ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl47c02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 111 7e-22
2gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome... 111 7e-22
3gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome... 111 7e-22
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 111 7e-22
5dbj|AK102826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 7e-22
6dbj|AK066896.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 7e-22
7dbj|AK060809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 7e-22
8gb|AY109810.1| Zea mays CL5193_1 mRNA sequence 66 3e-08
9gb|AC092638.2| Homo sapiens BAC clone RP11-363G3 from 2, complet... 42 0.50
10gb|AC004219.1| Homo sapiens chromosome 5, P1 clone 1130f1 (LBNL ... 40 2.0
11gb|AC091278.6| Mus musculus chromosome 1, clone RP23-294D6, comp... 40 2.0
12gb|AC146265.2| Pan troglodytes BAC clone RP43-28O21 from 7, comp... 40 2.0
13gb|AC010908.3| Homo sapiens BAC clone CTD-3073A19 from 7, comple... 40 2.0
14emb|CR749176.14| Zebrafish DNA sequence from clone DKEY-43B13 in... 40 2.0
15emb|AL356356.17| Human DNA sequence from clone RP11-54A4 on chro... 40 2.0
16gb|AC097257.7| Rattus norvegicus X BAC CH230-180I13 (Children's ... 40 2.0
17emb|AL928829.6| Mouse DNA sequence from clone RP23-390B17 on chr... 40 2.0
18gb|AC133094.4| Mus musculus BAC clone RP23-479K21 from 8, comple... 40 2.0
19gb|AC145448.3| Dasypus novemcinctus clone VMRC5-267J9, complete ... 38 7.8
20gb|BC056081.1| Xenopus laevis plasma membrane protein 1B3, mRNA ... 38 7.8
21gb|U23512.1| Caenorhabditis elegans cosmid M01G4, complete sequence 38 7.8
22gb|AC104844.2| Oryza sativa (japonica cultivar-group) chromosome... 38 7.8
23gb|AC016877.11| Homo sapiens chromosome 8, clone RP11-44N12, com... 38 7.8
24gb|AC122843.2| Mus musculus BAC clone RP23-149L20 from 6, comple... 38 7.8
25gb|U00032.2| Caenorhabditis elegans cosmid F37A4, complete sequence 38 7.8
26gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome... 38 7.8
27emb|AL591485.7| Human DNA sequence from clone RP11-293C4 on chro... 38 7.8
28gb|AC116533.11| Homo sapiens chromosome 11, clone RP11-466H18, c... 38 7.8
29emb|AL354863.29| Human DNA sequence from clone RP11-245J24 on ch... 38 7.8
30emb|AL162585.15| Human DNA sequence from clone RP11-148I22 on ch... 38 7.8
31emb|AL157380.15| Human DNA sequence from clone RP11-358K18 on ch... 38 7.8
32emb|AL133331.27| Human DNA sequence from clone RP11-157E14 on ch... 38 7.8
33gb|AC124653.5| Homo sapiens chromosome 11, clone RP11-100H14, co... 38 7.8
34emb|Z28120.1|SCYKL120W S.cerevisiae chromosome XI reading frame ... 38 7.8
35gb|AY241925.1| Caenorhabditis elegans chondroitin disaccharide p... 38 7.8
36gb|AC021580.9| Homo sapiens chromosome 9, clone RP11-1091N2, com... 38 7.8
37gb|AC104986.5| Homo sapiens chromosome 8, clone RP11-410L14, com... 38 7.8
38gb|AC110057.3| Homo sapiens chromosome 11, clone CTD1-2361F20, c... 38 7.8
39gb|AC097504.3| Homo sapiens BAC clone RP11-362F19 from 4, comple... 38 7.8
40gb|AF315583.1|AF315583 Acinetobacter calcoaceticus dTDP-D-glucos... 38 7.8
41emb|BX324143.9| Zebrafish DNA sequence from clone CH211-197D1 in... 38 7.8
42gb|S44213.1| YKL522=mitochondrial ADP/ATP carrier protein homolo... 38 7.8
43gb|AC123427.5| Rattus norvegicus 2 BAC CH230-523K1 (Children's H... 38 7.8
44gb|AC120670.8| Rattus norvegicus 2 BAC CH230-23N23 (Children's H... 38 7.8
45dbj|AK082622.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 38 7.8
46gb|AC151305.2| Xenopus tropicalis clone CH216-36A20, complete se... 38 7.8
47gb|AC156505.6| Mus musculus 10 BAC RP24-270N22 (Roswell Park Can... 38 7.8
48gb|AC124029.15| Mus musculus chromosome 1, clone RP23-238E7, com... 38 7.8
49dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.8
50gb|AC016762.5| Homo sapiens BAC clone RP11-540F24 from 2, comple... 38 7.8
51gb|AC145938.4| Pan troglodytes BAC clone RP43-18H20 from chromos... 38 7.8
52gb|AC015987.6| Homo sapiens chromosome 7 clone RP11-207O19, comp... 38 7.8
53gb|AC010533.6|AC010533 Homo sapiens chromosome 16 clone RP11-229... 38 7.8
54gb|AC107419.3| Homo sapiens X BAC RP11-241K4 (Roswell Park Cance... 38 7.8
55gb|AC129501.3| Homo sapiens chromosome 11, clone RP11-1095K7, co... 38 7.8
56gb|AC024083.3|AC024083 Homo sapiens chromosome 7 clone RP11-24I2... 38 7.8
57gb|AC135893.2| Homo sapiens 3 BAC RP11-643E20 (Roswell Park Canc... 38 7.8
58gb|AC153975.4| Mus musculus 10 BAC RP24-186L12 (Roswell Park Can... 38 7.8
59dbj|AP006587.1| Homo sapiens genomic DNA, chromosome 11 clone:RP... 38 7.8
60emb|Z28118.1|SCYKL119C S.cerevisiae chromosome XI reading frame ... 38 7.8
61gb|AC006597.2|AC006597 Homo sapiens Chromosome 11p14.3 PAC clone... 38 7.8
62gb|AC103663.15| Mus musculus chromosome 1, clone RP23-219O12, co... 38 7.8
63dbj|AP003477.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 38 7.8
64dbj|AP005791.2| Homo sapiens genomic DNA, chromosome 8q22, clone... 38 7.8
65gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 7.8
66gb|AC134435.3| Mus musculus BAC clone RP24-423J19 from 1, comple... 38 7.8
67gb|AC131685.4| Mus musculus BAC clone RP23-372G24 from 1, comple... 38 7.8
68gb|AC170088.9| Mus musculus BAC RP23-94A1 (Roswell Park Cancer ... 38 7.8
69gb|U73642.1|U73642 Human Chromosome 11 Cosmid cSRL30h11, complet... 38 7.8
70emb|Z81131.2|CET24D1 Caenorhabditis elegans Cosmid T24D1, comple... 38 7.8
71gb|AC158644.13| Mus musculus 6 BAC RP23-479B14 (Roswell Park Can... 38 7.8
72emb|AL627093.17| Mouse DNA sequence from clone RP23-450P8 on chr... 38 7.8
73emb|AL845305.5| Mouse DNA sequence from clone RP23-202K13 on chr... 38 7.8
74emb|AL669898.17| Mouse DNA sequence from clone RP23-6C3 on chrom... 38 7.8
75gb|M93350.1|YSCVPH2A Saccharomyces cerevisiae integral membrane ... 38 7.8
76gb|AC129484.8| Homo sapiens chromosome 11, clone RP13-337F11, co... 38 7.8
77dbj|D11472.1|YSCVAATP Yeast VMA12 gene for a polypeptide require... 38 7.8
78dbj|AP003691.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 38 7.8 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  111 bits (56), Expect = 7e-22
 Identities = 71/76 (93%)
 Strand = Plus / Plus

                                                                           
Query: 75      cagctgcaacaaggaaacagctcaggaatcgtcaattactcagatcaactgccacataaa 134
               |||||||| |||| |||||||||||||||| |||||||||||| ||||||||||| ||||
Sbjct: 9001901 cagctgcatcaagcaaacagctcaggaatcctcaattactcaggtcaactgccacgtaaa 9001960

                               
Query: 135     catacagaacattaaa 150
               ||||||||||||||||
Sbjct: 9001961 catacagaacattaaa 9001976



 Score = 46.1 bits (23), Expect = 0.032
 Identities = 57/67 (85%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                           
Query: 5       aacatacatatttcattctcagggctatggttcgtacaaacatgtaaaggcaaacattac 64
               |||||| ||||||| |||||||   ||||||| ||||| || | |||| |||||||||||
Sbjct: 9001815 aacataaatatttccttctcagtattatggtt-gtacagacttataaaagcaaacattac 9001873

                      
Query: 65      cagataa 71
               |||||||
Sbjct: 9001874 cagataa 9001880
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>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09,
              complete sequence
          Length = 143595

 Score =  111 bits (56), Expect = 7e-22
 Identities = 71/76 (93%)
 Strand = Plus / Plus

                                                                          
Query: 75     cagctgcaacaaggaaacagctcaggaatcgtcaattactcagatcaactgccacataaa 134
              |||||||| |||| |||||||||||||||| |||||||||||| ||||||||||| ||||
Sbjct: 126762 cagctgcatcaagcaaacagctcaggaatcctcaattactcaggtcaactgccacgtaaa 126821

                              
Query: 135    catacagaacattaaa 150
              ||||||||||||||||
Sbjct: 126822 catacagaacattaaa 126837



 Score = 46.1 bits (23), Expect = 0.032
 Identities = 57/67 (85%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                          
Query: 5      aacatacatatttcattctcagggctatggttcgtacaaacatgtaaaggcaaacattac 64
              |||||| ||||||| |||||||   ||||||| ||||| || | |||| |||||||||||
Sbjct: 126676 aacataaatatttccttctcagtattatggtt-gtacagacttataaaagcaaacattac 126734

                     
Query: 65     cagataa 71
              |||||||
Sbjct: 126735 cagataa 126741
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>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08,
            complete sequence
          Length = 99910

 Score =  111 bits (56), Expect = 7e-22
 Identities = 71/76 (93%)
 Strand = Plus / Plus

                                                                        
Query: 75   cagctgcaacaaggaaacagctcaggaatcgtcaattactcagatcaactgccacataaa 134
            |||||||| |||| |||||||||||||||| |||||||||||| ||||||||||| ||||
Sbjct: 8937 cagctgcatcaagcaaacagctcaggaatcctcaattactcaggtcaactgccacgtaaa 8996

                            
Query: 135  catacagaacattaaa 150
            ||||||||||||||||
Sbjct: 8997 catacagaacattaaa 9012



 Score = 46.1 bits (23), Expect = 0.032
 Identities = 57/67 (85%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                        
Query: 5    aacatacatatttcattctcagggctatggttcgtacaaacatgtaaaggcaaacattac 64
            |||||| ||||||| |||||||   ||||||| ||||| || | |||| |||||||||||
Sbjct: 8851 aacataaatatttccttctcagtattatggtt-gtacagacttataaaagcaaacattac 8909

                   
Query: 65   cagataa 71
            |||||||
Sbjct: 8910 cagataa 8916
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  111 bits (56), Expect = 7e-22
 Identities = 71/76 (93%)
 Strand = Plus / Plus

                                                                           
Query: 75      cagctgcaacaaggaaacagctcaggaatcgtcaattactcagatcaactgccacataaa 134
               |||||||| |||| |||||||||||||||| |||||||||||| ||||||||||| ||||
Sbjct: 8999736 cagctgcatcaagcaaacagctcaggaatcctcaattactcaggtcaactgccacgtaaa 8999795

                               
Query: 135     catacagaacattaaa 150
               ||||||||||||||||
Sbjct: 8999796 catacagaacattaaa 8999811



 Score = 46.1 bits (23), Expect = 0.032
 Identities = 57/67 (85%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                           
Query: 5       aacatacatatttcattctcagggctatggttcgtacaaacatgtaaaggcaaacattac 64
               |||||| ||||||| |||||||   ||||||| ||||| || | |||| |||||||||||
Sbjct: 8999650 aacataaatatttccttctcagtattatggtt-gtacagacttataaaagcaaacattac 8999708

                      
Query: 65      cagataa 71
               |||||||
Sbjct: 8999709 cagataa 8999715
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>dbj|AK102826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109C10, full
            insert sequence
          Length = 3185

 Score =  111 bits (56), Expect = 7e-22
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                        
Query: 75   cagctgcaacaaggaaacagctcaggaatcgtcaattactcagatcaactgccacataaa 134
            |||||||| |||| |||||||||||||||| |||||||||||| ||||||||||| ||||
Sbjct: 2815 cagctgcatcaagcaaacagctcaggaatcctcaattactcaggtcaactgccacgtaaa 2756

                            
Query: 135  catacagaacattaaa 150
            ||||||||||||||||
Sbjct: 2755 catacagaacattaaa 2740
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>dbj|AK066896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091L22, full
            insert sequence
          Length = 2881

 Score =  111 bits (56), Expect = 7e-22
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                        
Query: 75   cagctgcaacaaggaaacagctcaggaatcgtcaattactcagatcaactgccacataaa 134
            |||||||| |||| |||||||||||||||| |||||||||||| ||||||||||| ||||
Sbjct: 2795 cagctgcatcaagcaaacagctcaggaatcctcaattactcaggtcaactgccacgtaaa 2736

                            
Query: 135  catacagaacattaaa 150
            ||||||||||||||||
Sbjct: 2735 catacagaacattaaa 2720



 Score = 42.1 bits (21), Expect = 0.50
 Identities = 55/65 (84%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                        
Query: 7    catacatatttcattctcagggctatggttcgtacaaacatgtaaaggcaaacattacca 66
            |||| ||||||| |||||||   ||||||| ||||| || | |||| |||||||||||||
Sbjct: 2879 cataaatatttccttctcagtattatggtt-gtacagacttataaaagcaaacattacca 2821

                 
Query: 67   gataa 71
            |||||
Sbjct: 2820 gataa 2816
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>dbj|AK060809.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-G06, full
            insert sequence
          Length = 2169

 Score =  111 bits (56), Expect = 7e-22
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                        
Query: 75   cagctgcaacaaggaaacagctcaggaatcgtcaattactcagatcaactgccacataaa 134
            |||||||| |||| |||||||||||||||| |||||||||||| ||||||||||| ||||
Sbjct: 2083 cagctgcatcaagcaaacagctcaggaatcctcaattactcaggtcaactgccacgtaaa 2024

                            
Query: 135  catacagaacattaaa 150
            ||||||||||||||||
Sbjct: 2023 catacagaacattaaa 2008



 Score = 46.1 bits (23), Expect = 0.032
 Identities = 57/67 (85%), Gaps = 1/67 (1%)
 Strand = Plus / Minus

                                                                        
Query: 5    aacatacatatttcattctcagggctatggttcgtacaaacatgtaaaggcaaacattac 64
            |||||| ||||||| |||||||   ||||||| ||||| || | |||| |||||||||||
Sbjct: 2169 aacataaatatttccttctcagtattatggtt-gtacagacttataaaagcaaacattac 2111

                   
Query: 65   cagataa 71
            |||||||
Sbjct: 2110 cagataa 2104
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>gb|AY109810.1| Zea mays CL5193_1 mRNA sequence
          Length = 1219

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                 
Query: 114  tcagatcaactgccacataaacatacagaacattaaa 150
            ||||||||||||||||||||||| |||||||||||||
Sbjct: 1092 tcagatcaactgccacataaacacacagaacattaaa 1056



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 44/51 (86%), Gaps = 2/51 (3%)
 Strand = Plus / Minus

                                                               
Query: 23   tcagggctatggttcg--tacaaacatgtaaaggcaaacattaccagataa 71
            |||||| |||||||||  ||||||  |||| | ||||||||||||||||||
Sbjct: 1194 tcagggttatggttcgcgtacaaatctgtagaagcaaacattaccagataa 1144
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>gb|AC092638.2| Homo sapiens BAC clone RP11-363G3 from 2, complete sequence
          Length = 167941

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     aacaaggaaacagctcaggaa 102
              |||||||||||||||||||||
Sbjct: 125568 aacaaggaaacagctcaggaa 125548
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>gb|AC004219.1| Homo sapiens chromosome 5, P1 clone 1130f1 (LBNL H40), complete
             sequence
          Length = 57795

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aaacatacatatttcattct 23
             ||||||||||||||||||||
Sbjct: 32236 aaacatacatatttcattct 32255
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>gb|AC091278.6| Mus musculus chromosome 1, clone RP23-294D6, complete sequence
          Length = 244656

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    cacataaacatacagaacat 146
              ||||||||||||||||||||
Sbjct: 168018 cacataaacatacagaacat 167999
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>gb|AC146265.2| Pan troglodytes BAC clone RP43-28O21 from 7, complete sequence
          Length = 170419

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 76     agctgcaacaaggaaacagctcag 99
              |||| |||||||||||||||||||
Sbjct: 166394 agctccaacaaggaaacagctcag 166417
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>gb|AC010908.3| Homo sapiens BAC clone CTD-3073A19 from 7, complete sequence
          Length = 127989

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 76     agctgcaacaaggaaacagctcag 99
              |||| |||||||||||||||||||
Sbjct: 119404 agctccaacaaggaaacagctcag 119427
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>emb|CR749176.14| Zebrafish DNA sequence from clone DKEY-43B13 in linkage group 19,
            complete sequence
          Length = 237649

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 130  ataaacatacagaacattaaacag 153
            |||||||| |||||||||||||||
Sbjct: 2533 ataaacattcagaacattaaacag 2556
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>emb|AL356356.17| Human DNA sequence from clone RP11-54A4 on chromosome 1 Contains the 3'
              end of the gene for a novel protein (KIAA0460), the gene
              for threonyl-tRNA synthetase (FLJ12528), the ECM1 gene for
              extracellular matrix protein 1, the TSRC1 gene for
              thrombospondin repeat containing 1, two novel genes, the
              MCL1 gene for myeloid cell leukemia sequence 1
              (BCL2-related), the ENSA gene for endosulfine alpha, the 3'
              end of the gene for GPP34-related protein (GPP34R) and two
              CpG islands, complete sequence
          Length = 176550

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      acaaaacatacatatttcat 20
              ||||||||||||||||||||
Sbjct: 166528 acaaaacatacatatttcat 166547
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>gb|AC097257.7| Rattus norvegicus X BAC CH230-180I13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 196137

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   caactgccacataaacatacagaa 143
             ||||||||||||||| ||||||||
Sbjct: 48073 caactgccacataaaaatacagaa 48096
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>emb|AL928829.6| Mouse DNA sequence from clone RP23-390B17 on chromosome 2, complete
             sequence
          Length = 162437

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   acataaacatacagaacatt 147
             ||||||||||||||||||||
Sbjct: 86800 acataaacatacagaacatt 86781
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>gb|AC133094.4| Mus musculus BAC clone RP23-479K21 from 8, complete sequence
          Length = 183826

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      atacatatttcattctcagg 27
              ||||||||||||||||||||
Sbjct: 103447 atacatatttcattctcagg 103428
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>gb|AC145448.3| Dasypus novemcinctus clone VMRC5-267J9, complete sequence
          Length = 149428

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 132   aaacatacagaacattaaacagg 154
             ||||||||| |||||||||||||
Sbjct: 29015 aaacatacataacattaaacagg 29037
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>gb|BC056081.1| Xenopus laevis plasma membrane protein 1B3, mRNA (cDNA clone
            MGC:69072 IMAGE:4968704), complete cds
          Length = 1842

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 78   ctgcaacaaggaaacagct 96
            |||||||||||||||||||
Sbjct: 1602 ctgcaacaaggaaacagct 1584
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>gb|U23512.1| Caenorhabditis elegans cosmid M01G4, complete sequence
          Length = 38415

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     aaaacatacatatttcatt 21
             |||||||||||||||||||
Sbjct: 34197 aaaacatacatatttcatt 34215
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>gb|AC104844.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0030L19, complete sequence
          Length = 128848

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    acaaacatgtaaaggcaaa 58
             |||||||||||||||||||
Sbjct: 55164 acaaacatgtaaaggcaaa 55182
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>gb|AC016877.11| Homo sapiens chromosome 8, clone RP11-44N12, complete sequence
          Length = 188593

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 65     cagataaaagcagctgcaa 83
              |||||||||||||||||||
Sbjct: 138606 cagataaaagcagctgcaa 138588
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>gb|AC122843.2| Mus musculus BAC clone RP23-149L20 from 6, complete sequence
          Length = 207070

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     acaaaacatacatatttca 19
             |||||||||||||||||||
Sbjct: 31740 acaaaacatacatatttca 31722
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>gb|U00032.2| Caenorhabditis elegans cosmid F37A4, complete sequence
          Length = 50335

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 3    aaaacatacatatttcatt 21
            |||||||||||||||||||
Sbjct: 7482 aaaacatacatatttcatt 7500
to top
>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence
          Length = 190772

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 85     aaggaaacagctcaggaat 103
              |||||||||||||||||||
Sbjct: 124846 aaggaaacagctcaggaat 124864
to top
>emb|AL591485.7| Human DNA sequence from clone RP11-293C4 on chromosome 6, complete
             sequence
          Length = 178428

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    attctcagggctatggttc 37
             |||||||||||||||||||
Sbjct: 35397 attctcagggctatggttc 35379
to top
>gb|AC116533.11| Homo sapiens chromosome 11, clone RP11-466H18, complete sequence
          Length = 189143

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 55    caaacattaccagataaaa 73
             |||||||||||||||||||
Sbjct: 74946 caaacattaccagataaaa 74964
to top
>emb|AL354863.29| Human DNA sequence from clone RP11-245J24 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 46765

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 132   aaacatacagaacattaaa 150
             |||||||||||||||||||
Sbjct: 11026 aaacatacagaacattaaa 11008
to top
>emb|AL162585.15| Human DNA sequence from clone RP11-148I22 on chromosome 9, complete
             sequence
          Length = 44041

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    aaaggcaaacattaccaga 68
             |||||||||||||||||||
Sbjct: 11894 aaaggcaaacattaccaga 11912
to top
>emb|AL157380.15| Human DNA sequence from clone RP11-358K18 on chromosome Xq21.32-22.1,
             complete sequence
          Length = 132992

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    caaacatgtaaaggcaaac 59
             |||||||||||||||||||
Sbjct: 83474 caaacatgtaaaggcaaac 83456
to top
>emb|AL133331.27| Human DNA sequence from clone RP11-157E14 on chromosome 20 Contains the
             3' end of a novel gene, the 5' end of a novel gene, a
             novel gene and the 5' end of  the SPTLC2L gene for serine
             palmitoyltransferase long chain base subunit 2-like
             (aminotransferase 2), complete sequence
          Length = 85110

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 85    aaggaaacagctcaggaat 103
             |||||||||||||||||||
Sbjct: 42142 aaggaaacagctcaggaat 42160
to top
>gb|AC124653.5| Homo sapiens chromosome 11, clone RP11-100H14, complete sequence
          Length = 151313

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 126   ccacataaacatacagaac 144
             |||||||||||||||||||
Sbjct: 67031 ccacataaacatacagaac 67013
to top
>emb|Z28120.1|SCYKL120W S.cerevisiae chromosome XI reading frame ORF YKL120w
          Length = 1869

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 130  ataaacatacagaacatta 148
            |||||||||||||||||||
Sbjct: 1782 ataaacatacagaacatta 1800
to top
>gb|AY241925.1| Caenorhabditis elegans chondroitin disaccharide polymerase (sqv-5)
            gene, complete cds; alternatively spliced
          Length = 5584

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 73   agcagctgcaacaaggaaa 91
            |||||||||||||||||||
Sbjct: 2081 agcagctgcaacaaggaaa 2063
to top
>gb|AC021580.9| Homo sapiens chromosome 9, clone RP11-1091N2, complete sequence
          Length = 210557

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    aaaggcaaacattaccaga 68
             |||||||||||||||||||
Sbjct: 21573 aaaggcaaacattaccaga 21591
to top
>gb|AC104986.5| Homo sapiens chromosome 8, clone RP11-410L14, complete sequence
          Length = 153411

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 65    cagataaaagcagctgcaa 83
             |||||||||||||||||||
Sbjct: 90606 cagataaaagcagctgcaa 90624
to top
>gb|AC110057.3| Homo sapiens chromosome 11, clone CTD1-2361F20, complete sequence
          Length = 168473

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 126    ccacataaacatacagaac 144
              |||||||||||||||||||
Sbjct: 163523 ccacataaacatacagaac 163541
to top
>gb|AC097504.3| Homo sapiens BAC clone RP11-362F19 from 4, complete sequence
          Length = 186215

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 116   agatcaactgccacataaa 134
             |||||||||||||||||||
Sbjct: 42679 agatcaactgccacataaa 42697
to top
>gb|AF315583.1|AF315583 Acinetobacter calcoaceticus dTDP-D-glucose-4,6-dehydratase (rfbB),
            dTDP-rhamnose synthetase (rfbD), glucose-1-phosphate
            thymidylyltransferase (rfbA), and
            dTDP-6-deoxy-D-glucose-3,5-epimerase (rfbC) genes,
            complete cds
          Length = 3896

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 54   gcaaacattaccagataaaagca 76
            |||||||||| ||||||||||||
Sbjct: 1866 gcaaacattaacagataaaagca 1888
to top
>emb|BX324143.9| Zebrafish DNA sequence from clone CH211-197D1 in linkage group 3,
             complete sequence
          Length = 105743

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 118   atcaactgccacataaaca 136
             |||||||||||||||||||
Sbjct: 69771 atcaactgccacataaaca 69789
to top
>gb|S44213.1| YKL522=mitochondrial ADP/ATP carrier protein homolog...YKL527=H1
           histone homolog  [Saccharomyces cerevisiae, Genomic, 5
           genes, 8294 nt]
          Length = 8294

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 130 ataaacatacagaacatta 148
           |||||||||||||||||||
Sbjct: 523 ataaacatacagaacatta 505
to top
>gb|AC123427.5| Rattus norvegicus 2 BAC CH230-523K1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 200687

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 82     aacaaggaaacagctcaggaatc 104
              ||||||||||||| |||||||||
Sbjct: 178975 aacaaggaaacagatcaggaatc 178953
to top
>gb|AC120670.8| Rattus norvegicus 2 BAC CH230-23N23 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 228097

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 82     aacaaggaaacagctcaggaatc 104
              ||||||||||||| |||||||||
Sbjct: 115766 aacaaggaaacagatcaggaatc 115788
to top
>dbj|AK082622.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230070L18
            product:unclassifiable, full insert sequence
          Length = 2901

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 1    acaaaacatacatatttca 19
            |||||||||||||||||||
Sbjct: 2225 acaaaacatacatatttca 2207
to top
>gb|AC151305.2| Xenopus tropicalis clone CH216-36A20, complete sequence
          Length = 72789

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    aacattaccagataaaagc 75
             |||||||||||||||||||
Sbjct: 63304 aacattaccagataaaagc 63322
to top
>gb|AC156505.6| Mus musculus 10 BAC RP24-270N22 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 190789

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     aaaacatacatatttcatt 21
             |||||||||||||||||||
Sbjct: 10173 aaaacatacatatttcatt 10155
to top
>gb|AC124029.15| Mus musculus chromosome 1, clone RP23-238E7, complete sequence
          Length = 204904

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 135    catacagaacattaaacag 153
              |||||||||||||||||||
Sbjct: 160943 catacagaacattaaacag 160925
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 40       acaaacatgtaaaggcaaa 58
                |||||||||||||||||||
Sbjct: 23185979 acaaacatgtaaaggcaaa 23185997
to top
>gb|AC016762.5| Homo sapiens BAC clone RP11-540F24 from 2, complete sequence
          Length = 42886

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 140  agaacattaaacaggtatcatat 162
            |||| ||||||||||||||||||
Sbjct: 5897 agaaaattaaacaggtatcatat 5875
to top
>gb|AC145938.4| Pan troglodytes BAC clone RP43-18H20 from chromosome 7, complete
             sequence
          Length = 178210

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 130   ataaacatacagaacatta 148
             |||||||||||||||||||
Sbjct: 84942 ataaacatacagaacatta 84960
to top
>gb|AC015987.6| Homo sapiens chromosome 7 clone RP11-207O19, complete sequence
          Length = 181882

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 130    ataaacatacagaacatta 148
              |||||||||||||||||||
Sbjct: 117202 ataaacatacagaacatta 117220
to top
>gb|AC010533.6|AC010533 Homo sapiens chromosome 16 clone RP11-229O3, complete sequence
          Length = 153588

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 132   aaacatacagaacattaaa 150
             |||||||||||||||||||
Sbjct: 66099 aaacatacagaacattaaa 66117
to top
>gb|AC107419.3| Homo sapiens X BAC RP11-241K4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 151900

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     atacatatttcattctcag 26
             |||||||||||||||||||
Sbjct: 74334 atacatatttcattctcag 74352
to top
>gb|AC129501.3| Homo sapiens chromosome 11, clone RP11-1095K7, complete sequence
          Length = 179540

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 126   ccacataaacatacagaac 144
             |||||||||||||||||||
Sbjct: 67055 ccacataaacatacagaac 67037
to top
>gb|AC024083.3|AC024083 Homo sapiens chromosome 7 clone RP11-24I23, complete sequence
          Length = 152283

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 130   ataaacatacagaacatta 148
             |||||||||||||||||||
Sbjct: 18884 ataaacatacagaacatta 18902
to top
>gb|AC135893.2| Homo sapiens 3 BAC RP11-643E20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165735

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 132    aaacatacagaacattaaa 150
              |||||||||||||||||||
Sbjct: 105017 aaacatacagaacattaaa 104999
to top
>gb|AC153975.4| Mus musculus 10 BAC RP24-186L12 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 145072

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     aaaacatacatatttcatt 21
             |||||||||||||||||||
Sbjct: 36187 aaaacatacatatttcatt 36205
to top
>dbj|AP006587.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-163O19, complete
              sequence
          Length = 172438

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 126    ccacataaacatacagaac 144
              |||||||||||||||||||
Sbjct: 119529 ccacataaacatacagaac 119511
to top
>emb|Z28118.1|SCYKL119C S.cerevisiae chromosome XI reading frame ORF YKL119c
          Length = 2005

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 130 ataaacatacagaacatta 148
           |||||||||||||||||||
Sbjct: 164 ataaacatacagaacatta 182
to top
>gb|AC006597.2|AC006597 Homo sapiens Chromosome 11p14.3 PAC clone pDJ292d23, complete sequence
          Length = 103306

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 55    caaacattaccagataaaa 73
             |||||||||||||||||||
Sbjct: 13336 caaacattaccagataaaa 13318
to top
>gb|AC103663.15| Mus musculus chromosome 1, clone RP23-219O12, complete sequence
          Length = 212662

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 135 catacagaacattaaacag 153
           |||||||||||||||||||
Sbjct: 356 catacagaacattaaacag 338
to top
>dbj|AP003477.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB2047A4
          Length = 179110

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 74     gcagctgcaacaaggaaac 92
              |||||||||||||||||||
Sbjct: 158495 gcagctgcaacaaggaaac 158513
to top
>dbj|AP005791.2| Homo sapiens genomic DNA, chromosome 8q22, clone: KB1357H4, complete
             sequence
          Length = 160208

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 74    gcagctgcaacaaggaaac 92
             |||||||||||||||||||
Sbjct: 79618 gcagctgcaacaaggaaac 79636
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 40       acaaacatgtaaaggcaaa 58
                |||||||||||||||||||
Sbjct: 23495889 acaaacatgtaaaggcaaa 23495907
to top
>gb|AC134435.3| Mus musculus BAC clone RP24-423J19 from 1, complete sequence
          Length = 225687

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     aaaacatacatatttcatt 21
             |||||||||||||||||||
Sbjct: 79956 aaaacatacatatttcatt 79938
to top
>gb|AC131685.4| Mus musculus BAC clone RP23-372G24 from 1, complete sequence
          Length = 163474

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     aaaacatacatatttcatt 21
             |||||||||||||||||||
Sbjct: 92366 aaaacatacatatttcatt 92348
to top
>gb|AC170088.9| Mus musculus  BAC RP23-94A1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 253441

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      acaaaacatacatatttca 19
              |||||||||||||||||||
Sbjct: 211821 acaaaacatacatatttca 211803
to top
>gb|U73642.1|U73642 Human Chromosome 11 Cosmid cSRL30h11, complete sequence
          Length = 41032

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 126   ccacataaacatacagaac 144
             |||||||||||||||||||
Sbjct: 34962 ccacataaacatacagaac 34944
to top
>emb|Z81131.2|CET24D1 Caenorhabditis elegans Cosmid T24D1, complete sequence
          Length = 19613

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 73   agcagctgcaacaaggaaa 91
            |||||||||||||||||||
Sbjct: 6546 agcagctgcaacaaggaaa 6528
to top
>gb|AC158644.13| Mus musculus 6 BAC RP23-479B14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 161541

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      acaaaacatacatatttca 19
              |||||||||||||||||||
Sbjct: 118955 acaaaacatacatatttca 118937
to top
>emb|AL627093.17| Mouse DNA sequence from clone RP23-450P8 on chromosome 4, complete
             sequence
          Length = 169621

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 84    caaggaaacagctcaggaa 102
             |||||||||||||||||||
Sbjct: 73151 caaggaaacagctcaggaa 73169
to top
>emb|AL845305.5| Mouse DNA sequence from clone RP23-202K13 on chromosome 2, complete
              sequence
          Length = 200141

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 49     taaaggcaaacattaccag 67
              |||||||||||||||||||
Sbjct: 186416 taaaggcaaacattaccag 186398
to top
>emb|AL669898.17| Mouse DNA sequence from clone RP23-6C3 on chromosome X, complete sequence
          Length = 220201

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 14     atttcattctcagggctatggtt 36
              |||||| ||||||||||||||||
Sbjct: 149694 atttcaatctcagggctatggtt 149672
to top
>gb|M93350.1|YSCVPH2A Saccharomyces cerevisiae integral membrane protein for ATPase
            activity (VPH2) gene, complete cds
          Length = 1210

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 130  ataaacatacagaacatta 148
            |||||||||||||||||||
Sbjct: 1004 ataaacatacagaacatta 986
to top
>gb|AC129484.8| Homo sapiens chromosome 11, clone RP13-337F11, complete sequence
          Length = 52805

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 126  ccacataaacatacagaac 144
            |||||||||||||||||||
Sbjct: 1568 ccacataaacatacagaac 1550
to top
>dbj|D11472.1|YSCVAATP Yeast VMA12 gene for a polypeptide required for vacuolar ATPase
            assembly, complete cds
          Length = 1213

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 130  ataaacatacagaacatta 148
            |||||||||||||||||||
Sbjct: 1007 ataaacatacagaacatta 989
to top
>dbj|AP003691.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1594B3, complete
              sequence
          Length = 157952

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 65     cagataaaagcagctgcaa 83
              |||||||||||||||||||
Sbjct: 140448 cagataaaagcagctgcaa 140430


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,755,263
Number of Sequences: 3902068
Number of extensions: 1755263
Number of successful extensions: 134832
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 134512
Number of HSP's gapped (non-prelim): 320
length of query: 162
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 140
effective length of database: 17,147,199,772
effective search space: 2400607968080
effective search space used: 2400607968080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top