Clone Name | rbastl47b11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PAR6G_HUMAN (Q9BYG4) Partitioning defective 6 homolog gamma (PAR... | 34 | 0.088 | 2 | KAP3_BOVIN (P31322) cAMP-dependent protein kinase type II-beta r... | 28 | 4.8 | 3 | FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 ... | 28 | 8.2 |
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>PAR6G_HUMAN (Q9BYG4) Partitioning defective 6 homolog gamma (PAR-6 gamma)| (PAR6D) Length = 376 Score = 34.3 bits (77), Expect = 0.088 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 9/77 (11%) Frame = +3 Query: 12 KPSSTESMYTTAKQQHHHDNDDRPLL-------LLILKHSTRLCEPTARSISP--RVFPE 164 KP E Y HH N D + LL + + C+ + S +P RVF + Sbjct: 38 KPGKFEDFYKLVVHTHHISNSDVTIGYADVHGDLLPINNDDNFCKAVS-SANPLLRVFIQ 96 Query: 165 ARSYSGRGCAGAGLLCR 215 R + RG GAG LCR Sbjct: 97 KREEAERGSLGAGSLCR 113
>KAP3_BOVIN (P31322) cAMP-dependent protein kinase type II-beta regulatory| subunit Length = 417 Score = 28.5 bits (62), Expect = 4.8 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +3 Query: 84 LLLLILKHSTRLCEPTARSISPRVFPEARSYSGRGCAGAG 203 LL L+H TRL E R + R E R++ G AG G Sbjct: 27 LLEFALQHFTRLQEENERKGTARFGHEGRTWGDAGAAGGG 66
>FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein| 7) (F-box protein FBW7) (F-box protein Fbxw6) (F-box-WD40 repeat protein 6) (SEL-10) Length = 629 Score = 27.7 bits (60), Expect = 8.2 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +2 Query: 164 SAVLFRPGLCWCWSSLPAFPLNSAP 238 S+VL +CWCW L PL + P Sbjct: 7 SSVLVLSCVCWCWGVLLPVPLPNLP 31 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,752,549 Number of Sequences: 219361 Number of extensions: 401220 Number of successful extensions: 1161 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1157 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1160 length of database: 80,573,946 effective HSP length: 56 effective length of database: 68,289,730 effective search space used: 1638953520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)