Clone Name | rbastl47a12 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ234648.1|HVU234648 Hordeum vulgare genomic DNA fragment; clone MWG0922.uni Length = 373 Score = 63.9 bits (32), Expect = 1e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 1 ggatttgaactaaattctttattcccaaggtcaagggtga 40 |||||||||||||| |||||| |||||||||||||||||| Sbjct: 334 ggatttgaactaaaatctttaatcccaaggtcaagggtga 373
>emb|CR589884.15| Zebrafish DNA sequence from clone CH211-206L14 in linkage group 13, complete sequence Length = 151480 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatgg 122 |||||||||||||||||||| Sbjct: 56577 gttttacaagtttaacatgg 56596
>gb|AC159712.7| Mus musculus BAC RP23-236J3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221910 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 tgaactaaattctttattcccaag 29 |||| ||||||||||||||||||| Sbjct: 80492 tgaaataaattctttattcccaag 80469
>emb|CR556723.6| Zebrafish DNA sequence from clone CH211-176K6 in linkage group 13, complete sequence Length = 86020 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatgg 122 |||||||||||||||||||| Sbjct: 24812 gttttacaagtttaacatgg 24793
>gb|AC130283.8| Mus musculus chromosome 15, clone RP23-136E18, complete sequence Length = 180660 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 ctttcctaagaatataaac 99 ||||||||||||||||||| Sbjct: 44463 ctttcctaagaatataaac 44445
>gb|AC167172.3| Mus musculus BAC clone RP23-166M7 from chromosome 3, complete sequence Length = 204419 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cagtgttttacaagtttaa 117 ||||||||||||||||||| Sbjct: 152783 cagtgttttacaagtttaa 152765
>ref|XM_960081.1| Neurospora crassa OR74A hypothetical protein (NCU00981.1) partial mRNA Length = 786 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 tattcccaaggtcaagggt 38 ||||||||||||||||||| Sbjct: 360 tattcccaaggtcaagggt 378
>ref|XM_325160.1| Neurospora crassa OR74A hypothetical protein (NCU00981.1) partial mRNA Length = 786 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 tattcccaaggtcaagggt 38 ||||||||||||||||||| Sbjct: 360 tattcccaaggtcaagggt 378
>gb|AC129576.11| Mus musculus chromosome 10, clone RP24-343D9, complete sequence Length = 136276 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 ttcccaaggtcaagggtga 40 ||||||||||||||||||| Sbjct: 85014 ttcccaaggtcaagggtga 84996
>gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, complete sequence Length = 225183 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 ctttcctaagaatataaac 99 ||||||||||||||||||| Sbjct: 86464 ctttcctaagaatataaac 86446
>emb|CR956647.7| Pig DNA sequence from clone CH242-38B5 on chromosome 4, complete sequence Length = 131053 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 gaatataaacagtgtttta 108 ||||||||||||||||||| Sbjct: 28729 gaatataaacagtgtttta 28747
>emb|CR627484.12| Zebrafish DNA sequence from clone CH211-281M7 in linkage group 16, complete sequence Length = 152450 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 9585 gttttacaagtttaacatg 9603
>emb|CR388060.19| Zebrafish DNA sequence from clone DKEY-208J8 in linkage group 16, complete sequence Length = 213586 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 132728 gttttacaagtttaacatg 132710
>emb|CR932377.17| Zebrafish DNA sequence from clone DKEY-238H15 in linkage group 13, complete sequence Length = 100320 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 48914 gttttacaagtttaacatg 48896
>emb|BX571728.14| Zebrafish DNA sequence from clone DKEY-210O7 in linkage group 6, complete sequence Length = 229059 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 173900 gttttacaagtttaacatg 173918
>emb|CR388033.7| Zebrafish DNA sequence from clone CH211-187G4 in linkage group 15, complete sequence Length = 37045 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 17132 gttttacaagtttaacatg 17114
>emb|CR376761.19| Zebrafish DNA sequence from clone DKEY-6F24 in linkage group 2, complete sequence Length = 231384 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 96852 gttttacaagtttaacatg 96834
>emb|CR394546.9| Zebrafish DNA sequence from clone CH211-212I14 in linkage group 16, complete sequence Length = 174132 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 126910 gttttacaagtttaacatg 126928
>emb|CR847884.6| Zebrafish DNA sequence from clone CH211-161H23 in linkage group 1, complete sequence Length = 157311 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 27088 gttttacaagtttaacatg 27106
>emb|CR318660.16| Zebrafish DNA sequence from clone CH211-149I8 in linkage group 21, complete sequence Length = 162045 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 111648 gttttacaagtttaacatg 111666
>emb|CR392025.7| Zebrafish DNA sequence from clone CH211-248P17 in linkage group 17, complete sequence Length = 158863 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 118217 gttttacaagtttaacatg 118199
>emb|BX855598.22| Zebrafish DNA sequence from clone DKEY-52J13 in linkage group 13, complete sequence Length = 209449 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 177078 gttttacaagtttaacatg 177096
>emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in linkage group 9, complete sequence Length = 235135 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 227721 gttttacaagtttaacatg 227703
>emb|BX927322.12| Zebrafish DNA sequence from clone CH211-101J8 in linkage group 21, complete sequence Length = 110730 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 24131 gttttacaagtttaacatg 24149
>emb|CR352233.9| Zebrafish DNA sequence from clone CH211-193J5 in linkage group 13, complete sequence Length = 149899 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 82183 gttttacaagtttaacatg 82201
>emb|CR383676.21| Zebrafish DNA sequence from clone CH211-276I12 in linkage group 14, complete sequence Length = 164241 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 158840 gttttacaagtttaacatg 158858
>gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosome 10, complete sequence Length = 205283 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 ttcccaaggtcaagggtga 40 ||||||||||||||||||| Sbjct: 188844 ttcccaaggtcaagggtga 188826
>emb|BX842629.1| Neurospora crassa DNA linkage group I BAC contig B20J13 Length = 126048 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 tattcccaaggtcaagggt 38 ||||||||||||||||||| Sbjct: 102512 tattcccaaggtcaagggt 102530
>gb|AY289003.1|AY289003S1 Danio rerio signal transducer and activator of transcription 5 (stat5) gene, exons 3 through 9 Length = 23285 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 6356 gttttacaagtttaacatg 6374
>emb|BX511272.9| Zebrafish DNA sequence from clone DKEY-276L13 in linkage group 6, complete sequence Length = 208912 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 28581 gttttacaagtttaacatg 28563
>emb|BX571978.13| Zebrafish DNA sequence from clone CH211-156B2 in linkage group 6, complete sequence Length = 100510 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 50722 gttttacaagtttaacatg 50740
>emb|BX511002.14| Zebrafish DNA sequence from clone DKEY-254G2 in linkage group 21, complete sequence Length = 152010 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 11525 gttttacaagtttaacatg 11507
>emb|CR391929.9| Zebrafish DNA sequence from clone DKEYP-86B5, complete sequence Length = 223724 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 80548 gttttacaagtttaacatg 80566
>emb|BX897733.8| Zebrafish DNA sequence from clone CH211-105D4 in linkage group 2, complete sequence Length = 115031 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 40962 gttttacaagtttaacatg 40944
>emb|CR854952.6| Zebrafish DNA sequence from clone CH211-106K4 in linkage group 16, complete sequence Length = 27425 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 13964 gttttacaagtttaacatg 13946
>emb|BX324125.5| Zebrafish DNA sequence from clone DKEY-185M11, complete sequence Length = 196525 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 171051 gttttacaagtttaacatg 171069
>emb|CR354591.13| Zebrafish DNA sequence from clone DKEY-18L4 in linkage group 24, complete sequence Length = 218314 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 105840 gttttacaagtttaacatg 105822
>emb|BX248332.14| Zebrafish DNA sequence from clone CH211-212O2 in linkage group 9, complete sequence Length = 237498 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 28822 gttttacaagtttaacatg 28840
>emb|BX936327.3| Zebrafish DNA sequence from clone DKEY-21E10 in linkage group 3, complete sequence Length = 105845 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 9901 gttttacaagtttaacatg 9883
>emb|BX571815.16| Zebrafish DNA sequence from clone DKEY-28G6 in linkage group 4 Contains four CpG islands, complete sequence Length = 105739 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 50922 gttttacaagtttaacatg 50940
>emb|AL772279.7| Zebrafish DNA sequence from clone CH211-191N13 in linkage group 7 Contains a putative novel gene, a novel retrotransposon and eight CpG islands, complete sequence Length = 146786 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 141194 gttttacaagtttaacatg 141176
>emb|AL935035.6| Zebrafish DNA sequence from clone CH211-180B22 in linkage group 20 Contains the 5' end of the gene for a novel protein similar to vertebrate meningioma expressed antigen 6 (coiled-coil proline-rich) (MGEA6), the gene for a novel protein similar to vertebrate melanoma inhibitory activity 2 (MIA2), the gene for a novel protein similar to mouse and human TATA box binding protein (TBP)-associated factor RNA polymerase I A 48kDa (TAF1A), the 3' end of the gene for a novel protein similar to vertebrate dual specificity phosphatase 10 (DUSP10) and four CpG islands, complete sequence Length = 151114 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 4753 gttttacaagtttaacatg 4771
>emb|AL845351.6| Zebrafish DNA sequence from clone DKEYP-44A9 in linkage group 20, complete sequence Length = 160701 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 78606 gttttacaagtttaacatg 78588
>emb|BX927222.8| Zebrafish DNA sequence from clone CH211-256M12 in linkage group 16, complete sequence Length = 154714 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 19923 gttttacaagtttaacatg 19941
>emb|BX004823.23| Zebrafish DNA sequence from clone DKEY-13A3 in linkage group 14, complete sequence Length = 197683 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 41865 gttttacaagtttaacatg 41847
>emb|BX571814.10| Zebrafish DNA sequence from clone XX-7A10 in linkage group 25, complete sequence Length = 87559 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 27719 gttttacaagtttaacatg 27737
>emb|CR318610.8| Zebrafish DNA sequence from clone CH211-14B14 in linkage group 5, complete sequence Length = 164564 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 61888 gttttacaagtttaacatg 61870
>emb|CR377227.7| Zebrafish DNA sequence from clone CH211-226F6 in linkage group 2, complete sequence Length = 63114 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 37530 gttttacaagtttaacatg 37512
>emb|BX677664.9| Zebrafish DNA sequence from clone DKEYP-122B11 in linkage group 2, complete sequence Length = 170975 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 147491 gttttacaagtttaacatg 147509
>emb|BX323544.4| Zebrafish DNA sequence from clone DKEY-175I15 in linkage group 7, complete sequence Length = 182033 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 23461 gttttacaagtttaacatg 23443
>emb|BX546460.6| Zebrafish DNA sequence from clone RP71-84C10, complete sequence Length = 143360 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 90782 gttttacaagtttaacatg 90764
>emb|BX323573.7| Zebrafish DNA sequence from clone DKEYP-98F5, complete sequence Length = 181694 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 105792 gttttacaagtttaacatg 105774
>emb|BX897670.7| Zebrafish DNA sequence from clone DKEY-117L15 in linkage group 8, complete sequence Length = 107559 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 65497 gttttacaagtttaacatg 65479
>emb|CR405690.6| Zebrafish DNA sequence from clone CH211-208M13 in linkage group 22, complete sequence Length = 195552 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 6639 gttttacaagtttaacatg 6657
>emb|BX682552.9| Zebrafish DNA sequence from clone DKEY-120C6 in linkage group 3, complete sequence Length = 228044 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 40649 gttttacaagtttaacatg 40667
>gb|AC087473.5| Homo sapiens chromosome 15, clone RP11-346D14, complete sequence Length = 119456 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 aactaaattctttattccc 26 ||||||||||||||||||| Sbjct: 95242 aactaaattctttattccc 95224
>gb|AC116343.2| Homo sapiens chromosome 5 clone RP11-207L6, complete sequence Length = 149195 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 gttcctttgaactaggtgt 75 ||||||||||||||||||| Sbjct: 12052 gttcctttgaactaggtgt 12070
>emb|BX842696.13| Zebrafish DNA sequence from clone DKEY-165P1 in linkage group 13, complete sequence Length = 216185 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 51206 gttttacaagtttaacatg 51224
>emb|BX296542.12| Zebrafish DNA sequence from clone CH211-278C10 in linkage group 9, complete sequence Length = 174884 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 123319 gttttacaagtttaacatg 123301
>emb|BX511230.4| Zebrafish DNA sequence from clone DKEY-14H23 in linkage group 17, complete sequence Length = 156048 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 105498 gttttacaagtttaacatg 105516
>emb|BX321896.13| Zebrafish DNA sequence from clone RP71-49B22 in linkage group 23, complete sequence Length = 165985 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 48592 gttttacaagtttaacatg 48574
>emb|BX294185.5| Zebrafish DNA sequence from clone CH211-232L14 in linkage group 24, complete sequence Length = 115427 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 26900 gttttacaagtttaacatg 26882
>emb|BX511000.12| Zebrafish DNA sequence from clone DKEY-217F4 in linkage group 2, complete sequence Length = 191671 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 56243 gttttacaagtttaacatg 56225
>emb|BX897687.7| Zebrafish DNA sequence from clone DKEY-151O8, complete sequence Length = 208227 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 aatataaacagtgttttac 109 ||||||||||||||||||| Sbjct: 76593 aatataaacagtgttttac 76575
>emb|BX120001.10| Zebrafish DNA sequence from clone CH211-217J8 in linkage group 16, complete sequence Length = 211279 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 91904 gttttacaagtttaacatg 91922
>dbj|AK033262.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030478N24 product:unclassifiable, full insert sequence Length = 1574 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 aaatatatgttcctttgaa 67 ||||||||||||||||||| Sbjct: 1229 aaatatatgttcctttgaa 1247
>emb|BX649596.8| Zebrafish DNA sequence from clone CH211-69P4 in linkage group 14, complete sequence Length = 181055 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 9128 gttttacaagtttaacatg 9146
>emb|BX255929.7| Zebrafish DNA sequence from clone CH211-271P5 in linkage group 14, complete sequence Length = 147460 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 99782 gttttacaagtttaacatg 99764
>emb|BX004818.16| Zebrafish DNA sequence from clone DKEY-64O12, complete sequence Length = 215899 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 162821 gttttacaagtttaacatg 162803
>emb|BX276117.5| Zebrafish DNA sequence from clone CH211-112K18 in linkage group 17, complete sequence Length = 181677 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 158561 gttttacaagtttaacatg 158543
>gb|AC136590.2| Homo sapiens chromosome 5 clone CTD-2312G21, complete sequence Length = 301479 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 gttcctttgaactaggtgt 75 ||||||||||||||||||| Sbjct: 130107 gttcctttgaactaggtgt 130125
>gb|AC137551.1| Homo sapiens chromosome 5 clone RP11-867C24, complete sequence Length = 183535 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 gttcctttgaactaggtgt 75 ||||||||||||||||||| Sbjct: 22298 gttcctttgaactaggtgt 22280
>emb|AL954172.9| Zebrafish DNA sequence from clone CH211-220D9 in linkage group 8, complete sequence Length = 201525 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 17187 gttttacaagtttaacatg 17169
>emb|BX649367.6| Zebrafish DNA sequence from clone CH211-133F22 in linkage group 20, complete sequence Length = 161289 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 57811 gttttacaagtttaacatg 57793
>emb|BX649385.8| Zebrafish DNA sequence from clone CH211-127M24 in linkage group 20, complete sequence Length = 165089 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 74997 gttttacaagtttaacatg 74979
>emb|AL772132.6| Zebrafish DNA sequence from clone CH211-196N11, complete sequence Length = 205802 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 59973 gttttacaagtttaacatg 59955
>emb|AL833789.20| Zebrafish DNA sequence from clone DKEY-69O7 in linkage group 12, complete sequence Length = 175664 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 11218 gttttacaagtttaacatg 11236
>emb|AL954146.8| Zebrafish DNA sequence from clone CH211-213I6 in linkage group 17, complete sequence Length = 207669 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 109296 gttttacaagtttaacatg 109314
>emb|CR848744.8| Zebrafish DNA sequence from clone DKEY-165G20 in linkage group 16, complete sequence Length = 246497 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 220207 gttttacaagtttaacatg 220189
>emb|BX936298.17| Zebrafish DNA sequence from clone DKEY-78L4 in linkage group 22, complete sequence Length = 234949 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 18789 gttttacaagtttaacatg 18807
>emb|BX649292.16| Zebrafish DNA sequence from clone DKEY-39E8 in linkage group 22, complete sequence Length = 181688 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 150565 gttttacaagtttaacatg 150583
>emb|BX649499.11| Zebrafish DNA sequence from clone DKEY-60A16 in linkage group 20, complete sequence Length = 201391 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 60774 gttttacaagtttaacatg 60756
>emb|BX927400.10| Zebrafish DNA sequence from clone CH211-195K18 in linkage group 19, complete sequence Length = 172655 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 110792 gttttacaagtttaacatg 110774
>emb|AL954363.27| Zebrafish DNA sequence from clone CH211-175L6 in linkage group 3, complete sequence Length = 160599 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 35923 gttttacaagtttaacatg 35905
>emb|BX470217.15| Zebrafish DNA sequence from clone CH211-231P4 in linkage group 20, complete sequence Length = 119560 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 33610 gttttacaagtttaacatg 33592
>emb|BX248104.5| Zebrafish DNA sequence from clone DKEY-77P13 in linkage group 20, complete sequence Length = 139851 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 52729 gttttacaagtttaacatg 52711
>emb|CR392029.12| Zebrafish DNA sequence from clone DKEY-188H10 in linkage group 3, complete sequence Length = 130871 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 57540 gttttacaagtttaacatg 57522
>emb|AL772340.19| Zebrafish DNA sequence from clone CH211-150G2, complete sequence Length = 174176 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 157329 gttttacaagtttaacatg 157311
>emb|CR391965.8| Zebrafish DNA sequence from clone CH211-124O16 in linkage group 24, complete sequence Length = 157418 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 60671 gttttacaagtttaacatg 60653
>emb|CR848789.11| Zebrafish DNA sequence from clone DKEYP-114B4 in linkage group 16, complete sequence Length = 195410 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 179729 gttttacaagtttaacatg 179747
>emb|AL133372.4|CNS01DUX Human chromosome 14 DNA sequence BAC R-269C4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 190910 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 aaattctttattcccaagg 30 ||||||||||||||||||| Sbjct: 183231 aaattctttattcccaagg 183249
>emb|CR450781.12| Zebrafish DNA sequence from clone DKEY-20O6 in linkage group 24, complete sequence Length = 215010 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 57764 gttttacaagtttaacatg 57782
>emb|CR388363.15| Zebrafish DNA sequence from clone DKEY-254E13 in linkage group 14, complete sequence Length = 176437 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 175344 gttttacaagtttaacatg 175362
>emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in linkage group 21, complete sequence Length = 253718 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 235827 gttttacaagtttaacatg 235845
>dbj|AP002760.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-795E18, complete sequence Length = 211673 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 tttcctaagaatataaaca 100 ||||||||||||||||||| Sbjct: 128915 tttcctaagaatataaaca 128933
>emb|BX000705.13| Zebrafish DNA sequence from clone DKEY-76D18, complete sequence Length = 255779 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 243529 gttttacaagtttaacatg 243547
>emb|CR388223.15| Zebrafish DNA sequence from clone DKEY-100N19, complete sequence Length = 181759 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 25897 gttttacaagtttaacatg 25879
>emb|CR936402.11| Zebrafish DNA sequence from clone CH211-276P20 in linkage group 3, complete sequence Length = 92277 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 84536 gttttacaagtttaacatg 84554
>emb|CT025706.7| Zebrafish DNA sequence from clone CH211-241M24 in linkage group 5, complete sequence Length = 99027 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 34327 gttttacaagtttaacatg 34345
>emb|BX004822.12| Zebrafish DNA sequence from clone DKEY-18F18, complete sequence Length = 201902 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 75691 gttttacaagtttaacatg 75673
>gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complete sequence Length = 236514 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 aaatatatgttcctttgaa 67 ||||||||||||||||||| Sbjct: 210127 aaatatatgttcctttgaa 210145
>emb|AL929130.4| Zebrafish DNA sequence from clone CH211-287M16 in linkage group 18, complete sequence Length = 149702 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 31909 gttttacaagtttaacatg 31927
>emb|BX897740.7| Zebrafish DNA sequence from clone CH211-257M21 in linkage group 5, complete sequence Length = 160056 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gttttacaagtttaacatg 121 ||||||||||||||||||| Sbjct: 144042 gttttacaagtttaacatg 144060
>emb|AL121840.4|CNS01DSR Human chromosome 14 DNA sequence BAC C-2251F13 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 93432 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 aaattctttattcccaagg 30 ||||||||||||||||||| Sbjct: 90781 aaattctttattcccaagg 90763
>emb|AL606920.5| Mouse DNA sequence from clone RP23-183J6 on chromosome 3, complete sequence Length = 89297 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 cagtgttttacaagtttaa 117 ||||||||||||||||||| Sbjct: 34102 cagtgttttacaagtttaa 34120
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 caaggtcaagggtgacgca 44 ||||||||||||||||||| Sbjct: 1581818 caaggtcaagggtgacgca 1581800 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,474,244 Number of Sequences: 3902068 Number of extensions: 1474244 Number of successful extensions: 104026 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103777 Number of HSP's gapped (non-prelim): 249 length of query: 128 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 107 effective length of database: 17,151,101,840 effective search space: 1835167896880 effective search space used: 1835167896880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)