   gtatgcattgatttcagagatttg 303
             |||||||||||||| |||||||||
Sbjct: 98947 gtatgcattgattttagagatttg 98924
to top
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0433E10
          Length = 144643

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 280    gtatgcattgatttcagagatttg 303
              ||||||||||||||| ||||||||
Sbjct: 138629 gtatgcattgatttccgagatttg 138606
to top
>emb|BX247886.7| Zebrafish DNA sequence from clone DKEY-253J12 in linkage group 24,
             complete sequence
          Length = 149992

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 382   ccaaaccttgctctggacatcaag 405
             ||||||||||||||||| ||||||
Sbjct: 40136 ccaaaccttgctctggatatcaag 40113
to top
>dbj|AP005741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470H09
          Length = 141257

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    tgcattgatttcagagattt 302
              ||||||||||||||||||||
Sbjct: 106326 tgcattgatttcagagattt 106307
to top
>dbj|AP005477.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0039F24
          Length = 132107

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 280   gtatgcattgatttcagagatttg 303
             ||||||||||||||| ||||||||
Sbjct: 92997 gtatgcattgatttccgagatttg 92974
to top
>dbj|AP004811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0019A05
          Length = 144255

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 280   gtatgcattgatttcagagatttg 303
             ||||||||||||||| ||||||||
Sbjct: 40253 gtatgcattgatttccgagatttg 40230
to top
>dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0075N02
          Length = 186945

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 280    gtatgcattgatttcagagatttg 303
              |||||||||||||| |||||||||
Sbjct: 154747 gtatgcattgattttagagatttg 154770
to top
>emb|BX664729.3| Mouse DNA sequence from clone RP24-251C18 on chromosome X, complete
             sequence
          Length = 52210

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    atgctgaagaagcattctag 48
             ||||||||||||||||||||
Sbjct: 51731 atgctgaagaagcattctag 51750
to top
>dbj|AP005861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0025E03
          Length = 156806

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 280   gtatgcattgatttcagagatttg 303
             ||||||||||||||||| ||||||
Sbjct: 64354 gtatgcattgatttcagggatttg 64331
to top
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0680F05
          Length = 185495

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   tgcattgatttcagagattt 302
             ||||||||||||||||||||
Sbjct: 89184 tgcattgatttcagagattt 89203
to top
>dbj|AP005618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0509D04
          Length = 140666

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    tgcattgatttcagagattt 302
              ||||||||||||||||||||
Sbjct: 113021 tgcattgatttcagagattt 113040
to top
>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1122_A12
          Length = 149011

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 280   gtatgcattgatttcagagatttg 303
             |||||||||||||| |||||||||
Sbjct: 27793 gtatgcattgattttagagatttg 27770
to top
>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056D04
          Length = 158118

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 280   gtatgcattgatttcagagatttg 303
             |||||||||||||| |||||||||
Sbjct: 73333 gtatgcattgattttagagatttg 73310
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>emb|AL672179.9| Mouse DNA sequence from clone RP23-468C6 on chromosome X, complete
            sequence
          Length = 181910

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   atgctgaagaagcattctag 48
            ||||||||||||||||||||
Sbjct: 1521 atgctgaagaagcattctag 1540
to top
>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0477F03
          Length = 176120

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 280   gtatgcattgatttcagagatttg 303
             ||||||||||||||| ||||||||
Sbjct: 42302 gtatgcattgatttccgagatttg 42279
to top
>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1118_F05
          Length = 134247

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 280    gtatgcattgatttcagagatttg 303
              |||||||||||||| |||||||||
Sbjct: 128111 gtatgcattgattttagagatttg 128134
to top
>gb|AC005510.3|AC005510 Homo sapiens chromosome 4 clone B368A9 map 4q25, complete sequence
          Length = 168468

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    cagcagcacaatctctgtgg 182
              ||||||||||||||||||||
Sbjct: 138094 cagcagcacaatctctgtgg 138075
to top
>gb|AE002786.2| Drosophila melanogaster chromosome 3L, section 81 of 83 of the complete
             sequence
          Length = 100825

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 337   tgtgaccatgcatcgtgcgc 356
             ||||||||||||||||||||
Sbjct: 27436 tgtgaccatgcatcgtgcgc 27455
to top
>dbj|AP002008.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-794P6, complete
              sequences
          Length = 194973

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     cattataataaaatgctgaa 36
              ||||||||||||||||||||
Sbjct: 117970 cattataataaaatgctgaa 117989
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 280      gtatgcattgatttcagagatttg 303
                |||||||||||||| |||||||||
Sbjct: 11600384 gtatgcattgattttagagatttg 11600361
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 280      gtatgcattgatttcagagatttg 303
                |||||||||||||| |||||||||
Sbjct: 20143230 gtatgcattgattttagagatttg 20143253



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 280      gtatgcattgatttcagagatttg 303
                |||||||||||||| |||||||||
Sbjct: 17214119 gtatgcattgattttagagatttg 17214142



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 283      tgcattgatttcagagattt 302
                ||||||||||||||||||||
Sbjct: 14323392 tgcattgatttcagagattt 14323411
to top
>emb|AL662971.2|OSJN00172 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061A09,
            complete sequence
          Length = 160462

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  tgcattgatttcagagattt 302
            ||||||||||||||||||||
Sbjct: 9679 tgcattgatttcagagattt 9660
to top
>emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb0090H23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134370

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   tgcattgatttcagagattt 302
             ||||||||||||||||||||
Sbjct: 76314 tgcattgatttcagagattt 76333
to top
>emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116_G12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152862

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 280   gtatgcattgatttcagagatttg 303
             |||||||||||||| |||||||||
Sbjct: 81250 gtatgcattgattttagagatttg 81273
to top
>emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa0021B03 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 154826

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 280    gtatgcattgatttcagagatttg 303
              |||||||||||||| |||||||||
Sbjct: 143621 gtatgcattgattttagagatttg 143598
to top
>emb|CR354601.14| Mouse DNA sequence from clone RP23-395J7 on chromosome X, complete
             sequence
          Length = 96754

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    atgctgaagaagcattctag 48
             ||||||||||||||||||||
Sbjct: 33114 atgctgaagaagcattctag 33133
to top
>emb|CR954967.11| Mouse DNA sequence from clone RP24-329J6 on chromosome X, complete
              sequence
          Length = 240890

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     atgctgaagaagcattctag 48
              ||||||||||||||||||||
Sbjct: 174603 atgctgaagaagcattctag 174622



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    atgctgaagaagcattctag 48
             ||||||||||||||||||||
Sbjct: 83600 atgctgaagaagcattctag 83619
to top
>emb|CR954961.8| Mouse DNA sequence from clone RP23-145L13 on chromosome X, complete
             sequence
          Length = 59596

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    atgctgaagaagcattctag 48
             ||||||||||||||||||||
Sbjct: 50209 atgctgaagaagcattctag 50228
to top
>emb|CR954969.10| Mouse DNA sequence from clone RP23-332J14 on chromosome X, complete
              sequence
          Length = 204157

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     atgctgaagaagcattctag 48
              ||||||||||||||||||||
Sbjct: 122455 atgctgaagaagcattctag 122436



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    atgctgaagaagcattctag 48
             ||||||||||||||||||||
Sbjct: 32871 atgctgaagaagcattctag 32852
to top
>emb|AL670953.5| Mouse DNA sequence from clone RP23-233H9 on chromosome X, complete
              sequence
          Length = 209986

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     atgctgaagaagcattctag 48
              ||||||||||||||||||||
Sbjct: 136807 atgctgaagaagcattctag 136826
to top
>emb|AL672050.7| Mouse DNA sequence from clone RP23-315F2 on chromosome X, complete
              sequence
          Length = 174151

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     atgctgaagaagcattctag 48
              ||||||||||||||||||||
Sbjct: 169811 atgctgaagaagcattctag 169830



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    atgctgaagaagcattctag 48
             ||||||||||||||||||||
Sbjct: 53778 atgctgaagaagcattctag 53797


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,307,807
Number of Sequences: 3902068
Number of extensions: 4307807
Number of successful extensions: 84421
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83754
Number of HSP's gapped (non-prelim): 667
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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