Clone Name | rbastl47b03 |
---|---|
Clone Library Name | barley_pub |
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 41 tccctccgccccaaaataagttacccaactttgtacta 78 |||||||| |||||||||||| || ||||||||||||| Sbjct: 81481 tccctccgtcccaaaataagtgactcaactttgtacta 81518
>gb|AC020728.4|AC020728 Homo sapiens BAC clone RP11-506H20 from 5, complete sequence Length = 201404 Score = 48.1 bits (24), Expect = 0.019 Identities = 27/28 (96%) Strand = Plus / Plus Query: 225 ttgccaagatgaatcctacttttaaaac 252 |||||||||||| ||||||||||||||| Sbjct: 146381 ttgccaagatgactcctacttttaaaac 146408
>gb|AY821703.1| Henrardia persica beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1460 Score = 46.1 bits (23), Expect = 0.075 Identities = 38/43 (88%) Strand = Plus / Plus Query: 36 catattccctccgccccaaaataagttacccaactttgtacta 78 |||| |||||||| |||||||||||| || ||||||| ||||| Sbjct: 1191 catactccctccgtcccaaaataagtgactcaactttatacta 1233 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 41 tccctccgccccaaaataagttacccaacttt 72 |||||||| |||||||||||| || ||||||| Sbjct: 1264 tccctccgtcccaaaataagtgactcaacttt 1233
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 46.1 bits (23), Expect = 0.075 Identities = 26/27 (96%) Strand = Plus / Plus Query: 35 acatattccctccgccccaaaataagt 61 |||||||||||||| |||||||||||| Sbjct: 109679 acatattccctccgtcccaaaataagt 109705
>gb|AY242058.1| Oryza sativa (japonica cultivar-group) MONOCULM 1 (MOC1) gene, complete cds Length = 3176 Score = 46.1 bits (23), Expect = 0.075 Identities = 29/31 (93%) Strand = Plus / Plus Query: 31 aaatacatattccctccgccccaaaataagt 61 ||||||||| ||||||||||| ||||||||| Sbjct: 460 aaatacatactccctccgccctaaaataagt 490
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.075 Identities = 26/27 (96%) Strand = Plus / Plus Query: 35 acatattccctccgccccaaaataagt 61 |||||||||||||| |||||||||||| Sbjct: 26333102 acatattccctccgtcccaaaataagt 26333128 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 31 aaatacatattccctccgccccaaaata 58 ||||| |||||||||||| ||||||||| Sbjct: 25385058 aaatatatattccctccgtcccaaaata 25385031 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tgtactagtacatcatatca 91 |||||||||||||||||||| Sbjct: 20697706 tgtactagtacatcatatca 20697725
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.075 Identities = 29/31 (93%) Strand = Plus / Plus Query: 31 aaatacatattccctccgccccaaaataagt 61 ||||||||| ||||||||||| ||||||||| Sbjct: 23930330 aaatacatactccctccgccctaaaataagt 23930360 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 tattccctccgccccaaaataagt 61 ||||||||||| |||||||||||| Sbjct: 26080886 tattccctccgtcccaaaataagt 26080863
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 46.1 bits (23), Expect = 0.075 Identities = 29/31 (93%) Strand = Plus / Plus Query: 31 aaatacatattccctccgccccaaaataagt 61 ||||||||| ||||||||||| ||||||||| Sbjct: 59941 aaatacatactccctccgccctaaaataagt 59971
>gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene, partial cds; seed globulin (Glo-2) gene, complete cds; HMW-glutenin (Glu-Dty) gene, Glu-Dty-T2 allele, complete cds; and HMW-glutenin (HMW) gene, HMW-Dtx2 allele, complete cds Length = 102842 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 41 tccctccgccccaaaataagttacccaactttgtacta 78 |||||| | |||||||||||| || ||||||||||||| Sbjct: 66244 tccctctgtcccaaaataagtgactcaactttgtacta 66281
>emb|AL138836.15| Human DNA sequence from clone RP11-88M19 on chromosome 9 Contains the 5' end of the CDK5RAP2 gene for CDK5 regulatory subunit associated protein 2 (C48), the EGFL5 gene for EGF-like-domain, multiple 5 (MEGF9), an S-adenosylhomocysteine hydrolase (AHCY) pseudogene, the 3' end of a variant of the FBXW2 gene for F-box and WD-40 domain protein 2 (FBW2) and a CpG island, complete sequence Length = 188481 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 ttaccaacctcatccacaccaa 151 |||||||||||||||||||||| Sbjct: 151552 ttaccaacctcatccacaccaa 151573
>emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 48 Length = 194143 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tctttaaaagatgaaaaataca 37 |||||||||||||||||||||| Sbjct: 96721 tctttaaaagatgaaaaataca 96700
>emb|AL021713.1|ATT9A21 Arabidopsis thaliana DNA chromosome 4, BAC clone T9A21 (ESSA project) Length = 82697 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tctttaaaagatgaaaaataca 37 |||||||||||||||||||||| Sbjct: 68334 tctttaaaagatgaaaaataca 68313
>gb|AC093301.3| Homo sapiens chromosome 5 clone RP11-565F4, complete sequence Length = 178545 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 23 aagatgaaaaatacatattccc 44 |||||||||||||||||||||| Sbjct: 53043 aagatgaaaaatacatattccc 53064
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 tattccctccgccccaaaataa 59 |||||||||||||||||||||| Sbjct: 68640 tattccctccgccccaaaataa 68619
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 41 tccctccgccccaaaataagttacccaactttgtacta 78 |||||| | |||||||||||| || ||||||||||||| Sbjct: 108591 tccctctgtcccaaaataagtgactcaactttgtacta 108628
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 tattccctccgccccaaaataa 59 |||||||||||||||||||||| Sbjct: 11484647 tattccctccgccccaaaataa 11484626
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 tattccctccgccccaaaataa 59 |||||||||||||||||||||| Sbjct: 16272263 tattccctccgccccaaaataa 16272284 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 34 tacatattccctccgccccaaaataagt 61 |||||| |||||||| |||||||||||| Sbjct: 27659010 tacatactccctccgtcccaaaataagt 27659037 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 35 acatattccctccgccccaaaataagtt 62 ||||| |||||||| ||||||||||||| Sbjct: 26123648 acatactccctccgtcccaaaataagtt 26123621
>dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487H05 Length = 176057 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 tattccctccgccccaaaataa 59 |||||||||||||||||||||| Sbjct: 106750 tattccctccgccccaaaataa 106771
>gb|U29095.1|U29095 Triticum aestivum serine-threonine protein kinase (TaPK3) gene, exons 3 through 9 and complete cds Length = 2250 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Minus Query: 41 tccctccgccccaaaataagttacccaactttgtacta 78 |||||||| ||| |||||||| || ||||||||||||| Sbjct: 432 tccctccgtcccgaaataagtgactcaactttgtacta 395
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 tattccctccgccccaaaataa 59 |||||||||||||||||||||| Sbjct: 11491087 tattccctccgccccaaaataa 11491066
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 atattccctccgccccaaaataagt 61 |||||||||||| |||||||||||| Sbjct: 71207 atattccctccgtcccaaaataagt 71183
>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07, complete sequence Length = 114135 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 30 aaaatacatattccctccgccccaaaata 58 |||||||||||| |||||| ||||||||| Sbjct: 24803 aaaatacatatttcctccgtcccaaaata 24831
>gb|AC137001.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012L23, complete sequence Length = 121659 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 tattccctccgccccaaaata 58 ||||||||||||||||||||| Sbjct: 12146 tattccctccgccccaaaata 12166
>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055G24 map S20116S, complete sequence Length = 174210 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 tattccctccgccccaaaata 58 ||||||||||||||||||||| Sbjct: 124558 tattccctccgccccaaaata 124578
>gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1076_H08, complete sequence Length = 148348 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 tattccctccgccccaaaata 58 ||||||||||||||||||||| Sbjct: 106981 tattccctccgccccaaaata 107001
>gb|AC132486.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0473H02, complete sequence Length = 141027 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 30 aaaatacatattccctccgccccaaaata 58 |||||||||||| |||||| ||||||||| Sbjct: 140413 aaaatacatatttcctccgtcccaaaata 140441
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 atattccctccgccccaaaataagt 61 |||||||||||| |||||||||||| Sbjct: 2033784 atattccctccgtcccaaaataagt 2033760
>gb|AC034245.5| Homo sapiens chromosome 5 clone RP11-155L15, complete sequence Length = 158094 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 gatgaaaaatacatattccct 45 ||||||||||||||||||||| Sbjct: 14431 gatgaaaaatacatattccct 14411
>gb|AC008391.6| Homo sapiens chromosome 5 clone CTC-236F12, complete sequence Length = 147210 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 gatgaaaaatacatattccct 45 ||||||||||||||||||||| Sbjct: 139602 gatgaaaaatacatattccct 139582
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 tattccctccgccccaaaata 58 ||||||||||||||||||||| Sbjct: 3607421 tattccctccgccccaaaata 3607441
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 catattccctccgccccaaaataag 60 |||| |||||||||||||||||||| Sbjct: 28100557 catactccctccgccccaaaataag 28100581 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 tattccctccgccccaaaataagt 61 ||||||||||| |||||||||||| Sbjct: 19482616 tattccctccgtcccaaaataagt 19482639
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 tattccctccgccccaaaata 58 ||||||||||||||||||||| Sbjct: 7152132 tattccctccgccccaaaata 7152152 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 30 aaaatacatattccctccgccccaaaata 58 |||||||||||| |||||| ||||||||| Sbjct: 5818039 aaaatacatatttcctccgtcccaaaata 5818067
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 atattccctccgccccaaaataagt 61 |||||||||||| |||||||||||| Sbjct: 2033796 atattccctccgtcccaaaataagt 2033772
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 32 aatacatattccctccgccccaaaataag 60 |||||||| |||||||| ||||||||||| Sbjct: 23931271 aatacatactccctccgtcccaaaataag 23931243 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 36 catattccctccgccccaaaataagtta 63 |||| |||||||| |||||||||||||| Sbjct: 32553944 catactccctccgacccaaaataagtta 32553971 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 tattccctccgccccaaaataagt 61 ||||||||||| |||||||||||| Sbjct: 8483403 tattccctccgtcccaaaataagt 8483426
>gb|AC157484.2| Pan troglodytes BAC clone CH251-301F2 from chromosome unknown, complete sequence Length = 182330 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 gatgaaaaatacatattccct 45 ||||||||||||||||||||| Sbjct: 31015 gatgaaaaatacatattccct 31035
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 32 aatacatattccctccgccccaaaataag 60 |||||||| |||||||| ||||||||||| Sbjct: 77675 aatacatactccctccgtcccaaaataag 77647
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 32 aatacatattccctccgccccaaaataag 60 |||||||| |||||||| ||||||||||| Sbjct: 45793 aatacatactccctccgtcccaaaataag 45765
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 catattccctccgccccaaaataag 60 |||| |||||||||||||||||||| Sbjct: 83853 catactccctccgccccaaaataag 83877
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 tattccctccgccccaaaata 58 ||||||||||||||||||||| Sbjct: 3616125 tattccctccgccccaaaata 3616145
>dbj|D30809.1|WHTHPB1B Wheat gene for transcription factor HBP-1b(c38), partial cds Length = 6706 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 catattccctccgccccaaaataag 60 |||| |||||||||||||||||||| Sbjct: 4838 catactccctccgccccaaaataag 4862
>ref|XM_514594.1| PREDICTED: Pan troglodytes similar to Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) (LOC458190), mRNA Length = 2249 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 446 accaacctcatccacaccaa 465
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 tactatactctttaaaagat 27 |||||||||||||||||||| Sbjct: 1324485 tactatactctttaaaagat 1324466
>gb|BC010018.2| Homo sapiens S-adenosylhomocysteine hydrolase, mRNA (cDNA clone MGC:19639 IMAGE:2905378), complete cds Length = 2166 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 475 accaacctcatccacaccaa 494
>gb|AC145615.3| Homo sapiens BAC clone RP11-1217H2 from UL, complete sequence Length = 207889 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ttggatacaatagcaattta 132 |||||||||||||||||||| Sbjct: 175402 ttggatacaatagcaattta 175383
>gb|AC161295.3| Aotus nancymaae clone CH258-83B20, complete sequence Length = 151730 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 tactatactctttaaaagat 27 |||||||||||||||||||| Sbjct: 28752 tactatactctttaaaagat 28733
>gb|AC090890.3| Canis familiaris clone RP81-196D8, complete sequence Length = 175287 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctttaaaagatgaaaaata 35 |||||||||||||||||||| Sbjct: 167390 tctttaaaagatgaaaaata 167371
>gb|BC114924.1| Homo sapiens hypothetical protein FLJ20245, mRNA (cDNA clone MGC:134782 IMAGE:40025256), complete cds Length = 1335 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 195 accaacctcatccacaccaa 214
>emb|AL356299.16| Human DNA sequence from clone CTD-3216D2 on chromosome 20 Contains the AHCY gene encoding S-adenosylhomocysteine hydrolase, the 5' end of the ITCH gene for itchy homolog E3 ubiquitin protein ligase (mouse), the CDC42P1 gene for cell division cycle 42 pseudogene 1, a pseudogene similar to part of laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) and two CpG islands, complete sequence Length = 152334 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 21774 accaacctcatccacaccaa 21755
>emb|AL157711.12| Human DNA sequence from clone RP11-21M8 on chromosome 10 Contains part of the DOCK1 gene for dedicator of cyto-kinesis 1, complete sequence Length = 154818 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ccccaaaataagttacccaa 68 |||||||||||||||||||| Sbjct: 56020 ccccaaaataagttacccaa 56039
>gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, complete sequence Length = 186890 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ttggatacaatagcaattta 132 |||||||||||||||||||| Sbjct: 83796 ttggatacaatagcaattta 83777
>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence Length = 164577 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 31 aaatacatattccctccgccccaaaata 58 ||||| |||||||||||| ||||||||| Sbjct: 111616 aaatatatattccctccgtcccaaaata 111589
>gb|BT007625.1| Synthetic construct Homo sapiens S-adenosylhomocysteine hydrolase mRNA, partial cds Length = 1299 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 406 accaacctcatccacaccaa 425
>gb|BT006697.1| Homo sapiens S-adenosylhomocysteine hydrolase mRNA, complete cds Length = 1299 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 406 accaacctcatccacaccaa 425
>gb|AC073583.19| Homo sapiens Xp BAC RP11-483M24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179187 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 actctttaaaagatgaaaaa 33 |||||||||||||||||||| Sbjct: 52290 actctttaaaagatgaaaaa 52271
>dbj|AK097610.1| Homo sapiens cDNA FLJ40291 fis, clone TESTI2028384, highly similar to ADENOSYLHOMOCYSTEINASE (EC 3.3.1.1) Length = 2355 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 698 accaacctcatccacaccaa 717
>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0711E10 Length = 157903 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 tattccctccgccccaaaataagt 61 ||||||||||| |||||||||||| Sbjct: 58556 tattccctccgtcccaaaataagt 58579
>gb|AC182397.3| Pan troglodytes BAC clone CH251-345O12 from chromosome 16, complete sequence Length = 158303 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ttggatacaatagcaattta 132 |||||||||||||||||||| Sbjct: 124787 ttggatacaatagcaattta 124768
>emb|CR603449.1| full-length cDNA clone CS0DG007YH14 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1646 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 10 accaacctcatccacaccaa 29
>emb|CR594678.1| full-length cDNA clone CS0DL004YE09 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2111 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 484 accaacctcatccacaccaa 503
>gb|AC007028.3| Homo sapiens chromosome 16 clone RP5-835P2, complete sequence Length = 148807 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ttggatacaatagcaattta 132 |||||||||||||||||||| Sbjct: 125306 ttggatacaatagcaattta 125325
>ref|NM_000687.1| Homo sapiens S-adenosylhomocysteine hydrolase (AHCY), mRNA Length = 2110 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 453 accaacctcatccacaccaa 472
>dbj|AB169648.1| Macaca fascicularis brain cDNA, clone: QccE-12261, similar to human S-adenosylhomocysteine hydrolase (AHCY), mRNA, RefSeq: NM_000687.1 Length = 2165 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 491 accaacctcatccacaccaa 510
>gb|BC105194.1| Bos taurus S-adenosylhomocysteine hydrolase, mRNA (cDNA clone MGC:128223 IMAGE:7948966), complete cds Length = 2140 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 497 accaacctcatccacaccaa 516
>gb|AC146885.3| Callithrix jacchus clone CH259-349L5, complete sequence Length = 213940 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 tactatactctttaaaagat 27 |||||||||||||||||||| Sbjct: 169577 tactatactctttaaaagat 169558
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 31 aaatacatattccctccgccccaaaata 58 |||||||||||||||||| |||| |||| Sbjct: 21156963 aaatacatattccctccgtcccataata 21156990 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 34 tacatattccctccgccccaaaataagt 61 |||||| |||||||| |||||||||||| Sbjct: 14410723 tacatactccctccgtcccaaaataagt 14410696
>gb|AC141248.2| Homo sapiens chromosome 16 clone RP11-1251B5, complete sequence Length = 173206 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ttggatacaatagcaattta 132 |||||||||||||||||||| Sbjct: 23499 ttggatacaatagcaattta 23480
>gb|AC140890.2| Homo sapiens chromosome 16 clone RP11-188D24, complete sequence Length = 172153 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ttggatacaatagcaattta 132 |||||||||||||||||||| Sbjct: 126680 ttggatacaatagcaattta 126661
>gb|AC004902.2|AC004902 Homo sapiens PAC clone RP5-823F17 from 7q36, complete sequence Length = 104154 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ttggatacaatagcaattta 132 |||||||||||||||||||| Sbjct: 63676 ttggatacaatagcaattta 63695
>gb|AC013734.4|AC013734 Homo sapiens BAC clone RP11-557B9 from Y, complete sequence Length = 180019 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ttggatacaatagcaattta 132 |||||||||||||||||||| Sbjct: 85164 ttggatacaatagcaattta 85183
>gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, complete sequence Length = 193708 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ttggatacaatagcaattta 132 |||||||||||||||||||| Sbjct: 94396 ttggatacaatagcaattta 94377
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 36 catattccctccgccccaaaataagtta 63 |||| |||||||| |||||||||||||| Sbjct: 16739 catactccctccgacccaaaataagtta 16766
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 36 catattccctccgccccaaaataagtta 63 |||| |||||||| |||||||||||||| Sbjct: 141465 catactccctccgacccaaaataagtta 141492
>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0705D01 Length = 147174 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 tattccctccgccccaaaataagt 61 ||||||||||| |||||||||||| Sbjct: 98358 tattccctccgtcccaaaataagt 98381
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 34 tacatattccctccgccccaaaataagt 61 |||||| |||||||| |||||||||||| Sbjct: 138679 tacatactccctccgtcccaaaataagt 138706
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02 Length = 151636 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 tattccctccgccccaaaataagt 61 ||||||||||| |||||||||||| Sbjct: 60131 tattccctccgtcccaaaataagt 60108
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0580A11 Length = 174673 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 tattccctccgccccaaaataagt 61 ||||||||||| |||||||||||| Sbjct: 25960 tattccctccgtcccaaaataagt 25983
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 34 tacatattccctccgccccaaaataagt 61 |||||| |||||||| |||||||||||| Sbjct: 44876 tacatactccctccgtcccaaaataagt 44903
>gb|AY892700.1| Synthetic construct Homo sapiens clone FLH024356.01L S-adenosylhomocysteine hydrolase (AHCY) mRNA, partial cds Length = 1299 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 406 accaacctcatccacaccaa 425
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 35 acatattccctccgccccaaaataagtt 62 ||||| |||||||| ||||||||||||| Sbjct: 20475 acatactccctccgtcccaaaataagtt 20448
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 35 acatattccctccgccccaaaataagtt 62 ||||| |||||||| ||||||||||||| Sbjct: 131094 acatactccctccgtcccaaaataagtt 131067
>gb|AY890211.1| Synthetic construct Homo sapiens clone FLH024359.01X S-adenosylhomocysteine hydrolase (AHCY) mRNA, complete cds Length = 1299 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 406 accaacctcatccacaccaa 425
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 31 aaatacatattccctccgccccaaaata 58 |||||||||||||||||| |||| |||| Sbjct: 128173 aaatacatattccctccgtcccataata 128200
>dbj|AP005490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049I01 Length = 140261 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 34 tacatattccctccgccccaaaataagt 61 |||||| |||||||| |||||||||||| Sbjct: 5591 tacatactccctccgtcccaaaataagt 5564
>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0670E08 Length = 133106 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 34 tacatattccctccgccccaaaataagt 61 |||||| |||||||| |||||||||||| Sbjct: 55006 tacatactccctccgtcccaaaataagt 54979
>gb|BC011606.2| Homo sapiens S-adenosylhomocysteine hydrolase, mRNA (cDNA clone MGC:2319 IMAGE:3139231), complete cds Length = 2174 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 480 accaacctcatccacaccaa 499
>dbj|AP000974.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-700A24, complete sequence Length = 94359 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 74780 accaacctcatccacaccaa 74799
>emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0108J11, complete sequence Length = 124629 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tgtactagtacatcatatca 91 |||||||||||||||||||| Sbjct: 43857 tgtactagtacatcatatca 43876
>ref|NM_001034315.1| Bos taurus S-adenosylhomocysteine hydrolase (AHCY), mRNA Length = 2140 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 497 accaacctcatccacaccaa 516
>gb|M61832.1|HUMAHCY2 Human S-adenosylhomocysteine hydrolase (AHCY) mRNA, complete cds Length = 2084 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 449 accaacctcatccacaccaa 468
>gb|M61831.1|HUMAHCY Human S-adenosylhomocysteine hydrolase (AHCY) mRNA, complete cds Length = 2211 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 accaacctcatccacaccaa 151 |||||||||||||||||||| Sbjct: 453 accaacctcatccacaccaa 472 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,332,840 Number of Sequences: 3902068 Number of extensions: 3332840 Number of successful extensions: 70620 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69652 Number of HSP's gapped (non-prelim): 968 length of query: 349 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 327 effective length of database: 17,147,199,772 effective search space: 5607134325444 effective search space used: 5607134325444 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)