>PYRB_BACTN (Q8A9S3) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate|
           transcarbamylase) (ATCase)
          Length = 313

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/69 (26%), Positives = 36/69 (52%)
 Frame = -2

Query: 260 CRNDFPKFRKHTEQKGTTEDNIEKESLKHMILIRRGKLNLQVEYVSIRK*LLLPNVILQM 81
           C+    K+ +HTE    TE+ I    + +M  ++R +    +EY  ++   +L N +L+ 
Sbjct: 196 CKEHQIKYIEHTE---FTEEIIADADILYMTRVQRERFTDLMEYERVKNVYILRNKMLEN 252

Query: 80  TKLTVNILY 54
           T+  + IL+
Sbjct: 253 TRPNLRILH 261

>YCF2_MARPO (P09975) Protein ycf2|
          Length = 2136

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +1

Query: 124  LTYSTCKFNFPRLIRIICFRLSFSILSSV-VPFCSVCFLNLG 246
            LTY+  K NF R+ +I+ +++  +I+ ++ +   S+  LN+G
Sbjct: 1623 LTYTNNKLNFDRIFKIVIYKVGKTIIQNILIKSSSMNLLNIG 1664

>CEMA_PORPU (P51232) Chloroplast envelope membrane protein|
          Length = 278

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 20/68 (29%), Positives = 33/68 (48%)
 Frame = -2

Query: 278 GPVPERCRNDFPKFRKHTEQKGTTEDNIEKESLKHMILIRRGKLNLQVEYVSIRK*LLLP 99
           GP+P    N F KFRK  +  G      E E+++   L R   +   V+Y+ +   L+ P
Sbjct: 18  GPIPRSITNTFEKFRKELDPNG------ESEAIEEFRLSRHQTIT-SVKYIFLL--LISP 68

Query: 98  NVILQMTK 75
            ++ Q +K
Sbjct: 69  VLVNQASK 76

>YIF1A_BRARE (Q6PC24) Protein YIF1A (YIP1-interacting factor homolog A)|
          Length = 307

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 79  VICKITLGSNSYFLILTYSTCKFNFPRLIRIICFRLSFSILSSV 210
           V C +  GS+ Y++ L +S+C   F      I   L   ILSS+
Sbjct: 229 VFCGLLFGSDGYYVALAWSSCALMF-----FIVRSLKMKILSSI 267


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,502,024
Number of Sequences: 219361
Number of extensions: 727472
Number of successful extensions: 1717
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1717
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)