Clone Name | rbastl47b10 |
---|---|
Clone Library Name | barley_pub |
>gb|AC137065.26| Medicago truncatula clone mth2-29h7, complete sequence Length = 105004 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 aaatattagtcaacaatggtacaaa 60 |||||||||||||||||| |||||| Sbjct: 101295 aaatattagtcaacaatgttacaaa 101319
>gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ctttctcaatattgtcttcc 207 |||||||||||||||||||| Sbjct: 12002 ctttctcaatattgtcttcc 11983
>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence Length = 203478 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ctttctcaatattgtcttcc 207 |||||||||||||||||||| Sbjct: 195772 ctttctcaatattgtcttcc 195753
>emb|CR354427.7| Zebrafish DNA sequence from clone DKEY-263N17 in linkage group 18, complete sequence Length = 164758 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tgtttcaggctctctttctc 194 |||||||||||||||||||| Sbjct: 128434 tgtttcaggctctctttctc 128415
>gb|AC094099.3| Homo sapiens chromosome 5 clone RP11-153B10, complete sequence Length = 68440 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 tatgtttcaggctctctttc 192 |||||||||||||||||||| Sbjct: 64829 tatgtttcaggctctctttc 64810
>gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome 13, complete sequence Length = 204294 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 tacaaaatattagtcaacaa 51 |||||||||||||||||||| Sbjct: 131842 tacaaaatattagtcaacaa 131823
>gb|AC093528.3| Homo sapiens chromosome 5 clone RP11-297K24, complete sequence Length = 198167 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 tatgtttcaggctctctttc 192 |||||||||||||||||||| Sbjct: 2684 tatgtttcaggctctctttc 2665
>emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in linkage group 18, complete sequence Length = 145250 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tgtttcaggctctctttctc 194 |||||||||||||||||||| Sbjct: 91226 tgtttcaggctctctttctc 91207
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 acaaaatattagtcaacaat 52 |||||||||||||||||||| Sbjct: 2555987 acaaaatattagtcaacaat 2555968
>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete sequence Length = 172826 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 aaatattagtcaacaatggt 55 |||||||||||||||||||| Sbjct: 59691 aaatattagtcaacaatggt 59710 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,428,378 Number of Sequences: 3902068 Number of extensions: 2428378 Number of successful extensions: 38067 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 38045 Number of HSP's gapped (non-prelim): 22 length of query: 228 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 206 effective length of database: 17,147,199,772 effective search space: 3532323153032 effective search space used: 3532323153032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)