>LCYB_NARPS (Q40424) Lycopene beta cyclase, chloroplast precursor (EC 1.14.-.-)|
          Length = 503

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +1

Query: 22  IRTLMFA*PDQSTML*FEPTKITIR---KFPSYREPLLQQLDYAPATISSLEEAQRCTAP 192
           I T ++A P  S  +  E T +  R   K    +E ++ +L++    I S+EE +RC  P
Sbjct: 283 IPTFLYAMPFSSNRIFLEETSLVARPGLKMEDIQERMVARLNHLGIRIKSIEEDERCVIP 342

>GOX2_ARATH (Q9LRR9) Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 (EC|
           1.1.3.15) (Glycolate oxidase 2) (GOX 2) (Short chain
           alpha-hydroxy acid oxidase 2)
          Length = 367

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +1

Query: 127 QQLDYAPATISSLEEAQRCT 186
           +QLDY PATIS+LEE  + T
Sbjct: 257 RQLDYVPATISALEEVVKAT 276

>GOX1_ARATH (Q9LRS0) Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 (EC|
           1.1.3.15) (Glycolate oxidase 1) (GOX 1) (Short chain
           alpha-hydroxy acid oxidase 1)
          Length = 367

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +1

Query: 127 QQLDYAPATISSLEEAQRCT 186
           +QLDY PATIS+LEE  + T
Sbjct: 257 RQLDYVPATISALEEVVKAT 276

>TECTA_CHICK (Q9YH85) Alpha-tectorin precursor|
          Length = 2120

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +1

Query: 145 PATISSLEEAQRCTAPCP 198
           PAT S L    RCTAPCP
Sbjct: 591 PATCSDLTAPLRCTAPCP 608

>CSPG3_PANTR (Q5IS41) Neurocan core protein precursor (Chondroitin sulfate|
           proteoglycan 3)
          Length = 1321

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +1

Query: 103 PSYREPLLQQLDYAPATISSLEEAQRCTAPCPSSSILFS 219
           P ++EPL+   +  P  +   +E+Q+  +P P   +L S
Sbjct: 402 PDFQEPLVSSGEEEPLILEEKQESQQTLSPTPGDPMLAS 440


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,872,334
Number of Sequences: 219361
Number of extensions: 852705
Number of successful extensions: 2169
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2169
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)