>TEGU_SHV21 (Q01056) Probable large tegument protein|
          Length = 2469

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +2

Query: 107  PLLSITHKYKTCHVLNQHIQYL-L*SSSSTHEYKNLL 214
            P   I H Y T  V N HI  + L ++S+ H+YK++L
Sbjct: 2100 PTFKIEHDYNTNSVYNNHINNINLTNNSTYHQYKDVL 2136

>LDH2_LISMO (Q8Y6Z6) L-lactate dehydrogenase 2 (EC 1.1.1.27) (L-LDH 2)|
          Length = 311

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
 Frame = -2

Query: 179 IKGGIECVDLVHGKSC---TYELWKVEGLDKSR-----CWLIMASLIRFRQLCLEE 36
           +KGG   + L+    C   TY++WK+ GL + R      WL      R R+L  E+
Sbjct: 109 MKGGFNGIFLIATNPCDIITYQVWKLSGLPRERVLGTGVWL---DTTRLRRLLAEK 161

>LDH2_LISMF (Q71ZD6) L-lactate dehydrogenase 2 (EC 1.1.1.27) (L-LDH 2)|
          Length = 311

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
 Frame = -2

Query: 179 IKGGIECVDLVHGKSC---TYELWKVEGLDKSR-----CWLIMASLIRFRQLCLEE 36
           +KGG   + L+    C   TY++WK+ GL + R      WL      R R+L  E+
Sbjct: 109 MKGGFNGIFLIATNPCDIITYQVWKLSGLPRERVLGTGVWL---DTTRLRRLLAEK 161

>ELOA1_HUMAN (Q14241) Transcription elongation factor B polypeptide 3 (RNA|
           polymerase II transcription factor SIII subunit A1)
           (SIII p110) (Elongin A) (EloA) (Elongin 110 kDa subunit)
          Length = 772

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -1

Query: 351 KGAA*ACTRFLEKGKHKIRVPQGEFLTSVDKPATSS 244
           KGA     +  EKG + ++ P+G+  T++D+ +  S
Sbjct: 352 KGAGDLLPKVKEKGSNNLKTPEGKVKTNLDRKSLGS 387

>POP1_HUMAN (Q99575) Ribonucleases P/MRP protein subunit POP1 (EC 3.1.26.5)|
           (hPOP1)
          Length = 1024

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 224 LTHFPQKELVAGLSTEVKNSPCGTRILCLPFSRNLVQAH 340
           L HFP+  +   LS   K SP    ++C+P   + +Q H
Sbjct: 849 LGHFPRALVWVSLSLLSKGSPEPHTMICVPAKEDFLQLH 887


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,920,384
Number of Sequences: 219361
Number of extensions: 814204
Number of successful extensions: 1907
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)