>ref|XM_642264.1| Dictyostelium discoideum hypothetical protein (DDB0189592), partial
            mRNA
          Length = 3192

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 86   tactactaataatagcaccacct 108
            |||||||||||||||||||||||
Sbjct: 2808 tactactaataatagcaccacct 2830

>gb|AC079352.5| Homo sapiens BAC clone RP11-915C24 from 2, complete sequence
          Length = 158180

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 66     aattccagtcaaaatttcagta 87
              ||||||||||||||||||||||
Sbjct: 148557 aattccagtcaaaatttcagta 148578

>gb|AC150401.3| Branchiostoma floridae clone CH302-30M10, complete sequence
          Length = 138773

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    catagtattacattttgtgca 40
             |||||||||||||||||||||
Sbjct: 77153 catagtattacattttgtgca 77133

>gb|AC013473.8| Homo sapiens BAC clone RP11-504G5 from 2, complete sequence
          Length = 170781

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     gaattccagtcaaaatttcag 85
              |||||||||||||||||||||
Sbjct: 151617 gaattccagtcaaaatttcag 151637

>emb|BX004964.9| Zebrafish DNA sequence from clone DKEY-7I4, complete sequence
          Length = 211018

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 96     aatagcaccacctaggggaataatgaaca 124
              ||||||||||||||| |||| ||||||||
Sbjct: 179104 aatagcaccacctagtggaacaatgaaca 179076

>gb|AC144849.2| Mus musculus BAC clone RP24-482B19 from chromosome Y, complete
            sequence
          Length = 184015

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 272  aaaacaacagacctccaaaaaatt 295
            ||||||||||||||| ||||||||
Sbjct: 3351 aaaacaacagacctctaaaaaatt 3374

>gb|AF546992.1| Acorus gramineus NADH dehydrogenase subunit F (ndhF) gene, partial
            cds; chloroplast
          Length = 2089

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 74   tcaaaatttcagtactactaataatagc 101
            |||||||||||||| |||||| ||||||
Sbjct: 1363 tcaaaatttcagtagtactaaaaatagc 1390

>gb|AC127683.10| Mus musculus BAC clone RP24-171F12 from chromosome 7, complete sequence
          Length = 158570

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    attcatagtattacattttg 36
             ||||||||||||||||||||
Sbjct: 32324 attcatagtattacattttg 32305

>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence
          Length = 113622

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    attcatagtattacattttg 36
             ||||||||||||||||||||
Sbjct: 30317 attcatagtattacattttg 30298

>emb|AL592207.9| Human DNA sequence from clone RP11-495P10 on chromosome 1 Contains six
             novel genes, the 3' end of a novel gene, a novel
             pseudogene and the 5' end of a novel pseudogene, complete
             sequence
          Length = 173090

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 300   ggtaagacgagcctgagcagctcg 323
             ||||||| ||||||||||||||||
Sbjct: 82236 ggtaagaggagcctgagcagctcg 82213

>emb|AL590652.10| Human DNA sequence from clone RP11-79N23 on chromosome 6 Contains a
             novel gene, complete sequence
          Length = 111616

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    cagtactactaataatagca 102
             ||||||||||||||||||||
Sbjct: 28748 cagtactactaataatagca 28729

>emb|AL513475.13| Human DNA sequence from clone RP11-277I20 on chromosome 6 Contains part
              of the UTRN gene for utrophin (homologous to dystrophin)
              (DRP, DRP1, DMDL), a novel pseudogene similar to
              hypothetical protein HT023 and a novel pseudogene, complete
              sequence
          Length = 191752

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    atatcaccaataaccagtta 158
              ||||||||||||||||||||
Sbjct: 118850 atatcaccaataaccagtta 118831

>emb|AL450382.7| Human DNA sequence from clone RP11-56A21 on chromosome 10 Contains part
              of gene FLJ10824, a solute carrier family 9
              (sodium/hydrogen exchanger) isoform 5 (SLC9A5) pseudogene,
              the ASAH2 gene for N-acylsphingosine amidohydrolase
              (non-lysosomal ceramidase) 2 and a dynein cytoplasmic
              intermediate polypeptide 2 (DNCI2) pseudogene, complete
              sequence
          Length = 162228

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      aaacaagaacggtattcata 23
              ||||||||||||||||||||
Sbjct: 158045 aaacaagaacggtattcata 158064

>emb|AL031595.4|HS671O14 Human DNA sequence from clone RP4-671O14 on chromosome 22q13.2-13.33,
             complete sequence
          Length = 102739

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    aattccagtcaaaatttcag 85
             ||||||||||||||||||||
Sbjct: 63406 aattccagtcaaaatttcag 63387

>emb|BX571852.20| Zebrafish DNA sequence from clone DKEY-175N6 in linkage group 10,
             complete sequence
          Length = 178333

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 271   caaaacaacagacctccaaaaaat 294
             |||||||||||||| |||||||||
Sbjct: 32742 caaaacaacagaccaccaaaaaat 32765

>emb|AL954167.4| Mouse DNA sequence from clone RP23-300M3 on chromosome 11 Contains a zinc
              finger protein pseudogene, complete sequence
          Length = 190351

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 19     tcatagtattacattttgtgcatg 42
              ||||| ||||||||||||||||||
Sbjct: 110384 tcataatattacattttgtgcatg 110407

>gb|AY007647.2| Acorus calamus NADH dehydrogenase subunit F (ndhF) gene, partial cds;
            chloroplast gene for chloroplast product
          Length = 2078

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 74   tcaaaatttcagtactactaataatagc 101
            |||||||||||||| |||||| ||||||
Sbjct: 1358 tcaaaatttcagtagtactaaaaatagc 1385

>gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H10 map CIC11C08, complete
             sequence
          Length = 96066

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tttcagtactactaataata 99
             ||||||||||||||||||||
Sbjct: 75259 tttcagtactactaataata 75278

>gb|AC182111.1| Mus musculus BAC clone RP24-415L2 from chromosome y, complete sequence
          Length = 162320

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 272   aaaacaacagacctccaaaaaatt 295
             ||||||||||||||| ||||||||
Sbjct: 21643 aaaacaacagacctctaaaaaatt 21666

>gb|AC109506.21| Mus musculus chromosome 7, clone RP23-344G21, complete sequence
          Length = 227676

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     attcatagtattacattttg 36
              ||||||||||||||||||||
Sbjct: 193073 attcatagtattacattttg 193054

>gb|AC163707.3| Gallus gallus BAC clone CH261-71N11 from chromosome ul, complete
             sequence
          Length = 174599

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   aaaacaacagacctccaaaa 291
             ||||||||||||||||||||
Sbjct: 82621 aaaacaacagacctccaaaa 82602

>gb|AC149597.4| Mus musculus BAC clone RP24-90B12 from Y, complete sequence
          Length = 198224

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 272   aaaacaacagacctccaaaaaatt 295
             ||||||||||||||| ||||||||
Sbjct: 13002 aaaacaacagacctctaaaaaatt 12979

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 74     tcaaaatttcagtactactaataatagc 101
              |||||||||||||| |||||| ||||||
Sbjct: 110864 tcaaaatttcagtagtactaaaaatagc 110837

>gb|AC165336.4| Mus musculus BAC clone RP24-470O8 from chromosome y, complete sequence
          Length = 153266

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 272   aaaacaacagacctccaaaaaatt 295
             ||||||||||||||| ||||||||
Sbjct: 50297 aaaacaacagacctctaaaaaatt 50320


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,479,523
Number of Sequences: 3902068
Number of extensions: 3479523
Number of successful extensions: 60976
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60932
Number of HSP's gapped (non-prelim): 44
length of query: 389
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 367
effective length of database: 17,147,199,772
effective search space: 6293022316324
effective search space used: 6293022316324
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)