>ref|NM_184232.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3193

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                        
Query: 187  ctatgcttcgatgtgcatgttccatgtcatggtgaagctcttccccagcggcaactccag 246
            |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||  ||||
Sbjct: 3034 ctatgcttcgatctgcatgttccaagtcatggtgaagctcttgcccagcggcaatgccag 2975

                                   
Query: 247  cccgccaacctccatcgtcacgc 269
            ||| || ||||||| | ||||||
Sbjct: 2974 ccctcccacctccaccatcacgc 2952

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                           
Query: 187     ctatgcttcgatgtgcatgttccatgtcatggtgaagctcttccccagcggcaactccag 246
               |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||  ||||
Sbjct: 1701639 ctatgcttcgatctgcatgttccaagtcatggtgaagctcttgcccagcggcaatgccag 1701580

                                      
Query: 247     cccgccaacctccatcgtcacgc 269
               ||| || ||||||| | ||||||
Sbjct: 1701579 ccctcccacctccaccatcacgc 1701557



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 265      cacgcccctcttctcgccct 284
                ||||||||||||||||||||
Sbjct: 35501711 cacgcccctcttctcgccct 35501692

>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504H10
          Length = 143515

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 187   ctatgcttcgatgtgcatgttccatgtcatggtgaagctcttccccagcggcaactccag 246
             |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||  ||||
Sbjct: 43982 ctatgcttcgatctgcatgttccaagtcatggtgaagctcttgcccagcggcaatgccag 43923

                                    
Query: 247   cccgccaacctccatcgtcacgc 269
             ||| || ||||||| | ||||||
Sbjct: 43922 ccctcccacctccaccatcacgc 43900

>dbj|AK102309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090B18, full
            insert sequence
          Length = 3486

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                        
Query: 187  ctatgcttcgatgtgcatgttccatgtcatggtgaagctcttccccagcggcaactccag 246
            |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||  ||||
Sbjct: 3035 ctatgcttcgatctgcatgttccaagtcatggtgaagctcttgcccagcggcaatgccag 2976

                                   
Query: 247  cccgccaacctccatcgtcacgc 269
            ||| || ||||||| | ||||||
Sbjct: 2975 ccctcccacctccaccatcacgc 2953

>dbj|AK063966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A04, full
            insert sequence
          Length = 3193

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                        
Query: 187  ctatgcttcgatgtgcatgttccatgtcatggtgaagctcttccccagcggcaactccag 246
            |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||  ||||
Sbjct: 3034 ctatgcttcgatctgcatgttccaagtcatggtgaagctcttgcccagcggcaatgccag 2975

                                   
Query: 247  cccgccaacctccatcgtcacgc 269
            ||| || ||||||| | ||||||
Sbjct: 2974 ccctcccacctccaccatcacgc 2952

>gb|AY106982.1| Zea mays PCO102337 mRNA sequence
          Length = 641

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                       
Query: 186 cctatgcttcgatgtgcatgttccatgtcatggtgaagctcttccccagcggcaactcca 245
           |||||||||||||  ||||||||||||||||||||||||||||||| ||||||||  |||
Sbjct: 207 cctatgcttcgatccgcatgttccatgtcatggtgaagctcttcccgagcggcaatgcca 266

                  
Query: 246 gcccgcc 252
           |||||||
Sbjct: 267 gcccgcc 273

>emb|BX901956.4| Zebrafish DNA sequence from clone CH211-284C12 in linkage group 3,
              complete sequence
          Length = 197042

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 6      ggtgaatcagagttcacaaatggtgt 31
              ||||| ||||||||||||||||||||
Sbjct: 168693 ggtgattcagagttcacaaatggtgt 168668

>emb|AL935200.9| Zebrafish DNA sequence from clone CH211-237I5, complete sequence
          Length = 160710

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 6     ggtgaatcagagttcacaaatggtgt 31
             ||||| ||||||||||||||||||||
Sbjct: 56188 ggtgattcagagttcacaaatggtgt 56213

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 277     ctcgccctccagggcgtcctc 297
               |||||||||||||||||||||
Sbjct: 4761899 ctcgccctccagggcgtcctc 4761919

>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     tttaagctctataaatttaa 110
              ||||||||||||||||||||
Sbjct: 798940 tttaagctctataaatttaa 798959

>ref|NM_190436.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1635

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 cacgcccctcttctcgccct 284
           ||||||||||||||||||||
Sbjct: 24  cacgcccctcttctcgccct 43

>gb|AY623084.1| Crocus sativus unknown mRNA
          Length = 532

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 215 atggtgaagctcttccccag 234
           ||||||||||||||||||||
Sbjct: 359 atggtgaagctcttccccag 378

>ref|XM_001000967.1| PREDICTED: Mus musculus similar to Myosin heavy chain, cardiac muscle
            alpha isoform (MyHC-alpha) (LOC639686), mRNA
          Length = 5817

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  ttccatgtcatggtgaagct 225
            ||||||||||||||||||||
Sbjct: 3549 ttccatgtcatggtgaagct 3530

>ref|XM_001002743.1| PREDICTED: Mus musculus similar to Myosin heavy chain, cardiac muscle
            alpha isoform (MyHC-alpha) (LOC677358), mRNA
          Length = 5820

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  ttccatgtcatggtgaagct 225
            ||||||||||||||||||||
Sbjct: 3549 ttccatgtcatggtgaagct 3530

>ref|XM_992311.1| PREDICTED: Mus musculus similar to Myosin heavy chain, cardiac muscle
            alpha isoform (MyHC-alpha) (LOC667772), mRNA
          Length = 5820

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  ttccatgtcatggtgaagct 225
            ||||||||||||||||||||
Sbjct: 3549 ttccatgtcatggtgaagct 3530

>gb|AC122233.4| Mus musculus BAC clone RP23-137D14 from 16, complete sequence
          Length = 203964

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   ttccatgtcatggtgaagct 225
             ||||||||||||||||||||
Sbjct: 52009 ttccatgtcatggtgaagct 52028

>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 87      actttttaagctctataaat 106
               ||||||||||||||||||||
Sbjct: 1103611 actttttaagctctataaat 1103630

>emb|AL160010.14| Human DNA sequence from clone RP11-146P20 on chromosome 10 Contains
             part of the gene for VPS10 domain receptor protein SORCS
             1, complete sequence
          Length = 158724

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   catgcagacggaagcagagg 167
             ||||||||||||||||||||
Sbjct: 93875 catgcagacggaagcagagg 93894

>emb|AL139076.2|CJ11168X3 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
             3/6
          Length = 317511

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    tttaagctctataaatttaa 110
             ||||||||||||||||||||
Sbjct: 97835 tttaagctctataaatttaa 97854

>gb|AC097061.2| Homo sapiens chromosome 1 clone RP11-415L24, complete sequence
          Length = 165311

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   atgcagacggaagcagaggc 168
             ||||||||||||||||||||
Sbjct: 90987 atgcagacggaagcagaggc 90968

>gb|AC018793.12| Homo sapiens chromosome 11, clone RP11-437G21, complete sequence
          Length = 202956

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   aagcagaggcaaatgcagct 178
             ||||||||||||||||||||
Sbjct: 99826 aagcagaggcaaatgcagct 99807

>ref|XM_396317.2| PREDICTED: Apis mellifera similar to CG33171-PC, isoform C
            (LOC412865), partial mRNA
          Length = 3766

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 284  tccagggcgtcctcttctcc 303
            ||||||||||||||||||||
Sbjct: 2009 tccagggcgtcctcttctcc 1990

>gb|AY232508.1| Donacia japana isolate N264 cytochrome oxidase subunit I gene,
           partial cds; mitochondrial gene for mitochondrial
           product
          Length = 750

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ttttaagctctataaattta 109
           ||||||||||||||||||||
Sbjct: 645 ttttaagctctataaattta 664

>gb|AY232507.1| Donacia japana isolate N119 cytochrome oxidase subunit I gene,
           partial cds; mitochondrial gene for mitochondrial
           product
          Length = 750

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ttttaagctctataaattta 109
           ||||||||||||||||||||
Sbjct: 645 ttttaagctctataaattta 664

>gb|AY232506.1| Donacia japana isolate N79 cytochrome oxidase subunit I gene,
           partial cds; mitochondrial gene for mitochondrial
           product
          Length = 750

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ttttaagctctataaattta 109
           ||||||||||||||||||||
Sbjct: 645 ttttaagctctataaattta 664

>gb|AF315118.1|AF315118 Populus euphratica clone PSR1 salt-induced mRNA sequence
          Length = 1079

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 atggtgaagctcttccccag 234
           ||||||||||||||||||||
Sbjct: 207 atggtgaagctcttccccag 188

>gb|AC010894.10| Homo sapiens BAC clone RP11-483E17 from 2, complete sequence
          Length = 181663

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     agctctataaatttaaatta 114
              ||||||||||||||||||||
Sbjct: 175855 agctctataaatttaaatta 175836

>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446G04
          Length = 143515

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   cacgcccctcttctcgccct 284
             ||||||||||||||||||||
Sbjct: 31898 cacgcccctcttctcgccct 31879

>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1088C09
          Length = 154084

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 265    cacgcccctcttctcgccct 284
              ||||||||||||||||||||
Sbjct: 125660 cacgcccctcttctcgccct 125641

>dbj|AB005236.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIK22
          Length = 82035

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    tactttttaagctctataaa 105
             ||||||||||||||||||||
Sbjct: 24387 tactttttaagctctataaa 24368

>dbj|AK121100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069G03, full
           insert sequence
          Length = 1978

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 cacgcccctcttctcgccct 284
           ||||||||||||||||||||
Sbjct: 70  cacgcccctcttctcgccct 89

>ref|XM_315898.2| Anopheles gambiae str. PEST ENSANGP00000004512 (ENSANGG00000003543),
            partial mRNA
          Length = 3441

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 120  gacgacgacgagtcgaacga 139
            ||||||||||||||||||||
Sbjct: 1237 gacgacgacgagtcgaacga 1256

>gb|J04639.1|TTHTAQP1A Thermus aquaticus DNA polymerase (PolI) gene
          Length = 2626

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  atggtgaagctcttccccag 234
            ||||||||||||||||||||
Sbjct: 2413 atggtgaagctcttccccag 2432

>dbj|D32013.1|TTHDNAP Thermus aquaticus gene for DNA polymerase, complete cds
          Length = 3026

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  atggtgaagctcttccccag 234
            ||||||||||||||||||||
Sbjct: 2293 atggtgaagctcttccccag 2312


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,812,152
Number of Sequences: 3902068
Number of extensions: 2812152
Number of successful extensions: 60624
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60434
Number of HSP's gapped (non-prelim): 190
length of query: 335
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 313
effective length of database: 17,147,199,772
effective search space: 5367073528636
effective search space used: 5367073528636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)