Clone Name | rbastl47d12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NEUM_BUFJA (P08162) Mesotocin-neurophysin MT precursor [Contains... | 31 | 0.90 | 2 | LPXA_SYNY3 (Q55746) Acyl-[acyl-carrier-protein]--UDP-N-acetylglu... | 28 | 5.8 | 3 | APLP_MANSE (Q25490) Apolipophorins precursor [Contains: Apolipop... | 27 | 10.0 |
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>NEUM_BUFJA (P08162) Mesotocin-neurophysin MT precursor [Contains: Mesotocin| (MT); Neurophysin MT] Length = 125 Score = 30.8 bits (68), Expect = 0.90 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 Query: 34 TPCFSSRKPPINTGPHTHLSKLCCAHDS 117 +PC S RKP N G + S +CC H+S Sbjct: 84 SPCESGRKPCGNNGGNCARSGICCNHES 111
>LPXA_SYNY3 (Q55746) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine| O-acyltransferase (EC 2.3.1.129) (UDP-N-acetylglucosamine acyltransferase) Length = 276 Score = 28.1 bits (61), Expect = 5.8 Identities = 9/31 (29%), Positives = 20/31 (64%) Frame = +2 Query: 14 LSKKREVRHVSLVGNRRLTLAHTHISQNCAV 106 +++ E V+ +G+R L +A+ H++ NC + Sbjct: 106 INRATEEGAVTRIGDRNLLMAYAHVAHNCVI 136
>APLP_MANSE (Q25490) Apolipophorins precursor [Contains: Apolipophorin-2| (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)] Length = 3305 Score = 27.3 bits (59), Expect = 10.0 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 35 RHVSLVGNRRLTLAHTHISQNCAVLM 112 RH++ G R L H H+ +N VLM Sbjct: 2749 RHLTFPGTCRYVLIHDHVDRNFTVLM 2774 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,900,654 Number of Sequences: 219361 Number of extensions: 589916 Number of successful extensions: 1376 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1370 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1376 length of database: 80,573,946 effective HSP length: 79 effective length of database: 63,244,427 effective search space used: 1517866248 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)