>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 226   ggacacttggcatccagaaactccttgagcgtgcg 260
             |||||||||||||| ||||| ||||||||| ||||
Sbjct: 49932 ggacacttggcatcgagaaattccttgagcatgcg 49898

>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0079B22, from chromosome 3, complete sequence
          Length = 125217

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 226   ggacacttggcatccagaaactccttgagcgtgcg 260
             |||||||||||||| ||||| ||||||||| ||||
Sbjct: 75286 ggacacttggcatcgagaaattccttgagcatgcg 75320

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             complete sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 226   ggacacttggcatccagaaactccttgagcgtgcg 260
             |||||||||||||| ||||| ||||||||| ||||
Sbjct: 49932 ggacacttggcatcgagaaattccttgagcatgcg 49898

>dbj|AK121880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104L13, full
            insert sequence
          Length = 3178

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 226  ggacacttggcatccagaaactccttgagcgtgcg 260
            |||||||||||||| ||||| ||||||||| ||||
Sbjct: 3022 ggacacttggcatcgagaaattccttgagcatgcg 2988

>dbj|AK068556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H20, full
            insert sequence
          Length = 3118

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 226  ggacacttggcatccagaaactccttgagcgtgcg 260
            |||||||||||||| ||||| ||||||||| ||||
Sbjct: 3029 ggacacttggcatcgagaaattccttgagcatgcg 2995

>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 158    aactcctcttccaagacctca 178
              |||||||||||||||||||||
Sbjct: 780906 aactcctcttccaagacctca 780886

>ref|NM_123675.1| Arabidopsis thaliana RNA binding AT5G43090 mRNA, complete cds
          Length = 1584

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   aatcacatatttggcattgg 29
            ||||||||||||||||||||
Sbjct: 1020 aatcacatatttggcattgg 1001

>gb|AC164974.2| Pan troglodytes BAC clone CH251-565G22 from chromosome 4, complete
              sequence
          Length = 210224

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 189    ccagaacagtaaaagttgatgcta 212
              ||||||||||||||||||| ||||
Sbjct: 163426 ccagaacagtaaaagttgaggcta 163403

>gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome 8, complete sequence
          Length = 168940

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   ggacacttggcatccagaaa 245
             ||||||||||||||||||||
Sbjct: 32628 ggacacttggcatccagaaa 32647

>emb|BX571876.1|BACPHGLE1 Leptospira biflexa temperate bacteriophage LE1
          Length = 73623

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    ttggatttggatggaattca 45
             ||||||||||||||||||||
Sbjct: 26499 ttggatttggatggaattca 26480

>gb|AC107068.3| Homo sapiens BAC clone RP11-121C2 from 4, complete sequence
          Length = 181804

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 189   ccagaacagtaaaagttgatgcta 212
             ||||||||||||||||||| ||||
Sbjct: 19011 ccagaacagtaaaagttgaggcta 19034

>dbj|AB008267.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMG4
          Length = 79046

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    aatcacatatttggcattgg 29
             ||||||||||||||||||||
Sbjct: 42990 aatcacatatttggcattgg 42971


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,263,871
Number of Sequences: 3902068
Number of extensions: 2263871
Number of successful extensions: 38069
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38027
Number of HSP's gapped (non-prelim): 42
length of query: 287
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 265
effective length of database: 17,147,199,772
effective search space: 4544007939580
effective search space used: 4544007939580
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)