Clone Information

BLAST Search Result

Clone Name	rbastl47e03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	K1914_MOUSE (Q5DTU0) Protein KIAA1914	36	0.027
2	EXTN_MAIZE (P14918) Extensin precursor (Proline-rich glycoprotein)	32	0.39
3	AMELX_HUMAN (Q99217) Amelogenin, X isoform precursor	29	0.50
4	TWIST_DROVI (Q9TX44) Protein twist	31	0.67
5	EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)	31	0.67
6	MAGD1_HUMAN (Q9Y5V3) Melanoma-associated antigen D1 (MAGE-D1 ant...	31	0.88
7	POLG_EC30B (Q9WN78) Genome polyprotein [Contains: Coat protein V...	31	0.88
8	MAGD1_PIG (Q6ITT4) Melanoma-associated antigen D1 (MAGE-D1 antigen)	31	0.88
9	MAGD1_RAT (Q9ES73) Melanoma-associated antigen D1 (MAGE-D1 antig...	31	0.88
10	MAGD1_MOUSE (Q9QYH6) Melanoma-associated antigen D1 (MAGE-D1 ant...	31	0.88
11	PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-pho...	30	1.1
12	TALA_POVMC (P12905) Large T antigen	30	1.1
13	BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dep...	30	1.5
14	SOX9_PIG (O18896) Transcription factor SOX-9	30	2.0
15	TFE3_MOUSE (Q64092) Transcription factor E3 (Fragment)	29	2.6
16	UL79_HCMVA (P16752) Protein UL79	29	3.3
17	MEF2A_MOUSE (Q60929) Myocyte-specific enhancer factor 2A	29	3.3
18	MIG15_CAEEL (Q23356) Serine/threonine-protein kinase mig-15 (EC ...	29	3.3
19	SIN3A_HUMAN (Q96ST3) Paired amphipathic helix protein Sin3a (Tra...	29	3.3
20	VGLL_PRVIF (P52511) Glycoprotein L precursor	28	4.4
21	PAK3_RAT (Q62829) Serine/threonine-protein kinase PAK 3 (EC 2.7....	28	4.4
22	BRWD1_MOUSE (Q921C3) Bromodomain and WD-repeat domain-containing...	28	4.4
23	P54_ENTFC (P13692) Protein P54 precursor	28	4.4
24	ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUM...	28	4.4
25	PAK3_MOUSE (Q61036) Serine/threonine-protein kinase PAK 3 (EC 2....	28	5.7
26	VE4_HPV51 (P26548) Probable protein E4	28	5.7
27	MEF2A_HUMAN (Q02078) Myocyte-specific enhancer factor 2A (Serum ...	28	5.7
28	ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atr...	28	5.7
29	GHRHR_HUMAN (Q02643) Growth hormone-releasing hormone receptor p...	28	5.7
30	TRI66_HUMAN (O15016) Tripartite motif protein 66	28	5.7
31	TFE3_HUMAN (P19532) Transcription factor E3	28	5.7
32	SPTA3_MOUSE (Q9D9T6) Spermatogenesis-associated protein 3 (Testi...	28	5.7
33	ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atr...	28	5.7
34	GPR88_HUMAN (Q9GZN0) Probable G-protein coupled receptor 88 (Str...	28	5.7
35	SIN3A_MOUSE (Q60520) Paired amphipathic helix protein Sin3a (Tra...	28	7.4
36	GLI1_MOUSE (P47806) Zinc finger protein GLI1 (Glioma-associated ...	28	7.4
37	WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)	28	7.4
38	PDE4D_RAT (P14270) cAMP-specific 3',5'-cyclic phosphodiesterase ...	28	7.4
39	ALX4_HUMAN (Q9H161) Homeobox protein aristaless-like 4	28	7.4
40	GRB7_HUMAN (Q14451) Growth factor receptor-bound protein 7 (GRB7...	28	7.4
41	CCG8_NEUCR (Q01306) Clock-controlled protein 8	28	7.4
42	TCF20_MOUSE (Q9EPQ8) Transcription factor 20 (Stromelysin 1 PDGF...	28	7.4
43	WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)	28	7.4
44	FETUA_PANTR (Q9N2D0) Alpha-2-HS-glycoprotein precursor (Fetuin-A...	27	9.7
45	FETUA_HUMAN (P02765) Alpha-2-HS-glycoprotein precursor (Fetuin-A...	27	9.7
46	RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-ass...	27	9.7
47	CCNK_HUMAN (O75909) Cyclin-K	27	9.7
48	SP7_HUMAN (Q8TDD2) Transcription factor Sp7 (Zinc finger protein...	27	9.7
49	FIBL_BOMMO (P21828) Fibroin light chain precursor (Fib-L) (L-fib...	27	9.7
50	DYC1_CAEEL (Q8STF6) Dystrophin-like protein 1 (Dyb-1-binding and...	27	9.7
51	PDE1C_MOUSE (Q64338) Calcium/calmodulin-dependent 3',5'-cyclic n...	27	9.7
52	BAB2_DROME (Q9W0K4) Protein bric-a-brac 2	27	9.7
53	PDE1C_RAT (Q63421) Calcium/calmodulin-dependent 3',5'-cyclic nuc...	27	9.7

>K1914_MOUSE (Q5DTU0) Protein KIAA1914|
          Length = 825

 Score = 35.8 bits (81), Expect = 0.027
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
 Frame = +3

Query: 87  PHQSNTADTLQPNPKPPLWHPRRPQGRAPGEPHALLSKQPKL---------TPYIYLRSR 239
           PHQ + A+TL  +PKP    P  P   +PG+P  +  +QP++         TP I +   
Sbjct: 563 PHQDDVAETLTVDPKPGT-TPEEPHTESPGDPE-VQQRQPEVQESSEPIEPTPRITMVKL 620

Query: 240 HFDVQTVTTHISCP 281
             + Q ++   +CP
Sbjct: 621 QAEQQRISFPANCP 634

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>EXTN_MAIZE (P14918) Extensin precursor (Proline-rich glycoprotein)|
          Length = 267

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 28/86 (32%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
 Frame = +3

Query: 81  NNPHQSNTADTLQPNPKPPLWHPRRPQGRAPGEPHALLSKQPKLTPYIYLRSRH--FDVQ 254
           N+   S T  T  P+PKPP   P  P      +P A     PK TP  Y  S        
Sbjct: 10  NSRRYSLTPPTYTPSPKPPTPKPTPPTYTPSPKPPASKPPTPKPTPPTYTPSPKPPTPKP 69

Query: 255 TVTTHISCPAV*ATEADTLHLSPKPS 332
           T  T+   P   AT+  T    PKP+
Sbjct: 70  TPPTYTPSPKPPATKPPT----PKPT 91



 Score = 31.6 bits (70), Expect = 0.52
 Identities = 19/53 (35%), Positives = 21/53 (39%)
 Frame = +3

Query: 78  TNNPHQSNTADTLQPNPKPPLWHPRRPQGRAPGEPHALLSKQPKLTPYIYLRS 236
           T  P    T  T  P+PKPP   P  P      +P A     PK TP  Y  S
Sbjct: 83  TKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPTYTPS 135



 Score = 31.2 bits (69), Expect = 0.67
 Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
 Frame = +3

Query: 87  PHQSNTADTLQPNPKPPLWHPRRPQGRAPGEPHALLSKQPKLTPYIYLRSRH--FDVQTV 260
           P    T  T  P+PKPP   P  P      +P A     PK TP  Y  S        T 
Sbjct: 49  PTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPTYTPSPKPPTPKPTP 108

Query: 261 TTHISCPAV*ATEADTLHLSPKPS 332
            T+   P   AT+  T    PKP+
Sbjct: 109 PTYTPSPKPPATKPPT----PKPT 128



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/47 (36%), Positives = 19/47 (40%)
 Frame = +3

Query: 87  PHQSNTADTLQPNPKPPLWHPRRPQGRAPGEPHALLSKQPKLTPYIY 227
           P    T  T  P+PKPP   P  P      +P A     PK TP  Y
Sbjct: 190 PTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATKPPTPKPTPPTY 236



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 23/82 (28%), Positives = 31/82 (37%)
 Frame = +3

Query: 87  PHQSNTADTLQPNPKPPLWHPRRPQGRAPGEPHALLSKQPKLTPYIYLRSRHFDVQTVTT 266
           P    T  T  P+PKPP   P  P+   P    +     PK TP  Y  S     +  T 
Sbjct: 102 PTPKPTPPTYTPSPKPPATKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPS----PKPPTP 157

Query: 267 HISCPAV*ATEADTLHLSPKPS 332
             + P    +     H +PKP+
Sbjct: 158 KPTPPTYTPSPKPPTHPTPKPT 179

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>AMELX_HUMAN (Q99217) Amelogenin, X isoform precursor|
          Length = 191

 Score = 28.9 bits (63), Expect(2) = 0.50
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 117 QPNPKPPLWHPRRPQGRAPGEPHALLSKQPKLTP 218
           QPN  PP   P +PQ   P +PH  +  QP + P
Sbjct: 116 QPNLPPPAQQPYQPQPVQP-QPHQPMQPQPPVHP 148



 Score = 21.6 bits (44), Expect(2) = 0.50
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 47  PFQHAQLPTRHQQP 88
           P QH+  P +H QP
Sbjct: 104 PGQHSMTPIQHHQP 117

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>TWIST_DROVI (Q9TX44) Protein twist|
          Length = 519

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = +2

Query: 32  KHEQNPFQHAQLPTRHQQPTPIQYR*HPTTKPKAAALASTQXXXXXXXXXTCPAVQATEA 211
           + +Q   QH Q   +HQQ    QY   P+  P AA  A+             P+ +    
Sbjct: 54  QQQQQQQQHQQQQQQHQQQQQQQYAPLPSLAPNAADYAAYGITELEDTDYNIPSNEVLST 113

Query: 212 DTLHLSPKSSLRRTDSDH 265
            + H S +SSL   ++ H
Sbjct: 114 SSNH-SAQSSLELNNNQH 130

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>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)|
          Length = 283

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
 Frame = +3

Query: 78  TNNPHQSNTADTLQPNPKPPLWHPRRPQGRAPG-EPHALLSKQPKLTPYIYLRSRHFDVQ 254
           T +P    T     P PKPP   P  P    P  +P       PK TP +Y  +    V 
Sbjct: 118 TPSPKPPATKPPTYPTPKPPATKPPTPPVYTPSPKPPVTKPPTPKPTPPVYTPNPKPPVT 177

Query: 255 TVTTHISCP 281
              TH   P
Sbjct: 178 KPPTHTPSP 186

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>MAGD1_HUMAN (Q9Y5V3) Melanoma-associated antigen D1 (MAGE-D1 antigen)|
           (Neurotrophin receptor-interacting MAGE homolog) (MAGE
           tumor antigen CCF)
          Length = 778

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 138 LWHPRRPQGRAPGEPHALLSKQPKLTPYIYLRSRHFDVQTV 260
           LW   R  G  PG  H LL    KL  Y +++ ++ D + V
Sbjct: 582 LWEALRKMGLRPGVRHPLLGDLRKLLTYEFVKQKYLDYRRV 622

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>POLG_EC30B (Q9WN78) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
           protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
           VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
           P2A); Core protein P2B; Core protein P2C; Core protein
           P3A; Genome
          Length = 2193

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 171 PGEPHALLSKQPKLTPYIYLRSRHFDVQTVT 263
           P    A + + P+L PY+Y ++ +FDVQ VT
Sbjct: 810 PKHVKAWVPRAPRLCPYLYAKNVNFDVQGVT 840

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>MAGD1_PIG (Q6ITT4) Melanoma-associated antigen D1 (MAGE-D1 antigen)|
          Length = 784

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 138 LWHPRRPQGRAPGEPHALLSKQPKLTPYIYLRSRHFDVQTV 260
           LW   R  G  PG  H LL    KL  Y +++ ++ D + V
Sbjct: 588 LWEALRKMGLRPGVRHPLLGDLRKLLTYEFVKQKYLDYRRV 628

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>MAGD1_RAT (Q9ES73) Melanoma-associated antigen D1 (MAGE-D1 antigen)|
           (Neurotrophin receptor-interacting MAGE homolog)
           (Sertoli cell necdin-related gene 1) (SNERG-1)
          Length = 775

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 138 LWHPRRPQGRAPGEPHALLSKQPKLTPYIYLRSRHFDVQTV 260
           LW   R  G  PG  H LL    KL  Y +++ ++ D + V
Sbjct: 579 LWEALRKMGLRPGVRHPLLGDLRKLLTYEFVKQKYLDYRRV 619

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>MAGD1_MOUSE (Q9QYH6) Melanoma-associated antigen D1 (MAGE-D1 antigen)|
           (Neurotrophin receptor-interacting MAGE homolog)
           (Dlxin-1)
          Length = 775

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 138 LWHPRRPQGRAPGEPHALLSKQPKLTPYIYLRSRHFDVQTV 260
           LW   R  G  PG  H LL    KL  Y +++ ++ D + V
Sbjct: 579 LWEALRKMGLRPGVRHPLLGDLRKLLTYEFVKQKYLDYRRV 619

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>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1003

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +3

Query: 108 DTLQPNPKPP----LWHPRRPQGRAPGEPHALLSKQPKLTP 218
           DT  P P PP    L+ P R  G A   P A     P+L+P
Sbjct: 240 DTAVPRPTPPADKCLYTPERAAGPATSPPRAQAFSDPRLSP 280

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>TALA_POVMC (P12905) Large T antigen|
          Length = 777

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
 Frame = +3

Query: 114 LQPNPKPPLWHPRRPQGR----APGEPHALLSKQPKLTPYIYLRSR 239
           L PNP PP   P  P GR       EP   +S  P  TP    R R
Sbjct: 145 LSPNPSPPTDTPAHPAGRRRNPCVAEPDDSISPDPPRTPVSRKRPR 190

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>BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dependent|
           helicase brm) (Protein brahma)
          Length = 1638

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +3

Query: 93  QSNTADTLQPNPKPPLWHPRRPQGRAPGEPHALLSKQPKLTP 218
           Q+  A   QP P PP+  P  P G  PG  HA    QP + P
Sbjct: 204 QALQAAQQQPPPGPPIGPPGAPGGPPPGSQHA---GQPPVPP 242

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>SOX9_PIG (O18896) Transcription factor SOX-9|
          Length = 509

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 120 PNPKPPLWHPRRPQGRAPGEPHALLSKQPKLTP 218
           P P PP   P  PQ  AP +P A L +QP+  P
Sbjct: 344 PPPHPPQQPPPVPQ--APAQPQAALPQQPQAPP 374

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>TFE3_MOUSE (Q64092) Transcription factor E3 (Fragment)|
          Length = 446

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +3

Query: 60  LSSQHDTNNPHQSNTADTLQPNPKPPLWHPRRPQGRAPGEPHALLS 197
           L+SQ  T  P  S+     QP P P   H   P G AP  P ALL+
Sbjct: 84  LASQALTPPPGPSSA----QPLPAPETAHATGPTGSAPNSPMALLT 125

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>UL79_HCMVA (P16752) Protein UL79|
          Length = 295

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +3

Query: 105 ADTLQPNPKPPLWHPRRPQGRAPGEPHALLSKQPK--LTPYIYLRSRHFDVQTVTTHI 272
           A TL  +P  P  HP++ Q   PG PH  LS      L+P   L +R   + T+   +
Sbjct: 240 AGTLSRHPHRP--HPQQQQHHHPGPPHPPLSHPASSCLSPEAVLAARALHMPTLANDV 295

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>MEF2A_MOUSE (Q60929) Myocyte-specific enhancer factor 2A|
          Length = 498

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 69  QHDTNNPHQSNTADTLQPNPKPPLWHPRRPQGRAP 173
           QH  ++P Q       QP P+PP   PR+  GR+P
Sbjct: 418 QHHHHHPQQ-------QPPPQPPQPQPRQEMGRSP 445

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>MIG15_CAEEL (Q23356) Serine/threonine-protein kinase mig-15 (EC 2.7.11.1)|
           (Abnormal cell migration protein 15)
          Length = 1096

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +3

Query: 30  RNTNKIRFNTLSSQHDTNNPHQSNTADTLQPNPKPPLWHPRRPQGRAPGEPH 185
           R +++++   +SS+   + P  S  +      P+P   H R PQ   P  PH
Sbjct: 401 RESSEVKLRAVSSRGAADGPRHSPAS-----RPRPVSHHQRSPQQSHPAAPH 447

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>SIN3A_HUMAN (Q96ST3) Paired amphipathic helix protein Sin3a (Transcriptional|
           corepressor Sin3a) (Histone deacetylase complex subunit
           Sin3a)
          Length = 1273

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
 Frame = +3

Query: 114 LQPNPKPPLWHPRRPQGR--------APGEPHALLSKQPKL 212
           +QP P+PP  HP +P  +        AP  P A +SK  +L
Sbjct: 216 IQPQPQPPPQHPSQPSAQSAPAPAQPAPQPPPAKVSKPSQL 256

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>VGLL_PRVIF (P52511) Glycoprotein L precursor|
          Length = 156

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
 Frame = +3

Query: 84  NPHQSNTADTLQPNPKPPLWHPRRPQGRAPGEPHALLSKQP----KLTPYI 224
           NP   +        P PP  HPRR +     E H LL  +P    +  PYI
Sbjct: 25  NPRGLDAIFEAPVTPAPPTRHPRREELEWDDEDHPLLDLEPPVGSRCHPYI 75

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>PAK3_RAT (Q62829) Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1)|
           (p21-activated kinase 3) (PAK-3) (Beta-PAK) (p65-PAK)
          Length = 544

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
 Frame = +3

Query: 66  SQHDTNNPHQSNTADTLQPNPKPPLWH---PRRPQGRAPGEPHALLSKQPKLTPYIYLRS 236
           S H     HQSNT    +P   PP+         +     EP  +++ +P+ T  IY RS
Sbjct: 146 SAHGYIAAHQSNTKTASEPPLAPPVSEEEDEEEEEEEDDNEPPPVIAPRPEHTKSIYTRS 205

Query: 237 RHFDVQTVTTHISCPAV*ATEA 302
                  V   I+ PA    EA
Sbjct: 206 -------VVESIASPAAPNKEA 220

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>BRWD1_MOUSE (Q921C3) Bromodomain and WD-repeat domain-containing protein 1|
            (WD-repeat protein 9)
          Length = 2304

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/62 (25%), Positives = 24/62 (38%)
 Frame = +2

Query: 113  PTTKPKAAALASTQXXXXXXXXXTCPAVQATEADTLHLSPKSSLRRTDSDHTHLLPCCLS 292
            P T PKA+ L S           T    +        +  K S+R+    HT + PC L+
Sbjct: 2138 PDTSPKASDLGSVTDSDVDCTDNTQTQRKKKRKGKARVLSKESVRKDREPHTKMRPCMLN 2197

Query: 293  NR 298
             +
Sbjct: 2198 EK 2199

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>P54_ENTFC (P13692) Protein P54 precursor|
          Length = 516

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = +3

Query: 24  INRNTNKIRFNTLSSQHDTNNPHQSNTADTLQPNPKPPLWHPRRPQGRAPGEPHALLSKQ 203
           +N NTN    N+ ++    NN + +       P P P       P G   G   A++++ 
Sbjct: 352 VNNNTNNSTNNSTNNSTTNNNNNNNTVTPAPTPTPTPAPAPAPNPSGSVNGA--AIVAEA 409

Query: 204 PKL--TPYIY 227
            K   TPY++
Sbjct: 410 YKYIGTPYVW 419

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>ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating|
           enzyme subunit 1)
          Length = 346

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +2

Query: 128 KAAALASTQXXXXXXXXXTCPAVQATEADTLHLSPKSSLRRTDSDH 265
           K A L S++          CP  +A E D      K++L+RT SD+
Sbjct: 195 KRAKLDSSETTMVKKKVVFCPVKEALEVDWSSEKAKAALKRTTSDY 240

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>PAK3_MOUSE (Q61036) Serine/threonine-protein kinase PAK 3 (EC 2.7.11.1)|
           (p21-activated kinase 3) (PAK-3) (Beta-PAK) (CDC42/RAC
           effector kinase PAK-B)
          Length = 559

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = +3

Query: 66  SQHDTNNPHQSNTADTLQPNPKPPLWH---PRRPQGRAPGEPHALLSKQPKLTPYIYLRS 236
           S H     HQSNT    +P   PP+         +     EP  +++ +P+ T  IY RS
Sbjct: 161 SAHGYIAAHQSNTKTASEPPLAPPVSEEEDEEEEEEEDDNEPPPVIAPRPEHTKSIYTRS 220

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>VE4_HPV51 (P26548) Probable protein E4|
          Length = 87

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 117 QPNPKPPLWHPRRPQGRAPGEPHALLSKQPKLTPY 221
           +P P PP W P++P+  +  +   LLS  P  +P+
Sbjct: 24  RPIPLPPAWAPKKPRHNSENDSD-LLSPTPPQSPH 57

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>MEF2A_HUMAN (Q02078) Myocyte-specific enhancer factor 2A (Serum response|
           factor-like protein 1)
          Length = 507

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 11/61 (18%)
 Frame = +3

Query: 24  INRNTN-KIRFNTLSSQHDTNNP----------HQSNTADTLQPNPKPPLWHPRRPQGRA 170
           IN N N  I+   +S   D   P           Q       QP P+PP   PR+  GR+
Sbjct: 394 INTNQNISIKSEPISPPRDRMTPSGFQQQQQQQQQQQPPPPPQPQPQPPQPQPRQEMGRS 453

Query: 171 P 173
           P
Sbjct: 454 P 454

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>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1185

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +3

Query: 27  NRNTNKIRFNTLSSQHDTNNPHQSNTADTLQPNPKPPLWHPR-RPQGRAPGEPHALLSKQ 203
           NR+T+   ++  S ++D+++    +     +P   PPL+ P  +P    P +P A     
Sbjct: 128 NRSTSPSIYSPGSVENDSDSSSGLSQGPA-RPYHPPPLFPPSPQPPDSTPRQPEASFEPH 186

Query: 204 PKLTPYIY 227
           P +TP  Y
Sbjct: 187 PSVTPTGY 194

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>GHRHR_HUMAN (Q02643) Growth hormone-releasing hormone receptor precursor (GHRH|
           receptor) (GRF receptor) (GRFR)
          Length = 423

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -1

Query: 183 VAHLARGLGACVDARAAALGLVVGCQRYWIGVGCWCRVGS 64
           +  L     AC+ A        +GC   W G+ CW   GS
Sbjct: 31  ITQLREDESACLQAAEEMPNTTLGCPATWDGLLCWPTAGS 70

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>TRI66_HUMAN (O15016) Tripartite motif protein 66|
          Length = 1214

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +3

Query: 120 PNPKPPLWHPRRPQGRAPGEPHALLSKQPKLTPYIYLRS 236
           P P PPL HP  P    P +PH      P L P  +L S
Sbjct: 456 PPPPPPLPHPPPPLPPPPQQPH------PPLPPSQHLAS 488

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>TFE3_HUMAN (P19532) Transcription factor E3|
          Length = 743

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +3

Query: 117 QPNPKPPLWHPRRPQGRAPGEPHALLS 197
           QP P P   H   P G AP  P ALL+
Sbjct: 226 QPLPAPEAAHTTGPTGSAPNSPMALLT 252

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>SPTA3_MOUSE (Q9D9T6) Spermatogenesis-associated protein 3 (Testis spermatocyte|
           apoptosis-related protein 1) (Testis and spermatogenesis
           cell-related protein 1) (mTSARG1)
          Length = 193

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
 Frame = +3

Query: 75  DTNNPHQSNTADTLQ---PNPKPPLWHPRRPQGRAPGEPHALLSKQPKLTPYIYLRSR 239
           ++  PHQ N     Q   P P PP   P       P EP  +L  +    P  Y+  R
Sbjct: 53  ESTTPHQVNPEPKPQQHTPQPLPPPEKPASSPFLVPMEPKPILPSRKAAVPLTYVAPR 110

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>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1186

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +3

Query: 27  NRNTNKIRFNTLSSQHDTNNPHQSNTADTLQPNPKPPLWHPR-RPQGRAPGEPHALLSKQ 203
           NR+T+   ++  S ++D+++    +     +P   PPL+ P  +P    P +P A     
Sbjct: 127 NRSTSPSIYSPGSVENDSDSSSGLSQGPA-RPYHPPPLFPPSPQPPDSTPRQPEASFEPH 185

Query: 204 PKLTPYIY 227
           P +TP  Y
Sbjct: 186 PSVTPTGY 193

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>GPR88_HUMAN (Q9GZN0) Probable G-protein coupled receptor 88 (Striatum-specific|
           G-protein coupled receptor)
          Length = 384

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +3

Query: 87  PHQSNTADTLQPNPKPPLWHPRRPQGRAPG 176
           P     A   Q  P PP  HPRR Q R  G
Sbjct: 254 PGPGGAAHPAQAQPLPPALHPRRAQRRLSG 283

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>SIN3A_MOUSE (Q60520) Paired amphipathic helix protein Sin3a (Transcriptional|
           corepressor Sin3a) (Histone deacetylase complex subunit
           Sin3a)
          Length = 1282

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 21/70 (30%), Positives = 27/70 (38%)
 Frame = +2

Query: 29  QKHEQNPFQHAQLPTRHQQPTPIQYR*HPTTKPKAAALASTQXXXXXXXXXTCPAVQATE 208
           Q   Q P QH   P+    PTP Q    P  +P AA ++              PA Q T 
Sbjct: 217 QPQPQPPPQHPSQPSSQSAPTPAQ----PAPQPTAAKVSKPSQLQAHT-----PASQQTP 267

Query: 209 ADTLHLSPKS 238
               + SP+S
Sbjct: 268 PLPPYASPRS 277

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>GLI1_MOUSE (P47806) Zinc finger protein GLI1 (Glioma-associated oncogene|
           homolog)
          Length = 1111

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +3

Query: 84  NPHQSNTADTLQP--NPKPPLWHPRRPQ-GRAPGEPHALLSKQPKL 212
           N H S  +   QP  +  P L  P+ PQ G  P  PH  LS +P+L
Sbjct: 835 NAHPSEGSPGPQPLFSHHPQLPQPQYPQSGPYPQPPHGYLSTEPRL 880

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>WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)|
          Length = 641

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
 Frame = +3

Query: 54  NTLSSQHDTNNPHQSNTADTLQPNPKP---PLWHPRRPQGRAPGEPHALLSKQPKLTP 218
           +T ++      P QS  A  +Q  P P   PL  P  P  R PG P  L    P   P
Sbjct: 382 STAAASSQQQAPPQSAPASQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAP 439

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>PDE4D_RAT (P14270) cAMP-specific 3',5'-cyclic phosphodiesterase 4D (EC|
           3.1.4.17) (DPDE3)
          Length = 803

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = +3

Query: 48  RFNTLSSQHDTNNPHQSNTADTLQPNPKPPLWHPRRPQGRAPG 176
           +F  L   H    P   +    LQP P PPL  P  P G   G
Sbjct: 47  QFRLLHPHHHLPPPPPPSPQPQLQPPPPPPLPPPPPPPGATRG 89

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>ALX4_HUMAN (Q9H161) Homeobox protein aristaless-like 4|
          Length = 411

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 111 TLQPNPKP-PLWHPRRPQGRAPGEPHALLSKQPKLTP 218
           T QP P P P    ++PQ + P +PH  L +    TP
Sbjct: 96  TPQPQPSPQPQPQQQQPQPQPPAQPHLYLQRGACKTP 132

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>GRB7_HUMAN (Q14451) Growth factor receptor-bound protein 7 (GRB7 adapter|
           protein) (Epidermal growth factor receptor GRB-7) (B47)
          Length = 532

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +3

Query: 75  DTNNPHQSNTADTLQPNPKPPLWHPRRPQGRAPGEPHALLSKQPKLTP 218
           D + PH S++ + L P P  P   PR P    P E   +   QP L P
Sbjct: 4   DLSPPHLSSSPEDLWPAPGTPPGTPRPPDTPLPEE---VKRSQPLLIP 48

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>CCG8_NEUCR (Q01306) Clock-controlled protein 8|
          Length = 661

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 18/70 (25%), Positives = 30/70 (42%)
 Frame = +2

Query: 29  QKHEQNPFQHAQLPTRHQQPTPIQYR*HPTTKPKAAALASTQXXXXXXXXXTCPAVQATE 208
           Q+H+ +   H Q   +H  P P Q +   T+ P  +AL +             PA+ A+ 
Sbjct: 43  QQHQHH--HHQQQQQQHPVPVPKQEQADNTSAPVLSALPAYPTLPPIWDSTHSPALSASS 100

Query: 209 ADTLHLSPKS 238
           + T+  S  S
Sbjct: 101 SSTMQASASS 110

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>TCF20_MOUSE (Q9EPQ8) Transcription factor 20 (Stromelysin 1 PDGF-responsive|
            element-binding protein) (SPRE-binding protein) (Nuclear
            factor SPBP)
          Length = 1983

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 117  QPNPKPPLWHPRRPQGRAPGEPHALLSKQ 203
            Q  P PP   P+ P+G A GEP     +Q
Sbjct: 1582 QQQPPPPPQPPQMPEGSADGEPKPKKQRQ 1610

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>WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)|
          Length = 640

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 13/48 (27%)
 Frame = +3

Query: 114 LQPNPKPPLWHPRRPQG-------------RAPGEPHALLSKQPKLTP 218
           L P P PP+  P  P G             R PG P AL    P+L P
Sbjct: 378 LGPPPAPPMRPPGPPSGPPPGPPPGAPPFLRPPGLPSALRGPMPRLLP 425

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>FETUA_PANTR (Q9N2D0) Alpha-2-HS-glycoprotein precursor (Fetuin-A) [Contains:|
           Alpha-2-HS-glycoprotein chain A; Alpha-2-HS-glycoprotein
           chain B]
          Length = 367

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +3

Query: 60  LSSQHDTNNPHQSNTADTLQPN--PKPPLWHPRRPQGRAPGEPHALLSKQP 206
           ++SQ      +++     + P+  P PPL  P  P   +P + H LL+  P
Sbjct: 255 VTSQPQPEGANETVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAPP 305

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>FETUA_HUMAN (P02765) Alpha-2-HS-glycoprotein precursor (Fetuin-A)|
           (Alpha-2-Z-globulin) (Ba-alpha-2-glycoprotein)
           [Contains: Alpha-2-HS-glycoprotein chain A;
           Alpha-2-HS-glycoprotein chain B]
          Length = 367

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +3

Query: 60  LSSQHDTNNPHQSNTADTLQPN--PKPPLWHPRRPQGRAPGEPHALLSKQP 206
           ++SQ      +++     + P+  P PPL  P  P   +P + H LL+  P
Sbjct: 255 VTSQPQPEGANEAVPTPVVDPDAPPSPPLGAPGLPPAGSPPDSHVLLAAPP 305

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>RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-associated protein 1|
            (PRAX-1) (Peripheral benzodiazepine receptor-interacting
            protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1)
          Length = 1857

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +3

Query: 81   NNPHQSNTADTLQPNPKPPLWHPRRPQGRAPGEPHALLSKQPKLTPYIYLRSRH 242
            N P   +TA T  P PKP     ++ +   P +P       PKL P   L++ H
Sbjct: 1719 NGPFVYSTAHTTGPPPKPR--RSKKAESEGPAQP---CPGPPKLVPSADLKAPH 1767

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>CCNK_HUMAN (O75909) Cyclin-K|
          Length = 357

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +3

Query: 81  NNPHQSNTADTLQPNPKPPLWHPRRP-QGRAPGEPHALLSKQP 206
           + PHQ     +LQP P+ P     +P Q   P +P     +QP
Sbjct: 268 HTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQP 310

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>SP7_HUMAN (Q8TDD2) Transcription factor Sp7 (Zinc finger protein osterix)|
          Length = 431

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +3

Query: 24  INRNTNKIRFNTL-SSQHDTNNPHQSNTADTL-QPNPKPPLWHPRR-PQGRAPGEPHALL 194
           +  +T + +F  L  S+  T + H S    T  +P P PP   P+   +GR+ GE  A  
Sbjct: 345 VRTHTREKKFTCLLCSKRFTRSDHLSKHQRTHGEPGPGPPPSGPKELGEGRSTGEEEASQ 404

Query: 195 SKQPKLTP 218
           + +P  +P
Sbjct: 405 TPRPSASP 412

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>FIBL_BOMMO (P21828) Fibroin light chain precursor (Fib-L) (L-fibroin)|
          Length = 262

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -1

Query: 231 GDRCRVSASVAWTAGHVAHLARGLGACVDARAAA 130
           GD    +++VA TAG +AHL+ G+    DA AAA
Sbjct: 73  GDYASQASAVAQTAGIIAHLSAGIPG--DACAAA 104

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>DYC1_CAEEL (Q8STF6) Dystrophin-like protein 1 (Dyb-1-binding and CAPON-related|
           protein)
          Length = 887

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
 Frame = +3

Query: 33  NTNKIRFNTLSSQHDTN--------NPHQSNTAD--TLQPN---PKPPLWHPRRPQGRAP 173
           N  + +FNTL SQ  +         NP QS+     T+ PN   P   L HPR    + P
Sbjct: 302 NIQQQQFNTLPSQMPSTQTLPSLSENPGQSHIPRMMTMPPNMPYPTATLPHPRTWAPQIP 361

Query: 174 GEPHALLSKQPKLTPY 221
             P+++ S +  +  Y
Sbjct: 362 SYPNSMQSLEQNVPMY 377

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>PDE1C_MOUSE (Q64338) Calcium/calmodulin-dependent 3',5'-cyclic nucleotide|
           phosphodiesterase 1C (EC 3.1.4.17) (Cam-PDE 1C)
          Length = 706

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 33  NTNKIRFNTLSSQHDTNNPHQSNTADTLQPNPKPPLWHPRRP 158
           N +K    T    H +  P  S+T+    P  KPPL H +RP
Sbjct: 621 NESKKTDGTKKRSHGSPAPSTSSTSRITLPVIKPPLRHFKRP 662

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>BAB2_DROME (Q9W0K4) Protein bric-a-brac 2|
          Length = 1067

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 29  QKHEQNPFQHAQLPTRHQQPTP 94
           Q+H Q    H Q P+ HQQ +P
Sbjct: 805 QQHHQQQAHHQQQPSHHQQQSP 826

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>PDE1C_RAT (Q63421) Calcium/calmodulin-dependent 3',5'-cyclic nucleotide|
           phosphodiesterase 1C (EC 3.1.4.17) (Cam-PDE 1C)
          Length = 768

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 33  NTNKIRFNTLSSQHDTNNPHQSNTADTLQPNPKPPLWHPRRP 158
           N +K    T    H +  P  S+T+    P  KPPL H +RP
Sbjct: 683 NESKKADGTKKRSHGSPAPSTSSTSRLTLPVIKPPLRHFKRP 724


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,807,641
Number of Sequences: 219361
Number of extensions: 1006434
Number of successful extensions: 4345
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 3897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4304
length of database: 80,573,946
effective HSP length: 86
effective length of database: 61,708,900
effective search space used: 1481013600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result