ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl47f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 107 3e-20
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
3dbj|AK101563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
4dbj|AK065819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
5dbj|AB101645.1| Oryza sativa (japonica cultivar-group) Roc2 mRNA... 107 3e-20
6gb|AY107087.1| Zea mays PCO119798 mRNA sequence 92 2e-15
7gb|AY112016.1| Zea mays CL52199_-1 mRNA sequence 76 1e-10
8emb|AJ250987.1|ZMA250987 Zea mays mRNA for OCL5 protein (ocl5 gene) 50 0.006
9gb|AY108675.1| Zea mays PCO066290 mRNA sequence 50 0.006
10gb|AF530914.1| Gossypium hirsutum homeodomain protein GhHOX2 mRN... 46 0.086
11emb|AL096754.1|HSCN2E9 Human DNA sequence from clone LL22NC03-2E... 44 0.34
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
13gb|AY130425.1| Myxine glutinosa nuclear receptor subfamily 2 gro... 44 0.34
14dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
15emb|CR387989.9| Zebrafish DNA sequence from clone DKEY-101P2 in ... 42 1.4
16dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
17dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
18dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
19gb|AC132456.5| Mus musculus BAC clone RP23-134L6 from 1, complet... 42 1.4
20emb|AL591209.17| Mouse DNA sequence from clone RP23-309H19 on ch... 42 1.4
21gb|AY591640.1| Mus musculus clone IgK2-35 immunoglobulin kappa-l... 40 5.3
22gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, co... 40 5.3
23gb|AY022690.1| Oryza sativa microsatellite MRG5015 containing (C... 40 5.3
24gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
25gb|AC159715.5| Mus musculus 6 BAC RP23-367A13 (Roswell Park Canc... 40 5.3
26gb|AC149494.4| Medicago truncatula clone mth2-116m7, complete se... 40 5.3
27emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 5.3
28emb|Z33995.1|KLPHO5G K.lactis (CBS 2359/152) PHO5 gene for acid ... 40 5.3
29emb|X61394.1|RNCCB R.norvegicus mRNA for brain calcium channel b... 40 5.3
30emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 5.3
31emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 5.3
32emb|BX842651.1| Bdellovibrio bacteriovorus complete genome, stra... 40 5.3
33emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, ... 40 5.3
34gb|AC090994.8| Homo sapiens chromosome 8, clone RP11-536K17, com... 40 5.3
35gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-2... 40 5.3
36emb|BX890589.11| Zebrafish DNA sequence from clone DKEY-14I16 in... 40 5.3
37dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
39ref|NM_017346.1| Rattus norvegicus calcium channel, voltage-depe... 40 5.3
40dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
41dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
42dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
43gb|AC154595.2| Mus musculus BAC clone RP23-353D15 from 13, compl... 40 5.3
44gb|AC154006.3| Mus musculus 6 BAC RP24-314D8 (Roswell Park Cance... 40 5.3
45dbj|AK072845.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
46emb|BX957260.10| Zebrafish DNA sequence from clone DKEY-1N7 in l... 40 5.3
47dbj|AK063535.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
48emb|AL974310.15| Zebrafish DNA sequence from clone DKEY-14J6, co... 40 5.3
49gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
50emb|AJ231200.1|MMU231200 Mus musculus IgVk cu2 gene 40 5.3
51emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on ch... 40 5.3 
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
              complete sequence
          Length = 166951

 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                          
Query: 231    aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 290
              |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 107244 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 107303

                            
Query: 291    tgcgtagtgatgac 304
              ||||||||| ||||
Sbjct: 107304 tgcgtagtggtgac 107317
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                            
Query: 231      aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 290
                |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 31934378 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 31934437

                              
Query: 291      tgcgtagtgatgac 304
                ||||||||| ||||
Sbjct: 31934438 tgcgtagtggtgac 31934451
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>dbj|AK101563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050E18, full
            insert sequence
          Length = 2264

 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                        
Query: 231  aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 290
            |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 2023 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 1964

                          
Query: 291  tgcgtagtgatgac 304
            ||||||||| ||||
Sbjct: 1963 tgcgtagtggtgac 1950
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>dbj|AK065819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043D01, full
            insert sequence
          Length = 2343

 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                        
Query: 231  aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 290
            |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 2168 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 2109

                          
Query: 291  tgcgtagtgatgac 304
            ||||||||| ||||
Sbjct: 2108 tgcgtagtggtgac 2095
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>dbj|AB101645.1| Oryza sativa (japonica cultivar-group) Roc2 mRNA for GL2-type
            homeodomain protein, complete cds
          Length = 3063

 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Minus

                                                                        
Query: 231  aggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccgccct 290
            |||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||
Sbjct: 2871 aggtagcagcatccgagaggcgaacatgaagaggaagtcaatacccgaaccaaccgccct 2812

                          
Query: 291  tgcgtagtgatgac 304
            ||||||||| ||||
Sbjct: 2811 tgcgtagtggtgac 2798
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>gb|AY107087.1| Zea mays PCO119798 mRNA sequence
          Length = 736

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                       
Query: 227 tcagaggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccg 286
           ||||||| |||||||||||||||||| ||| ||||| |||||||||||||||||||||  
Sbjct: 469 tcagaggaagcagcatccgagaggccaacatgaagaggaagtcaatacccgaaccaacta 410

                             
Query: 287 cccttgcgtagtgatgac 304
           ||||||||| ||| ||||
Sbjct: 409 cccttgcgtcgtggtgac 392
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>gb|AY112016.1| Zea mays CL52199_-1 mRNA sequence
          Length = 526

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                       
Query: 227 tcagaggtagcagcatccgagaggccgacacgaagatgaagtcaatacccgaaccaaccg 286
           |||||||||||||||||||||||||| ||| | ||| |||||||||| |  |||||||  
Sbjct: 83  tcagaggtagcagcatccgagaggccaacatgtagaggaagtcaatatcttaaccaacaa 142

                             
Query: 287 cccttgcgtagtgatgac 304
           ||||||||||||| ||||
Sbjct: 143 cccttgcgtagtggtgac 160
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>emb|AJ250987.1|ZMA250987 Zea mays mRNA for OCL5 protein (ocl5 gene)
          Length = 3010

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 264  gaagtcaatacccgaaccaaccgcccttgcgtagtgatgac 304
            ||||||||||||||||||| || ||||||| ||||| ||||
Sbjct: 2667 gaagtcaatacccgaaccatccccccttgcatagtggtgac 2627
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>gb|AY108675.1| Zea mays PCO066290 mRNA sequence
          Length = 654

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 264 gaagtcaatacccgaaccaaccgcccttgcgtagtgatgac 304
           ||||||||||||||||||| || ||||||| ||||| ||||
Sbjct: 320 gaagtcaatacccgaaccatccccccttgcatagtggtgac 280
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>gb|AF530914.1| Gossypium hirsutum homeodomain protein GhHOX2 mRNA, complete cds
          Length = 2679

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 263  tgaagtcaatacccgaaccaaccgcccttgc 293
            |||||||||||||||||||| || |||||||
Sbjct: 2616 tgaagtcaatacccgaaccacccacccttgc 2586
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>emb|AL096754.1|HSCN2E9 Human DNA sequence from clone LL22NC03-2E9 on chromosome 22, complete
            sequence
          Length = 19350

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 208  agaaccctagaaaagaaactca 229
            ||||||||||||||||||||||
Sbjct: 6754 agaaccctagaaaagaaactca 6733
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 110      agcactggaagtctgaaacagc 131
                ||||||||||||||||||||||
Sbjct: 18782758 agcactggaagtctgaaacagc 18782779



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 112      cactggaagtctgaaacagcagca 135
                ||||| ||||||||||||||||||
Sbjct: 26276081 cactgaaagtctgaaacagcagca 26276104
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>gb|AY130425.1| Myxine glutinosa nuclear receptor subfamily 2 group F-like (NR2F2)
           mRNA, partial sequence
          Length = 861

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 264 gaagtcaatacccgaaccaacc 285
           ||||||||||||||||||||||
Sbjct: 743 gaagtcaatacccgaaccaacc 764
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>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0055I24
          Length = 155872

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 110    agcactggaagtctgaaacagc 131
              ||||||||||||||||||||||
Sbjct: 115046 agcactggaagtctgaaacagc 115067
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>emb|CR387989.9| Zebrafish DNA sequence from clone DKEY-101P2 in linkage group 18,
             complete sequence
          Length = 96438

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   gaattacagacagactgactg 176
             |||||||||||||||||||||
Sbjct: 60930 gaattacagacagactgactg 60950
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 93       ttctgctgcacctacaaagca 113
                |||||||||||||||||||||
Sbjct: 39020086 ttctgctgcacctacaaagca 39020106
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>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0674H09
          Length = 142955

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    ttctgctgcacctacaaagca 113
             |||||||||||||||||||||
Sbjct: 93719 ttctgctgcacctacaaagca 93739
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>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0506A10
          Length = 145265

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    ttctgctgcacctacaaagca 113
             |||||||||||||||||||||
Sbjct: 38066 ttctgctgcacctacaaagca 38086
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>gb|AC132456.5| Mus musculus BAC clone RP23-134L6 from 1, complete sequence
          Length = 204402

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 64     acagacagacagatgggcaca 84
              |||||||||||||||||||||
Sbjct: 123156 acagacagacagatgggcaca 123176
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>emb|AL591209.17| Mouse DNA sequence from clone RP23-309H19 on chromosome 11, complete
             sequence
          Length = 199634

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 64    acagacagacagatgggcaca 84
             |||||||||||||||||||||
Sbjct: 82303 acagacagacagatgggcaca 82323
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>gb|AY591640.1| Mus musculus clone IgK2-35 immunoglobulin kappa-like gene, partial
            sequence
          Length = 2723

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   acccacaatccaaagcaaca 66
            ||||||||||||||||||||
Sbjct: 1051 acccacaatccaaagcaaca 1032
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>gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, complete sequence
          Length = 204464

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     acagacagacagatgggcac 83
              ||||||||||||||||||||
Sbjct: 164899 acagacagacagatgggcac 164918
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>gb|AY022690.1| Oryza sativa microsatellite MRG5015 containing (CCG)X8, genomic
           sequence
          Length = 224

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 gaagaaccctagaaaagaaa 225
           ||||||||||||||||||||
Sbjct: 101 gaagaaccctagaaaagaaa 82
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>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035I01, complete sequence
          Length = 147813

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   gaagaaccctagaaaagaaa 225
             ||||||||||||||||||||
Sbjct: 20438 gaagaaccctagaaaagaaa 20457
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>gb|AC159715.5| Mus musculus 6 BAC RP23-367A13 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 209869

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    acccacaatccaaagcaaca 66
             ||||||||||||||||||||
Sbjct: 31103 acccacaatccaaagcaaca 31122
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>gb|AC149494.4| Medicago truncatula clone mth2-116m7, complete sequence
          Length = 95710

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   aagtcaatacccgaaccaac 284
             ||||||||||||||||||||
Sbjct: 87721 aagtcaatacccgaaccaac 87702
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>emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 9
          Length = 81835

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaagtcaatacccgaaccaa 283
             ||||||||||||||||||||
Sbjct: 21460 gaagtcaatacccgaaccaa 21479
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>emb|Z33995.1|KLPHO5G K.lactis (CBS 2359/152) PHO5 gene for acid phosphatase
          Length = 2772

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 acaaagcactggaagtctgaaaca 129
           |||||||||||||||| |||||||
Sbjct: 172 acaaagcactggaagtgtgaaaca 195
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>emb|X61394.1|RNCCB R.norvegicus mRNA for brain calcium channel beta subunit
          Length = 3293

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   acagacagacagatgggcac 83
            ||||||||||||||||||||
Sbjct: 3190 acagacagacagatgggcac 3171
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>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL
             Y-1140 of Kluyveromyces lactis
          Length = 1715506

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   acaaagcactggaagtctgaaaca 129
             |||||||||||||||| |||||||
Sbjct: 17223 acaaagcactggaagtgtgaaaca 17200
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>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL
             Y-1140 of Kluyveromyces lactis
          Length = 1320834

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   acaaagcactggaagtctgaaaca 129
             |||||||||||||||| |||||||
Sbjct: 17267 acaaagcactggaagtgtgaaaca 17244
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>emb|BX842651.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 6/11
          Length = 346161

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 357    tttccccggtcgaattcaca 376
              ||||||||||||||||||||
Sbjct: 220286 tttccccggtcgaattcaca 220305
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>emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 47
          Length = 198067

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gaagtcaatacccgaaccaa 283
             ||||||||||||||||||||
Sbjct: 16472 gaagtcaatacccgaaccaa 16491
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>gb|AC090994.8| Homo sapiens chromosome 8, clone RP11-536K17, complete sequence
          Length = 200326

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    gctacaaaattataaaccca 51
             ||||||||||||||||||||
Sbjct: 19155 gctacaaaattataaaccca 19136
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>gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-274F23, complete sequence
          Length = 215113

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     acagacagacagatgggcac 83
              ||||||||||||||||||||
Sbjct: 115134 acagacagacagatgggcac 115115
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>emb|BX890589.11| Zebrafish DNA sequence from clone DKEY-14I16 in linkage group 5, complete
              sequence
          Length = 204925

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     aacagacagacagatgggca 82
              ||||||||||||||||||||
Sbjct: 186637 aacagacagacagatgggca 186618
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 266     agtcaatacccgaaccaacc 285
               ||||||||||||||||||||
Sbjct: 2027850 agtcaatacccgaaccaacc 2027869
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 206      gaagaaccctagaaaagaaa 225
                ||||||||||||||||||||
Sbjct: 29535936 gaagaaccctagaaaagaaa 29535955
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>ref|NM_017346.1| Rattus norvegicus calcium channel, voltage-dependent, beta 1 subunit
            (Cacnb1), mRNA
          Length = 3293

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   acagacagacagatgggcac 83
            ||||||||||||||||||||
Sbjct: 3190 acagacagacagatgggcac 3171
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>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0455H11
          Length = 101607

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 112   cactggaagtctgaaacagcagca 135
             ||||| ||||||||||||||||||
Sbjct: 50709 cactgaaagtctgaaacagcagca 50732
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>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1613_G04
          Length = 135357

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   agtcaatacccgaaccaacc 285
             ||||||||||||||||||||
Sbjct: 21380 agtcaatacccgaaccaacc 21399
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>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0680F05
          Length = 185495

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    agtcaatacccgaaccaacc 285
              ||||||||||||||||||||
Sbjct: 153048 agtcaatacccgaaccaacc 153067
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>gb|AC154595.2| Mus musculus BAC clone RP23-353D15 from 13, complete sequence
          Length = 180529

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   agaaaagaaactcagaggta 235
             ||||||||||||||||||||
Sbjct: 84895 agaaaagaaactcagaggta 84914
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>gb|AC154006.3| Mus musculus 6 BAC RP24-314D8 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 151766

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    acccacaatccaaagcaaca 66
             ||||||||||||||||||||
Sbjct: 99586 acccacaatccaaagcaaca 99605
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>dbj|AK072845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142J09, full
           insert sequence
          Length = 1284

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 gaagaaccctagaaaagaaa 225
           ||||||||||||||||||||
Sbjct: 55  gaagaaccctagaaaagaaa 36
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>emb|BX957260.10| Zebrafish DNA sequence from clone DKEY-1N7 in linkage group 19,
             complete sequence
          Length = 188873

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   gcaaatgttttcttgcatgg 338
             ||||||||||||||||||||
Sbjct: 61717 gcaaatgttttcttgcatgg 61736
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>dbj|AK063535.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B10, full
           insert sequence
          Length = 1161

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 gaagaaccctagaaaagaaa 225
           ||||||||||||||||||||
Sbjct: 56  gaagaaccctagaaaagaaa 37
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>emb|AL974310.15| Zebrafish DNA sequence from clone DKEY-14J6, complete sequence
          Length = 183864

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   gcaaatgttttcttgcatgg 338
             ||||||||||||||||||||
Sbjct: 79430 gcaaatgttttcttgcatgg 79411
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>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17,
              complete sequence
          Length = 134631

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    gaagaaccctagaaaagaaa 225
              ||||||||||||||||||||
Sbjct: 120206 gaagaaccctagaaaagaaa 120225
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>emb|AJ231200.1|MMU231200 Mus musculus IgVk cu2 gene
          Length = 905

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 47  acccacaatccaaagcaaca 66
           ||||||||||||||||||||
Sbjct: 167 acccacaatccaaagcaaca 148
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>emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on chromosome 11, complete
              sequence
          Length = 222330

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     aaagcaacagacagacagat 77
              ||||||||||||||||||||
Sbjct: 109680 aaagcaacagacagacagat 109661


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,903,396
Number of Sequences: 3902068
Number of extensions: 3903396
Number of successful extensions: 93563
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93316
Number of HSP's gapped (non-prelim): 247
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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