Clone Name | rbastl47b03 |
---|---|
Clone Library Name | barley_pub |
>ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Receiver-like| protein 5) Length = 664 Score = 30.4 bits (67), Expect = 1.1 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%) Frame = +1 Query: 85 HISFNSFQ*VGYNSNLPTSSTPIASPKGILGRNFDILPVA-SYRSGFTCQDESYF*NNKI 261 H FN+F ++LP SS P+AS GI +PV+ SY+ D + Sbjct: 453 HSVFNNFP-----ADLPRSSFPLASAPGI------SVPVSVSYQEEVNSSDAKGGSSAAT 501 Query: 262 GDTGNPNLQLFNEHTPIVPQNRQN 333 GNP+ +FN+ PQ++Q+ Sbjct: 502 AGFGNPSYDIFND----FPQHQQH 521
>LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like protein 3)| Length = 470 Score = 30.0 bits (66), Expect = 1.5 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -3 Query: 80 TSTKLGNLFWGGGNMYFSSFKEYSN 6 T TKL N FW GG++Y + F SN Sbjct: 32 TKTKLSNFFWHGGSVYDAWFSCASN 56
>SACB_ACEDI (Q43998) Levansucrase precursor (EC 2.4.1.10)| (Beta-D-fructofuranosyl transferase) (Sucrose 6-fructosyl transferase) Length = 584 Score = 27.7 bits (60), Expect = 7.3 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 7/86 (8%) Frame = +1 Query: 46 PPQNKLPNFVLVHHISFNSFQ*VGYNSNLPTSSTPIASPKGILGRNFDILPVASYRSGFT 225 PPQ + + H FN G+ T+ TP+ P G+L +N ++R FT Sbjct: 258 PPQAIITQTLGRIHADFNHVWFTGF-----TAHTPLLQPDGVLYQNGAQNEFFNFRDPFT 312 Query: 226 CQDESY-------F*NNKIGDTGNPN 282 +D + F N G G N Sbjct: 313 FEDPKHPGVNYMVFEGNTAGQRGVAN 338
>ZN592_HUMAN (Q92610) Zinc finger protein 592| Length = 1267 Score = 27.7 bits (60), Expect = 7.3 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 6/57 (10%) Frame = -1 Query: 259 SCCFKSRIHLGK*ILTCSWLQVVCRSSF------RGCLLGSLLVWMRLVNCYCIQLT 107 S C RIH K C V+CRS++ CL + V R ++C + LT Sbjct: 754 SFCAHQRIHAHKSPYCCPECGVLCRSAYFQTHVKENCLHYARKVGYRCIHCGVVHLT 810
>ZN592_MOUSE (Q8BHZ4) Zinc finger protein 592 (Zfp-592)| Length = 1262 Score = 27.7 bits (60), Expect = 7.3 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 6/57 (10%) Frame = -1 Query: 259 SCCFKSRIHLGK*ILTCSWLQVVCRSSF------RGCLLGSLLVWMRLVNCYCIQLT 107 S C R+H K C V+CRS++ CL + V R ++C I LT Sbjct: 754 SFCAHQRVHAHKSPYCCPECGVLCRSAYFQTHVKENCLHYARKVGYRCIHCGVIHLT 810
>NAGPA_MOUSE (Q8BJ48) N-acetylglucosamine-1-phosphodiester| alpha-N-acetylglucosaminidase precursor (EC 3.1.4.45) (Phosphodiester alpha-GlcNAcase) (Mannose 6-phosphate-uncovering enzyme) Length = 517 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -3 Query: 200 TGSMSKFLPRMPFGLAIGVDEVGKLLLY 117 TGS SKF+ M A+G D G+L+L+ Sbjct: 228 TGSFSKFVNVMSARTAVGHDREGQLILF 255
>SYG_TREPA (O83678) Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine--tRNA| ligase) (GlyRS) Length = 462 Score = 27.3 bits (59), Expect = 9.5 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = -2 Query: 180 PSEDAFWARYWCG*GW 133 P+ED W YWC W Sbjct: 201 PAEDTHWFEYWCAQRW 216 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,395,641 Number of Sequences: 219361 Number of extensions: 1099208 Number of successful extensions: 1980 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1961 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1980 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)