ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl47d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CIDEB_MOUSE (O70303) Cell death activator CIDE-B (Cell death-ind... 31 0.83

>CIDEB_MOUSE (O70303) Cell death activator CIDE-B (Cell death-inducing DFFA-like|
           effector B)
          Length = 219

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 16/25 (64%), Positives = 18/25 (72%)
 Frame = +3

Query: 303 QG*SHLLLGAISCRLQEVVEGAGRW 377
           QG  H+LLG IS  L+ VVEGA RW
Sbjct: 186 QGLGHMLLG-ISSTLRHVVEGADRW 209


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,021,746
Number of Sequences: 219361
Number of extensions: 935823
Number of successful extensions: 1525
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1523
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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