>gb|AY532593.1| Triticum aestivum minichromosomal maintenance factor (MCM2) gene,
            exons 1 through 18 and complete sequence
          Length = 8809

 Score =  204 bits (103), Expect = 2e-49
 Identities = 145/159 (91%)
 Strand = Plus / Minus

                                                                        
Query: 137  aacactgaattatgacatcaagaaggtacaaacatctctaaatgccactggaggcacaag 196
            ||||||||||||||| |||||||||||||| ||||||| ||||||| ||| |||||||||
Sbjct: 8241 aacactgaattatgatatcaagaaggtacagacatctcgaaatgccgctgtaggcacaag 8182

                                                                        
Query: 197  ggtttcagatagcaaacagtacaccaacaccagaattcccgtaaaacagacacgagcagt 256
            ||||||||||||||||||||||||||| | ||||| || |  ||||||||||| ||||||
Sbjct: 8181 ggtttcagatagcaaacagtacaccaatatcagaactctcacaaaacagacacaagcagt 8122

                                                   
Query: 257  cattttgccaacttacactacaagtggacattcctagct 295
            ||||||||| |||||||||||||||||||||| ||||||
Sbjct: 8121 cattttgccgacttacactacaagtggacatttctagct 8083



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                        
Query: 324  gctgaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcat 383
            ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
Sbjct: 8041 gctgatgttgattgagttgttatgctgcaactggatgcctgatgatcccacgcccttcgt 7982

                  
Query: 384  ccagga 389
            ||||||
Sbjct: 7981 ccagga 7976



 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 305  gctcttgaacaaagaggtagctg 327
            |||||||||||||||||||||||
Sbjct: 8085 gctcttgaacaaagaggtagctg 8063

>gb|AY532594.1| Triticum aestivum minichromosomal maintenance factor (MCM2) mRNA,
            complete cds
          Length = 2923

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                        
Query: 327  gaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcatcca 386
            ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||||| |
Sbjct: 2923 gaggtcgattgagttgttatgccgcaactggatgcctgatgatcccacgcccttcatcga 2864

               
Query: 387  gga 389
            |||
Sbjct: 2863 gga 2861

>gb|AY109731.1| Zea mays CL9169_1 mRNA sequence
          Length = 623

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 355 tggatgcttgatgatcccacgcccttcatccag 387
           ||||||| |||||||||||||||||||||||||
Sbjct: 178 tggatgcctgatgatcccacgcccttcatccag 210

>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence
          Length = 188853

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 315    aaagaggtagctgaggttgat 335
              |||||||||||||||||||||
Sbjct: 103298 aaagaggtagctgaggttgat 103318

>gb|AC142351.1| Pan troglodytes BAC clone RP43-21J15 from 7, complete sequence
          Length = 159635

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    aaacatctctaaatgccact 185
              ||||||||||||||||||||
Sbjct: 104407 aaacatctctaaatgccact 104388

>emb|AL365203.19| Human DNA sequence from clone RP11-479G22 on chromosome 10 Contains the
             3' end of a novel gene (FLJ13031) (FLJ40349), the ITGB1
             gene for integrin beta 1 (fibronectin receptor beta
             polypeptide antigen CD29 includes MDF2 MSK12), an
             adenylate kinase 3 like 1 (AK3L1) pseudogene, a novel
             gene, the 5' end of a novel gene, a NADH dehydrogenase
             subunit 4L (ND4L) pseudogene, a pseudogene similar to part
             of integrin beta 2 (antigen CD18 (p95) lymphocyte
             function-associated antigen 1; macrophage antigen 1
             (mac-1) beta subunit) (ITGB2) and a CpG island, complete
             sequence
          Length = 197973

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   ggaggcacaagggtttcaga 205
             ||||||||||||||||||||
Sbjct: 92711 ggaggcacaagggtttcaga 92692

>emb|BX323041.9| Zebrafish DNA sequence from clone RP71-82P7 in linkage group 7,
             complete sequence
          Length = 146935

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     gtaataaggaatttaattaa 20
             ||||||||||||||||||||
Sbjct: 99763 gtaataaggaatttaattaa 99782

>gb|AC103949.6| Homo sapiens chromosome 18, clone RP11-671P2, complete sequence
          Length = 177301

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    aaacatctctaaatgccact 185
              ||||||||||||||||||||
Sbjct: 117250 aaacatctctaaatgccact 117231

>gb|AC118563.1| Homo sapiens chromosome 5 clone CTD-2243F8, complete sequence
          Length = 105027

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     ttaattaaagtcattcatat 32
              ||||||||||||||||||||
Sbjct: 100831 ttaattaaagtcattcatat 100850

>gb|AC026839.7| Homo sapiens chromosome 5, clone RP11-186B13, complete sequence
          Length = 156721

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   aaacatctctaaatgccact 185
             ||||||||||||||||||||
Sbjct: 25257 aaacatctctaaatgccact 25276

>gb|AC008705.6| Homo sapiens chromosome 5 clone CTB-77H17, complete sequence
          Length = 159709

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    ttctgtttaaccaacagata 51
             ||||||||||||||||||||
Sbjct: 22346 ttctgtttaaccaacagata 22365

>gb|AC011369.4| Homo sapiens chromosome 5 clone CTB-105N12, complete sequence
          Length = 141529

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     ttctgtttaaccaacagata 51
              ||||||||||||||||||||
Sbjct: 120401 ttctgtttaaccaacagata 120420

>dbj|AP000040.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 11/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   tgctgctactggatgcttga 365
             ||||||||||||||||||||
Sbjct: 14249 tgctgctactggatgcttga 14268

>gb|AC010346.6|AC010346 Homo sapiens chromosome 5 clone CITB-H1_2018B2, complete sequence
          Length = 109626

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    ttaattaaagtcattcatat 32
             ||||||||||||||||||||
Sbjct: 56734 ttaattaaagtcattcatat 56753

>gb|AC090059.9| Homo sapiens 12 BAC RP11-604C20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 130125

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    ataatgattgtcccaaaagt 87
             ||||||||||||||||||||
Sbjct: 45587 ataatgattgtcccaaaagt 45606

>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete
             sequence
          Length = 192328

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   tgctgctactggatgcttga 365
             ||||||||||||||||||||
Sbjct: 50412 tgctgctactggatgcttga 50431

>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    tgctgctactggatgcttga 365
              ||||||||||||||||||||
Sbjct: 179399 tgctgctactggatgcttga 179418

>dbj|AB056778.1| Macaca fascicularis brain cDNA clone:QccE-21094, full insert
           sequence
          Length = 1550

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 311 gaacaaagaggtagctgagg 330
           ||||||||||||||||||||
Sbjct: 727 gaacaaagaggtagctgagg 746

>dbj|AP000281.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:T1588, complete sequence
          Length = 66129

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   tgctgctactggatgcttga 365
             ||||||||||||||||||||
Sbjct: 58308 tgctgctactggatgcttga 58327

>dbj|AP000184.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 11/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   tgctgctactggatgcttga 365
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244

>dbj|AP000108.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 11/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   tgctgctactggatgcttga 365
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,239,458
Number of Sequences: 3902068
Number of extensions: 3239458
Number of successful extensions: 60232
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60199
Number of HSP's gapped (non-prelim): 33
length of query: 389
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 367
effective length of database: 17,147,199,772
effective search space: 6293022316324
effective search space used: 6293022316324
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)