ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl47b05 |
|---|---|
| Clone Library Name | barley_pub |
>ARY2_MOUSE (P50295) Arylamine N-acetyltransferase 2 (EC 2.3.1.5) (Arylamide| acetylase 2) (N-acetyltransferase type 2) (NAT-2) Length = 290 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +2 Query: 227 AQQFCSEHGPFGVHCIVGTT 286 ++ FCS P GVHC+VG+T Sbjct: 219 SKSFCSLQTPEGVHCLVGST 238
>ARY2_MESAU (P50293) Arylamine N-acetyltransferase 2 (EC 2.3.1.5) (Arylamide| acetylase 2) (Arylamine N-acetyltransferase, polymorphic) (PNAT) (N-acetyltransferase type 2) (NAT-2) (AT-2) Length = 290 Score = 28.9 bits (63), Expect = 3.0 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +2 Query: 227 AQQFCSEHGPFGVHCIVGTT 286 ++ FCS P GVHC+VG T Sbjct: 219 SKSFCSLQTPEGVHCLVGCT 238
>E434_ADECT (P87568) Early E4 30 kDa protein| Length = 259 Score = 28.5 bits (62), Expect = 4.0 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = -1 Query: 291 WLVVPTMQCTPNGPCSLQNCWAW 223 WLV+ C+ CSL+NC W Sbjct: 177 WLVLKCKSCSLQNYCSLKNCAVW 199
>ARY1_HUMAN (P18440) Arylamine N-acetyltransferase 1 (EC 2.3.1.5) (Arylamide| acetylase 1) (Arylamine N-acetyltransferase, monomorphic) (MNAT) (N-acetyltransferase type 1) (NAT-1) Length = 290 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +2 Query: 227 AQQFCSEHGPFGVHCIVGTT 286 ++ FCS P GVHC+VG T Sbjct: 219 SKSFCSLQTPDGVHCLVGFT 238
>GUX1_HUMGT (P15828) Exoglucanase 1 precursor (EC 3.2.1.91) (Exoglucanase I)| (Exocellobiohydrolase I) (1,4-beta-cellobiohydrolase) (Beta-glucancellobiohydrolase) Length = 525 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 7/70 (10%) Frame = -1 Query: 357 RSACCATSEDFVGSSRCHKEPSWLVVPTMQCTPNGPC-------SLQNCWAWDINVSFAA 199 + AC T+E H SW +CT G C +L + W W VS + Sbjct: 19 QQACSLTTER-------HPSLSW-----NKCTAGGQCQTVQASITLDSNWRWTHQVSGST 66 Query: 198 SLYMGRKLET 169 + Y G K +T Sbjct: 67 NCYTGNKWDT 76
>IGA3_HAEIN (P45385) Immunoglobulin A1 protease precursor (EC 3.4.21.72) (IGA1| protease) Length = 1545 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/32 (40%), Positives = 22/32 (68%) Frame = -1 Query: 240 QNCWAWDINVSFAASLYMGRKLETYTRNLSTN 145 +N A +INV+ A+LY GR +E+ T N++ + Sbjct: 743 RNFKATNINVTNNATLYSGRNVESITSNITAS 774
>RNH_SALTY (P0A2B9) Ribonuclease HI (EC 3.1.26.4) (RNase HI) (Ribonuclease H)| (RNase H) Length = 155 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/56 (30%), Positives = 24/56 (42%) Frame = -2 Query: 338 HQKTL*AVVVATRNLPGLLFLQCSALQMVRVHCKIAGHGISMLVLQLVCIWGGNWK 171 H+KT T N L AL+ ++ HC++ S V Q + W NWK Sbjct: 31 HEKTFSEGYTLTTNNRMELMAAIVALEALKEHCEVTLSTDSQYVRQGITQWIHNWK 86
>RNH_SALTI (P0A2C0) Ribonuclease HI (EC 3.1.26.4) (RNase HI)| Length = 155 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/56 (30%), Positives = 24/56 (42%) Frame = -2 Query: 338 HQKTL*AVVVATRNLPGLLFLQCSALQMVRVHCKIAGHGISMLVLQLVCIWGGNWK 171 H+KT T N L AL+ ++ HC++ S V Q + W NWK Sbjct: 31 HEKTFSEGYTLTTNNRMELMAAIVALEALKEHCEVTLSTDSQYVRQGITQWIHNWK 86
>RNH_SALPA (Q5PFD8) Ribonuclease H (EC 3.1.26.4) (RNase H)| Length = 155 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/56 (30%), Positives = 24/56 (42%) Frame = -2 Query: 338 HQKTL*AVVVATRNLPGLLFLQCSALQMVRVHCKIAGHGISMLVLQLVCIWGGNWK 171 H+KT T N L AL+ ++ HC++ S V Q + W NWK Sbjct: 31 HEKTFSEGYTLTTNNRMELMAAIVALEALKEHCEVTLSTDSQYVRQGITQWIHNWK 86
>PSA72_DROME (Q24178) Proteasome subunit alpha type 7-1A (EC 3.4.25.1)| (Testis-specific proteasome 28 kDa subunit 1A) (Testis-specific alpha4-t1 proteasome subunit) Length = 249 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/49 (28%), Positives = 21/49 (42%) Frame = +2 Query: 239 CSEHGPFGVHCIVGTTSQEGSLWQRLLPTKSSDVAQQADLIYNSPTGIF 385 C+ PFG+ C++G +GS A L + P+GIF Sbjct: 123 CNGRRPFGISCLIGGIDADGS----------------ARLFHTEPSGIF 155
>OPSL_LIMPO (P35360) Lateral eye opsin| Length = 376 Score = 27.7 bits (60), Expect = 6.8 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%) Frame = -2 Query: 227 HGISMLVLQLVCIWGGNWKHIPVI*AQ--------TRVTTDAMSKDYLYLNFDA*YYVLY 72 H + L+L V IW G W +P T T D ++KD+ A Y V+Y Sbjct: 160 HKKATLLLLFVWIWSGGWTILPFFGWSRYVPEGNLTSCTVDYLTKDW----SSASYVVIY 215 Query: 71 SLKSY 57 L Y Sbjct: 216 GLAVY 220
>CAN10_RAT (Q9ES66) Calpain-10 (EC 3.4.22.-) (Calcium-activated neutral| proteinase 10) (CANP 10) Length = 666 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/47 (29%), Positives = 20/47 (42%) Frame = +2 Query: 248 HGPFGVHCIVGTTSQEGSLWQRLLPTKSSDVAQQADLIYNSPTGIFW 388 H P+G C G + G W ++ P K S++ Q G FW Sbjct: 262 HNPWGRRCWQGLWREGGEGWNQVEPAKESELLAQLQ------EGEFW 302
>CAN10_MOUSE (Q9ESK3) Calpain-10 (EC 3.4.22.-) (Calcium-activated neutral| proteinase 10) (CANP 10) Length = 666 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/47 (29%), Positives = 20/47 (42%) Frame = +2 Query: 248 HGPFGVHCIVGTTSQEGSLWQRLLPTKSSDVAQQADLIYNSPTGIFW 388 H P+G C G + G W ++ P K S++ Q G FW Sbjct: 262 HNPWGRRCWQGLWREGGEGWNQVEPAKESELLAQLQ------EGEFW 302
>TLP1_CASSA (Q9SMH2) Thaumatin-like protein 1 precursor| Length = 243 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +1 Query: 196 TSCKTNIDIPCPAILQ*TRTIWSALHCRN 282 TSC+ N++ CPA LQ + S L C++ Sbjct: 151 TSCRANVNAVCPAELQVKGSDASVLACKS 179
>OPSO_LIMPO (P35361) Ocellar opsin| Length = 376 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 8/65 (12%) Frame = -2 Query: 227 HGISMLVLQLVCIWGGNWKHIPVI*AQ--------TRVTTDAMSKDYLYLNFDA*YYVLY 72 H + L+L V IW G W +P T T D ++KD+ A Y ++Y Sbjct: 160 HKKATLLLLFVWIWSGGWTILPFFGWSRYVPEGNLTSCTVDYLTKDW----SSASYVIIY 215 Query: 71 SLKSY 57 L Y Sbjct: 216 GLAVY 220
>VWF_HUMAN (P04275) Von Willebrand factor precursor (vWF) [Contains: Von| Willebrand antigen II] Length = 2813 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 5/44 (11%) Frame = -1 Query: 348 CC-----ATSEDFVGSSRCHKEPSWLVVPTMQCTPNGPCSLQNC 232 CC + E GS R + SW V + +P PC + C Sbjct: 2490 CCGRCLPSACEVVTGSPRGDSQSSWKSVGSQWASPENPCLINEC 2533
>PYRC_BUCAI (P57416) Dihydroorotase (EC 3.5.2.3) (DHOase)| Length = 350 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +2 Query: 173 SSFLPIYKLAAKLTLISHAQQFCSEHGP 256 SS L K+ ++ + + Q FCSE+GP Sbjct: 275 SSLLSYVKVFEEMRALKYLQSFCSENGP 302
>ADRL_CAEEL (Q94177) ADIPOR-like receptor C43G2.1| Length = 434 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/31 (32%), Positives = 19/31 (61%) Frame = -2 Query: 278 LQCSALQMVRVHCKIAGHGISMLVLQLVCIW 186 L C ++ +V++ CK+ GIS+L++ W Sbjct: 257 LSCHSVNVVKIFCKLDYMGISLLIIGSFIPW 287
>MUTL_ECO57 (Q8XDN4) DNA mismatch repair protein mutL| Length = 615 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 Query: 397 NVIPENACWAVVN*VCLLCYIRRLCRQ 317 N++ ENA W++ + LL + RLC Q Sbjct: 564 NLMSENAQWSMAQAITLLADVERLCPQ 590 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,268,508 Number of Sequences: 219361 Number of extensions: 1173032 Number of successful extensions: 2327 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 2269 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2327 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
