>gb|AC108131.2| Homo sapiens chromosome 16 clone RP11-337N9, complete sequence
          Length = 151941

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 176  tgagccacatgccctgctgtcc 197
            ||||||||||||||||||||||
Sbjct: 6789 tgagccacatgccctgctgtcc 6768

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 4        atagaaaagttgtttaattaat 25
                ||||||||||||||||||||||
Sbjct: 24990351 atagaaaagttgtttaattaat 24990372

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 4        atagaaaagttgtttaattaat 25
                ||||||||||||||||||||||
Sbjct: 24918557 atagaaaagttgtttaattaat 24918578

>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 146686

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 4      atagaaaagttgtttaattaat 25
              ||||||||||||||||||||||
Sbjct: 116816 atagaaaagttgtttaattaat 116795

>gb|AC131949.1| Homo sapiens BAC clone RP11-240J11 from 4, complete sequence
          Length = 65210

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 2     agatagaaaagttgtttaattaatt 26
             ||||||||||||||||||| |||||
Sbjct: 20281 agatagaaaagttgtttaaataatt 20305

>gb|AC156800.2| Mus musculus BAC clone RP23-366B23 from chromosome 9, complete sequence
          Length = 190619

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 207    aagctgacaccctacatctat 227
              |||||||||||||||||||||
Sbjct: 163827 aagctgacaccctacatctat 163807



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 298    aagctgacaccctacatctat 318
              |||||||||||||||||||||
Sbjct: 163827 aagctgacaccctacatctat 163807

>gb|AC165257.2| Mus musculus BAC clone RP23-162D3 from chromosome 9, complete sequence
          Length = 181162

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   aagctgacaccctacatctat 227
             |||||||||||||||||||||
Sbjct: 44198 aagctgacaccctacatctat 44178



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 298   aagctgacaccctacatctat 318
             |||||||||||||||||||||
Sbjct: 44198 aagctgacaccctacatctat 44178

>gb|AC115063.8| Mus musculus chromosome 1, clone RP24-400H18, complete sequence
          Length = 192133

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    taacagaaacacgaacaaaa 45
             ||||||||||||||||||||
Sbjct: 35035 taacagaaacacgaacaaaa 35016

>gb|AE006290.1| Lactococcus lactis subsp. lactis IL1403 section 52 of 218 of the
             complete genome
          Length = 11434

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aagatagaaaagttgtttaattaa 24
             |||||||||||||| |||||||||
Sbjct: 10457 aagatagaaaagttctttaattaa 10434

>gb|AC158765.4| Mus musculus chromosome 1, clone RP24-218I23, complete sequence
          Length = 130451

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    taacagaaacacgaacaaaa 45
             ||||||||||||||||||||
Sbjct: 54011 taacagaaacacgaacaaaa 53992

>gb|AC112717.5| Homo sapiens BAC clone RP11-481H16 from 4, complete sequence
          Length = 189406

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     tttaattaattaacagaaac 35
              ||||||||||||||||||||
Sbjct: 173348 tttaattaattaacagaaac 173367

>gb|AC093834.3| Homo sapiens BAC clone RP11-423L1 from 4, complete sequence
          Length = 177582

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     tttaattaattaacagaaac 35
              ||||||||||||||||||||
Sbjct: 167105 tttaattaattaacagaaac 167124

>gb|AC007394.4| Homo sapiens BAC clone RP11-489G12 from 2, complete sequence
          Length = 171468

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      aaaagttgtttaattaatta 27
              ||||||||||||||||||||
Sbjct: 132105 aaaagttgtttaattaatta 132086

>gb|AC117516.5| Homo sapiens 3 BAC RP11-845C18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 172997

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aaaagttgtttaattaatta 27
             ||||||||||||||||||||
Sbjct: 19381 aaaagttgtttaattaatta 19362

>dbj|AP004407.1| Cataetyx rubrirostris mitochondrial DNA, complete genome
          Length = 16495

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   acaaccaaacccaaagccgc 135
             ||||||||||||||||||||
Sbjct: 14185 acaaccaaacccaaagccgc 14204

>emb|AL611931.22| Mouse DNA sequence from clone RP23-460D14 on chromosome 4, complete
              sequence
          Length = 201635

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 300    gctgacaccctacatctatctccgaagc 327
              ||||||||||| ||||||||||| ||||
Sbjct: 147416 gctgacaccctgcatctatctcccaagc 147389


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,698,699
Number of Sequences: 3902068
Number of extensions: 2698699
Number of successful extensions: 58420
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58349
Number of HSP's gapped (non-prelim): 71
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)