Clone Name | rbastl47c02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RR2_PORPU (P51249) Chloroplast 30S ribosomal protein S2 | 29 | 4.0 |
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>RR2_PORPU (P51249) Chloroplast 30S ribosomal protein S2| Length = 241 Score = 28.9 bits (63), Expect = 4.0 Identities = 13/29 (44%), Positives = 22/29 (75%) Frame = +3 Query: 48 VKANITR*KQLQQGNSSGIVNYSDQLPHK 134 +K+ +TR +QL++ +SSG++ DQLP K Sbjct: 107 IKSRVTRLRQLEEQDSSGLI---DQLPKK 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,837,012 Number of Sequences: 219361 Number of extensions: 266690 Number of successful extensions: 566 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 563 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 566 length of database: 80,573,946 effective HSP length: 29 effective length of database: 74,212,477 effective search space used: 1781099448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)