ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl47e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC093859.3| Homo sapiens BAC clone RP11-538A7 from 2, complet... 42 0.30
2emb|CR293523.11| Zebrafish DNA sequence from clone DKEY-104J7 in... 42 0.30
3ref|XM_636231.1| Dictyostelium discoideum hypothetical protein (... 40 1.2
4gb|AC004227.1| Homo sapiens chromosome 5, P1 clone 356a8 (LBNL H... 40 1.2
5gb|AY625727.1| Vanmanenia pingchowensis cytochrome b (cytb) gene... 40 1.2
6gb|AC129561.13| Mus musculus chromosome 1, clone RP23-192P10, co... 40 1.2
7gb|DQ105219.1| Vanmanenia pingchowensis haplotype 2 cytochrome b... 40 1.2
8ref|XM_741196.1| Plasmodium chabaudi chabaudi sulfate transporte... 40 1.2
9gb|AC183612.3| Pan troglodytes BAC clone CH251-194C16 from chrom... 40 1.2
10gb|AY328883.1| Thalassoma septemfasciata cytochrome b (cytb) gen... 40 1.2
11emb|AL354773.8| Human DNA sequence from clone RP5-855L24 on chro... 40 1.2
12gb|AC164159.2| Mus musculus BAC clone RP23-339C17 from chromosom... 40 1.2
13gb|AC182753.1| Gasterosteus aculeatus clone VMRC28-42C03, comple... 40 1.2
14gb|AC013481.4|AC013481 Homo sapiens BAC clone CTD-3092G12 from 7... 40 1.2
15gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana... 40 1.2
16gb|AC007458.14| Homo sapiens 12 BAC RP11-444B24 (Roswell Park Ca... 40 1.2
17dbj|AB109005.1| Acheilognathus tabira (b) mitochondrial cytb gen... 40 1.2
18gb|AC151280.3| Mus musculus BAC clone RP24-79H13 from 17, comple... 40 1.2
19gb|AC007214.13|AC007214 Pan troglodytes 12cp12 BAC RPCI43-135M19... 40 1.2
20gb|AF245457.1| Cynolebias nioni cytochrome b gene, partial cds; ... 40 1.2
21gb|AF245015.1| Cynolebias vazferreirai cytochrome b gene, partia... 40 1.2
22gb|AF245005.1| Cynolebias cinereus cytochrome b gene, partial cd... 40 1.2
23gb|AC159318.4| Mus musculus BAC clone RP23-76M13 from chromosome... 38 4.6
24ref|XM_599349.2| PREDICTED: Bos taurus similar to ring finger pr... 38 4.6
25gb|AF286905.1| Homo sapiens enhancer of polycomb 1 (EPC1) mRNA, ... 38 4.6
26gb|AC133177.3| Mus musculus BAC clone RP24-116D7 from chromosome... 38 4.6
27gb|AC132910.8| Mus musculus chromosome 17, clone RP24-301I14, co... 38 4.6
28ref|XM_447747.1| Candida glabrata CBS138, CAGL0J00803g partial mRNA 38 4.6
29gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome... 38 4.6
30ref|XM_644450.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 38 4.6
31ref|XM_535156.2| PREDICTED: Canis familiaris similar to enhancer... 38 4.6
32ref|XM_854181.1| PREDICTED: Canis familiaris similar to enhancer... 38 4.6
33ref|XM_854139.1| PREDICTED: Canis familiaris similar to enhancer... 38 4.6
34ref|XM_844496.1| PREDICTED: Canis familiaris similar to enhancer... 38 4.6
35gb|AC101718.6| Mus musculus chromosome 18, clone RP23-292N8, com... 38 4.6
36emb|AL359922.10| Human DNA sequence from clone RP11-70L8 on chro... 38 4.6
37emb|AL359377.18| Human DNA sequence from clone RP11-96C4 on chro... 38 4.6
38gb|AY336799.1| Brassica napus APETALA3 gene, complete cds 38 4.6
39emb|AL158834.19| Human DNA sequence from clone RP11-166N17 on ch... 38 4.6
40emb|AL160255.14| Human DNA sequence from clone RP11-60N6 on chro... 38 4.6
41gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 38 4.6
42emb|CR380956.1| Candida glabrata strain CBS138 chromosome J comp... 38 4.6
43gb|AC156546.7| Mus musculus chromosome 18, clone RP23-131O22, co... 38 4.6
44gb|BC036529.1| Homo sapiens enhancer of polycomb homolog 1 (Dros... 38 4.6
45emb|BX901923.6| Zebrafish DNA sequence from clone CH211-285J16 i... 38 4.6
46emb|CR388063.9| Zebrafish DNA sequence from clone CH211-248P16 i... 38 4.6
47gb|AC090110.5| Homo sapiens 12 BAC RP11-495K13 (Roswell Park Can... 38 4.6
48emb|CR611292.1| full-length cDNA clone CS0DI072YH03 of Placenta ... 38 4.6
49emb|CR597801.1| full-length cDNA clone CS0CAP007YH01 of Thymus o... 38 4.6
50emb|BX936456.6| Zebrafish DNA sequence from clone DKEY-266J9 in ... 38 4.6
51gb|AC103693.2| Homo sapiens chromosome 18, clone CTD-2522C24, co... 38 4.6
52gb|AC114310.2| Homo sapiens chromosome 5 clone RP11-285K13, comp... 38 4.6
53gb|AC079385.18| Homo sapiens 12q BAC RP11-482D24 (Roswell Park C... 38 4.6
54ref|XM_692044.1| PREDICTED: Danio rerio similar to KIAA1201 prot... 38 4.6
55gb|AC160062.6| Mus musculus 6 BAC RP23-427I18 (Roswell Park Canc... 38 4.6
56gb|AC008758.7| Homo sapiens chromosome 19 clone CTD-3105H18, com... 38 4.6
57gb|AC000047.6| Combined sequence from cosmids c110 and c20 deriv... 38 4.6
58gb|AC025457.5|AC025457 Homo sapiens chromosome 5 clone CTD-2202K... 38 4.6
59emb|BX832953.1|CNS0A0IA Arabidopsis thaliana Full-length cDNA Co... 38 4.6
60gb|U67456.1|BOU67456 Brassica oleracea homeotic protein bobap3 (... 38 4.6
61gb|AY094355.1| Acinetobacter baumannii strain 19606 anthranilate... 38 4.6
62gb|AC132445.3| Mus musculus BAC clone RP23-173F23 from chromosom... 38 4.6
63emb|BX936320.11| Zebrafish DNA sequence from clone CH211-112L17 ... 38 4.6
64gb|AC101349.8| Mus musculus chromosome 6, clone RP23-111E12, com... 38 4.6
65gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosom... 38 4.6
66emb|AL953903.8| Zebrafish DNA sequence from clone CH211-249G19, ... 38 4.6
67emb|BX005233.10| Mouse DNA sequence from clone RP23-214I11 on ch... 38 4.6
68dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone... 38 4.6
69emb|AL807385.11| Mouse DNA sequence from clone RP23-143B14 on ch... 38 4.6
70dbj|AB060808.1| Homo sapiens gene for p16/CDKN2A, complete cds 38 4.6 
>gb|AC093859.3| Homo sapiens BAC clone RP11-538A7 from 2, complete sequence
          Length = 107842

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    ttcttctttcttcactgtttt 41
             |||||||||||||||||||||
Sbjct: 79232 ttcttctttcttcactgtttt 79212
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>emb|CR293523.11| Zebrafish DNA sequence from clone DKEY-104J7 in linkage group 7, complete
              sequence
          Length = 214581

 Score = 42.1 bits (21), Expect = 0.30
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 28     ttcttcactgttttaaatgataata 52
              ||||||||| |||||||||||||||
Sbjct: 174169 ttcttcacttttttaaatgataata 174193
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>ref|XM_636231.1| Dictyostelium discoideum hypothetical protein (DDB0206461), partial
           mRNA
          Length = 945

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 22  tcttctttcttcactgttttaaat 45
           |||||||| |||||||||||||||
Sbjct: 164 tcttctttattcactgttttaaat 141
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>gb|AC004227.1| Homo sapiens chromosome 5, P1 clone 356a8 (LBNL H32), complete
            sequence
          Length = 72941

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   gctatatcttcttctttctt 32
            ||||||||||||||||||||
Sbjct: 9345 gctatatcttcttctttctt 9364
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>gb|AY625727.1| Vanmanenia pingchowensis cytochrome b (cytb) gene, partial cds;
           mitochondrial
          Length = 1140

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  atttccttccacccttattt 102
           ||||||||||||||||||||
Sbjct: 652 atttccttccacccttattt 671
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>gb|AC129561.13| Mus musculus chromosome 1, clone RP23-192P10, complete sequence
          Length = 217279

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 27     tttcttcactgttttaaatgataa 50
              ||||||||||| ||||||||||||
Sbjct: 146264 tttcttcactgatttaaatgataa 146287
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>gb|DQ105219.1| Vanmanenia pingchowensis haplotype 2 cytochrome b (cytb) gene,
           partial cds; mitochondrial
          Length = 1140

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  atttccttccacccttattt 102
           ||||||||||||||||||||
Sbjct: 652 atttccttccacccttattt 671
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>ref|XM_741196.1| Plasmodium chabaudi chabaudi sulfate transporter (PC000144.02.0)
            partial mRNA
          Length = 2010

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   tttcttcactgttttaaatg 46
            ||||||||||||||||||||
Sbjct: 1318 tttcttcactgttttaaatg 1337
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>gb|AC183612.3| Pan troglodytes BAC clone CH251-194C16 from chromosome 12, complete
              sequence
          Length = 135756

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     ttctttcttcactgttttaa 43
              ||||||||||||||||||||
Sbjct: 133912 ttctttcttcactgttttaa 133893
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>gb|AY328883.1| Thalassoma septemfasciata cytochrome b (cytb) gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 560

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  atttccttccacccttattt 102
           ||||||||||||||||||||
Sbjct: 345 atttccttccacccttattt 364
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>emb|AL354773.8| Human DNA sequence from clone RP5-855L24 on chromosome 20 Contains part
             of the C20orf133 gene, complete sequence
          Length = 117609

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    tatcttcttctttcttcactgttt 40
             ||||||||| ||||||||||||||
Sbjct: 32302 tatcttcttttttcttcactgttt 32325
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>gb|AC164159.2| Mus musculus BAC clone RP23-339C17 from chromosome 17, complete sequence
          Length = 206481

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     cttcttctttcttcactgtt 39
              ||||||||||||||||||||
Sbjct: 195496 cttcttctttcttcactgtt 195515
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>gb|AC182753.1| Gasterosteus aculeatus clone VMRC28-42C03, complete sequence
          Length = 133894

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     tcttcttctttcttcactgt 38
              ||||||||||||||||||||
Sbjct: 102907 tcttcttctttcttcactgt 102888
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>gb|AC013481.4|AC013481 Homo sapiens BAC clone CTD-3092G12 from 7p11.2-p21, complete sequence
          Length = 30500

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    tcttctttcttcactgtttt 41
             ||||||||||||||||||||
Sbjct: 15425 tcttctttcttcactgtttt 15444
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>gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana BAC T23E18 from chromosome I,
             complete sequence
          Length = 97554

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    tcttctttcttcactgtttt 41
             ||||||||||||||||||||
Sbjct: 24479 tcttctttcttcactgtttt 24498
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>gb|AC007458.14| Homo sapiens 12 BAC RP11-444B24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 190961

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    ttctttcttcactgttttaa 43
             ||||||||||||||||||||
Sbjct: 49859 ttctttcttcactgttttaa 49840
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>dbj|AB109005.1| Acheilognathus tabira (b) mitochondrial cytb gene for cytochrome b,
           partial cds, country: Japan:Fukuoka, Futatsukawa Creek
          Length = 1018

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  atttccttccacccttattt 102
           ||||||||||||||||||||
Sbjct: 626 atttccttccacccttattt 645
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>gb|AC151280.3| Mus musculus BAC clone RP24-79H13 from 17, complete sequence
          Length = 214433

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    cttcttctttcttcactgtt 39
             ||||||||||||||||||||
Sbjct: 11149 cttcttctttcttcactgtt 11168
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>gb|AC007214.13|AC007214 Pan troglodytes 12cp12 BAC RPCI43-135M19 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 154685

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    ttctttcttcactgttttaa 43
             ||||||||||||||||||||
Sbjct: 20790 ttctttcttcactgttttaa 20809
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>gb|AF245457.1| Cynolebias nioni cytochrome b gene, partial cds; mitochondrial gene
           for mitochondrial product
          Length = 781

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  atttccttccacccttattt 102
           ||||||||||||||||||||
Sbjct: 643 atttccttccacccttattt 662
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>gb|AF245015.1| Cynolebias vazferreirai cytochrome b gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 777

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  atttccttccacccttattt 102
           ||||||||||||||||||||
Sbjct: 655 atttccttccacccttattt 674
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>gb|AF245005.1| Cynolebias cinereus cytochrome b gene, partial cds; mitochondrial
           gene for mitochondrial product
          Length = 786

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  atttccttccacccttattt 102
           ||||||||||||||||||||
Sbjct: 655 atttccttccacccttattt 674
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>gb|AC159318.4| Mus musculus BAC clone RP23-76M13 from chromosome 12, complete sequence
          Length = 269200

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    ctatatcttcttctttctt 32
             |||||||||||||||||||
Sbjct: 15224 ctatatcttcttctttctt 15242
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>ref|XM_599349.2| PREDICTED: Bos taurus similar to ring finger protein 12 (LOC521092),
            mRNA
          Length = 2013

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 23   cttctttcttcactgtttt 41
            |||||||||||||||||||
Sbjct: 1520 cttctttcttcactgtttt 1502
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>gb|AF286905.1| Homo sapiens enhancer of polycomb 1 (EPC1) mRNA, complete cds
          Length = 3739

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 76   tagtcccatttccttccac 94
            |||||||||||||||||||
Sbjct: 3226 tagtcccatttccttccac 3244
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>gb|AC133177.3| Mus musculus BAC clone RP24-116D7 from chromosome 18, complete sequence
          Length = 185838

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 26     ctttcttcactgttttaaa 44
              |||||||||||||||||||
Sbjct: 152914 ctttcttcactgttttaaa 152932
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>gb|AC132910.8| Mus musculus chromosome 17, clone RP24-301I14, complete sequence
          Length = 209975

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 27     tttcttcactgttttaaat 45
              |||||||||||||||||||
Sbjct: 128341 tttcttcactgttttaaat 128323
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>ref|XM_447747.1| Candida glabrata CBS138, CAGL0J00803g partial mRNA
          Length = 3945

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 14   ctatatcttcttctttctt 32
            |||||||||||||||||||
Sbjct: 1306 ctatatcttcttctttctt 1288
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>gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome 5, complete sequence
          Length = 186986

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 29    tcttcactgttttaaatga 47
             |||||||||||||||||||
Sbjct: 38806 tcttcactgttttaaatga 38824
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>ref|XM_644450.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (291.t00006)
           partial mRNA
          Length = 573

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 16  atatcttcttctttcttca 34
           |||||||||||||||||||
Sbjct: 416 atatcttcttctttcttca 398
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>ref|XM_535156.2| PREDICTED: Canis familiaris similar to enhancer of polycomb homolog 1
            isoform 2, transcript variant 1 (LOC477970), mRNA
          Length = 4140

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 76   tagtcccatttccttccac 94
            |||||||||||||||||||
Sbjct: 3636 tagtcccatttccttccac 3654
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>ref|XM_854181.1| PREDICTED: Canis familiaris similar to enhancer of polycomb homolog 1
            isoform 2, transcript variant 6 (LOC477970), mRNA
          Length = 3723

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 76   tagtcccatttccttccac 94
            |||||||||||||||||||
Sbjct: 3219 tagtcccatttccttccac 3237
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>ref|XM_854139.1| PREDICTED: Canis familiaris similar to enhancer of polycomb homolog 1
            isoform 2, transcript variant 5 (LOC477970), mRNA
          Length = 4079

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 76   tagtcccatttccttccac 94
            |||||||||||||||||||
Sbjct: 3549 tagtcccatttccttccac 3567
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>ref|XM_844496.1| PREDICTED: Canis familiaris similar to enhancer of polycomb homolog 1
            isoform 2, transcript variant 3 (LOC477970), mRNA
          Length = 4053

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 76   tagtcccatttccttccac 94
            |||||||||||||||||||
Sbjct: 3549 tagtcccatttccttccac 3567
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>gb|AC101718.6| Mus musculus chromosome 18, clone RP23-292N8, complete sequence
          Length = 175366

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 72    atcctagtcccatttcctt 90
             |||||||||||||||||||
Sbjct: 71642 atcctagtcccatttcctt 71660
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>emb|AL359922.10| Human DNA sequence from clone RP11-70L8 on chromosome 9 Contains a
              pseudogene similar to part of beta tubulin, the MTAP gene
              for methylthioadenosine phosphorylase (MSAP), a novel gene
              and a CpG island, complete sequence
          Length = 168656

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 27     tttcttcactgttttaaat 45
              |||||||||||||||||||
Sbjct: 159230 tttcttcactgttttaaat 159212
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>emb|AL359377.18| Human DNA sequence from clone RP11-96C4 on chromosome 10 Contains part
             of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin
             G), complete sequence
          Length = 172177

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 23    cttctttcttcactgttttaaat 45
             ||||||||||||||| |||||||
Sbjct: 74048 cttctttcttcactgatttaaat 74070
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>gb|AY336799.1| Brassica napus APETALA3 gene, complete cds
          Length = 1915

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 18   atcttcttctttcttcact 36
            |||||||||||||||||||
Sbjct: 1085 atcttcttctttcttcact 1103
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>emb|AL158834.19| Human DNA sequence from clone RP11-166N17 on chromosome 10 Contains a
            novel gene and the 3' end of the EPC1 gene for enhancer
            of polycomb homolog 1, (Drosophila), complete sequence
          Length = 29977

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 76   tagtcccatttccttccac 94
            |||||||||||||||||||
Sbjct: 2451 tagtcccatttccttccac 2433
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>emb|AL160255.14| Human DNA sequence from clone RP11-60N6 on chromosome 13 Contains the
             5' end of a novel gene (KIAA0774), complete sequence
          Length = 172923

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 22    tcttctttcttcactgttttaaa 44
             ||||||||||||| |||||||||
Sbjct: 78407 tcttctttcttcagtgttttaaa 78429
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>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 64     tgatgataatcctagtcccattt 86
              |||||||||||||| ||||||||
Sbjct: 604512 tgatgataatcctaatcccattt 604534
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>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    ctatatcttcttctttctt 32
             |||||||||||||||||||
Sbjct: 86122 ctatatcttcttctttctt 86140
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>gb|AC156546.7| Mus musculus chromosome 18, clone RP23-131O22, complete sequence
          Length = 209678

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 72     atcctagtcccatttcctt 90
              |||||||||||||||||||
Sbjct: 202231 atcctagtcccatttcctt 202249
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>gb|BC036529.1| Homo sapiens enhancer of polycomb homolog 1 (Drosophila), mRNA (cDNA
            clone MGC:33656 IMAGE:4828057), complete cds
          Length = 4063

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 76   tagtcccatttccttccac 94
            |||||||||||||||||||
Sbjct: 3558 tagtcccatttccttccac 3576
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>emb|BX901923.6| Zebrafish DNA sequence from clone CH211-285J16 in linkage group 15,
              complete sequence
          Length = 151595

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     tgttttaaatgataatact 54
              |||||||||||||||||||
Sbjct: 106768 tgttttaaatgataatact 106786
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>emb|CR388063.9| Zebrafish DNA sequence from clone CH211-248P16 in linkage group 18,
              complete sequence
          Length = 142119

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 24     ttctttcttcactgtttta 42
              |||||||||||||||||||
Sbjct: 127959 ttctttcttcactgtttta 127941
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>gb|AC090110.5| Homo sapiens 12 BAC RP11-495K13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 30272

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 23    cttctttcttcactgttttaaat 45
             ||||||||||| |||||||||||
Sbjct: 25084 cttctttcttctctgttttaaat 25106
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>emb|CR611292.1| full-length cDNA clone CS0DI072YH03 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 585

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 76  tagtcccatttccttccac 94
           |||||||||||||||||||
Sbjct: 476 tagtcccatttccttccac 494
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>emb|CR597801.1| full-length cDNA clone CS0CAP007YH01 of Thymus of Homo sapiens
           (human)
          Length = 748

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 76  tagtcccatttccttccac 94
           |||||||||||||||||||
Sbjct: 284 tagtcccatttccttccac 302
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>emb|BX936456.6| Zebrafish DNA sequence from clone DKEY-266J9 in linkage group 18,
              complete sequence
          Length = 173079

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 24     ttctttcttcactgtttta 42
              |||||||||||||||||||
Sbjct: 147885 ttctttcttcactgtttta 147903
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>gb|AC103693.2| Homo sapiens chromosome 18, clone CTD-2522C24, complete sequence
          Length = 193404

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 24    ttctttcttcactgtttta 42
             |||||||||||||||||||
Sbjct: 60893 ttctttcttcactgtttta 60875
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>gb|AC114310.2| Homo sapiens chromosome 5 clone RP11-285K13, complete sequence
          Length = 157366

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    ttctttcttcactgtttta 42
             |||||||||||||||||||
Sbjct: 63399 ttctttcttcactgtttta 63417
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>gb|AC079385.18| Homo sapiens 12q BAC RP11-482D24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181609

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 85     ttccttccacccttatttg 103
              |||||||||||||||||||
Sbjct: 114769 ttccttccacccttatttg 114751
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>ref|XM_692044.1| PREDICTED: Danio rerio similar to KIAA1201 protein (LOC568698), mRNA
          Length = 2256

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 20   cttcttctttcttcactgt 38
            |||||||||||||||||||
Sbjct: 2243 cttcttctttcttcactgt 2225
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>gb|AC160062.6| Mus musculus 6 BAC RP23-427I18 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 169540

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 27    tttcttcactgttttaaat 45
             |||||||||||||||||||
Sbjct: 15614 tttcttcactgttttaaat 15596
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>gb|AC008758.7| Homo sapiens chromosome 19 clone CTD-3105H18, complete sequence
          Length = 224573

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 19     tcttcttctttcttcactgtttt 41
              |||||||||||| ||||||||||
Sbjct: 143447 tcttcttctttcctcactgtttt 143425



 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 19     tcttcttctttcttcactgtttt 41
              |||||||||||| ||||||||||
Sbjct: 103614 tcttcttctttcctcactgtttt 103592
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>gb|AC000047.6| Combined sequence from cosmids c110 and c20 derived from Homo sapiens
            Chromosome 9p21, complete sequence
          Length = 41265

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 27   tttcttcactgttttaaat 45
            |||||||||||||||||||
Sbjct: 1909 tttcttcactgttttaaat 1891
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>gb|AC025457.5|AC025457 Homo sapiens chromosome 5 clone CTD-2202K16, complete sequence
          Length = 140734

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 24     ttctttcttcactgtttta 42
              |||||||||||||||||||
Sbjct: 122187 ttctttcttcactgtttta 122169
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>emb|BX832953.1|CNS0A0IA Arabidopsis thaliana Full-length cDNA Complete sequence from
          clone GSLTSIL25ZH01 of Silique of strain col-0 of
          Arabidopsis thaliana (thale cress)
          Length = 629

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 16 atatcttcttctttcttca 34
          |||||||||||||||||||
Sbjct: 43 atatcttcttctttcttca 25
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>gb|U67456.1|BOU67456 Brassica oleracea homeotic protein bobap3 (BobAP3) gene, complete
           cds
          Length = 2365

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 18  atcttcttctttcttcact 36
           |||||||||||||||||||
Sbjct: 941 atcttcttctttcttcact 959
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>gb|AY094355.1| Acinetobacter baumannii strain 19606 anthranilate synthase component
            I (trpE) gene, complete cds
          Length = 1832

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 11   atgctatatcttcttcttt 29
            |||||||||||||||||||
Sbjct: 1119 atgctatatcttcttcttt 1101
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>gb|AC132445.3| Mus musculus BAC clone RP23-173F23 from chromosome unknown, complete
             sequence
          Length = 194715

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 25    tctttcttcactgttttaaatga 47
             |||||||||||||||||| ||||
Sbjct: 34814 tctttcttcactgttttatatga 34792
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>emb|BX936320.11| Zebrafish DNA sequence from clone CH211-112L17 in linkage group 21,
             complete sequence
          Length = 114670

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    tcactgttttaaatgataa 50
             |||||||||||||||||||
Sbjct: 81032 tcactgttttaaatgataa 81050
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>gb|AC101349.8| Mus musculus chromosome 6, clone RP23-111E12, complete sequence
          Length = 196303

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 27     tttcttcactgttttaaat 45
              |||||||||||||||||||
Sbjct: 105833 tttcttcactgttttaaat 105815
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>gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosome 12, complete sequence
          Length = 193708

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 14     ctatatcttcttctttctt 32
              |||||||||||||||||||
Sbjct: 120999 ctatatcttcttctttctt 121017
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>emb|AL953903.8| Zebrafish DNA sequence from clone CH211-249G19, complete sequence
          Length = 180436

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     cttcttctttcttcactgt 38
              |||||||||||||||||||
Sbjct: 139896 cttcttctttcttcactgt 139914
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>emb|BX005233.10| Mouse DNA sequence from clone RP23-214I11 on chromosome X, complete
              sequence
          Length = 189118

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 25     tctttcttcactgttttaaatga 47
              |||||||||||||||||| ||||
Sbjct: 154544 tctttcttcactgttttatatga 154522
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>dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT04J15, TM0321,
             complete sequence
          Length = 127049

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    cccatttccttccaccctt 98
             |||||||||||||||||||
Sbjct: 28490 cccatttccttccaccctt 28472
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>emb|AL807385.11| Mouse DNA sequence from clone RP23-143B14 on chromosome 4, complete
              sequence
          Length = 221319

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 18     atcttcttctttcttcact 36
              |||||||||||||||||||
Sbjct: 215718 atcttcttctttcttcact 215700
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>dbj|AB060808.1| Homo sapiens gene for p16/CDKN2A, complete cds
          Length = 250000

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 27     tttcttcactgttttaaat 45
              |||||||||||||||||||
Sbjct: 119230 tttcttcactgttttaaat 119212


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,592,318
Number of Sequences: 3902068
Number of extensions: 1592318
Number of successful extensions: 138635
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138459
Number of HSP's gapped (non-prelim): 176
length of query: 104
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 83
effective length of database: 17,151,101,840
effective search space: 1423541452720
effective search space used: 1423541452720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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