ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl47a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB028870.1| Hordeum vulgare Hv-MMT1 mRNA for S-adenosyl-L-me... 313 9e-83
2gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 42 0.49
3ref|NM_120230.2| Arabidopsis thaliana protein binding / ubiquiti... 40 1.9
4ref|NM_202992.1| Arabidopsis thaliana protein binding / zinc ion... 40 1.9
5gb|AC159418.1| Trypanosoma brucei chromosome 5 clone RPCI93-25N2... 40 1.9
6gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 1.9
7gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosom... 40 1.9
8emb|Z70752.1|CEF25B3 Caenorhabditis elegans Cosmid F25B3, comple... 40 1.9
9gb|AC141864.7| Medicago truncatula clone mth2-21o24, complete se... 40 1.9
10emb|AL354807.6| Human DNA sequence from clone RP11-522F22 on chr... 40 1.9
11gb|AY091999.1| Macaca sp. phenylalanine hydroxylase gene, partia... 40 1.9
12gb|AY091998.1| Pongo pygmaeus phenylalanine hydroxylase gene, pa... 40 1.9
13gb|AY091997.1| Gorilla gorilla phenylalanine hydroxylase gene, p... 40 1.9
14gb|AY091165.1| Arabidopsis thaliana unknown protein (At5g01520) ... 40 1.9
15gb|AY056355.1| Arabidopsis thaliana unknown protein (At5g01520) ... 40 1.9
16gb|AY050835.1| Arabidopsis thaliana unknown protein (At5g01520) ... 40 1.9
17gb|AF370144.1| Arabidopsis thaliana unknown protein (At5g01520) ... 40 1.9
18emb|AL161946.1|ATF7A7 Arabidopsis thaliana DNA chromosome 5, BAC... 40 1.9
19gb|AC069227.24| Homo sapiens 12 BAC RP11-478G16 (Roswell Park Ca... 40 1.9
20dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 40 1.9
21gb|AF404777.1| Homo sapiens phenylalanine hydroxylase (PAH) gene... 40 1.9
22ref|NM_073072.3| Caenorhabditis elegans F25B3.6 (F25B3.6) mRNA, ... 40 1.9
23gb|DQ059129.1| Arabidopsis thaliana RING finger family protein (... 40 1.9
24gb|AF204239.1|AF204239 Homo sapiens phenylalanine hydroxylase ge... 40 1.9
25emb|AL591807.1|CNS07EGQ Human chromosome 14 DNA sequence BAC R-1... 40 1.9
26gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 1.9
27gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, comple... 40 1.9
28gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, comple... 40 1.9
29gb|BC088893.1| Xenopus tropicalis cDNA clone IMAGE:7006139 38 7.7
30gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, comp... 38 7.7
31ref|NM_207654.1| Mus musculus ephrin A5 (Efna5), transcript vari... 38 7.7
32ref|NM_010109.2| Mus musculus ephrin A5 (Efna5), transcript vari... 38 7.7
33gb|BC040218.1| Mus musculus ephrin A5, transcript variant 1, mRN... 38 7.7
34gb|AC134243.3| Mus musculus BAC clone RP24-90E15 from chromosome... 38 7.7
35emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chro... 38 7.7
36ref|XM_800556.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 7.7
37emb|Z66520.1|CEF49E12 Caenorhabditis elegans Cosmid F49E12, comp... 38 7.7
38gb|AC149806.16| Medicago truncatula clone mth2-150h12, complete ... 38 7.7
39gb|AC153125.10| Medicago truncatula clone mth2-74f16, complete s... 38 7.7
40emb|AL137853.12| Human DNA sequence from clone RP4-562N20 on chr... 38 7.7
41gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, com... 38 7.7
42emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chr... 38 7.7
43emb|AJ296569.1|UBA296569 Uncultured bacterium GR-WP33-30 16S rRN... 38 7.7
44gb|AC091155.5| Homo sapiens chromosome 17, clone CTD1-2306D4, co... 38 7.7
45gb|AF407036.1| Plocepasser mahali tRNA-Met gene, partial sequenc... 38 7.7
46gb|AC103864.2| Homo sapiens chromosome 8, clone RP11-192P9, comp... 38 7.7
47gb|AC093878.3| Homo sapiens BAC clone RP11-638O6 from 4, complet... 38 7.7
48gb|AC079090.4| Homo sapiens chromosome 15, clone RP11-268O3, com... 38 7.7
49gb|AF325335.1|F325326S10 Homo sapiens macrophin 1 isoforms (MACF... 38 7.7
50ref|XM_680910.1| PREDICTED: Danio rerio similar to Mrpl47 protei... 38 7.7
51gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76... 38 7.7
52gb|AC019246.6|AC019246 Homo sapiens, clone RP11-2K18, complete s... 38 7.7
53gb|AC121324.5| Homo sapiens chromosome 15, clone RP11-959E3, com... 38 7.7
54gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, r... 38 7.7
55gb|AC150255.7| Aedes aegypti, clone XX-85K2, complete sequence 38 7.7
56gb|AC007496.6| Homo sapiens chromosome 16 clone RP11-357N13, com... 38 7.7
57gb|AC124091.16| Homo sapiens chromosome 15, clone RP11-640H21, c... 38 7.7
58gb|AE016830.1| Enterococcus faecalis V583, complete genome 38 7.7
59emb|CR388150.14| Zebrafish DNA sequence from clone DKEY-115A2 in... 38 7.7
60gb|AC163697.3| Gallus gallus BAC clone CH261-186A14 from chromos... 38 7.7
61gb|AC159009.2| Gallus gallus BAC clone CH261-189M12 from chromos... 38 7.7
62gb|AC154248.2| Mus musculus BAC clone RP24-182I14 from chromosom... 38 7.7
63emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, ... 38 7.7
64emb|AL731701.8| Mouse DNA sequence from clone RP23-140L6 on chro... 38 7.7 
>dbj|AB028870.1| Hordeum vulgare Hv-MMT1 mRNA for S-adenosyl-L-methionine:
            L-methionine S-methyltransferase, complete cds
          Length = 3543

 Score =  313 bits (158), Expect = 9e-83
 Identities = 158/158 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    acaccaagagattcaacgcttttattccttttttgattcgaaacaaagttgttcaaacag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3482 acaccaagagattcaacgcttttattccttttttgattcgaaacaaagttgttcaaacag 3423

                                                                        
Query: 61   gcaaagaaagataagagttggttccccttcaggttttacagtttcttcacccacttgacc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3422 gcaaagaaagataagagttggttccccttcaggttttacagtttcttcacccacttgacc 3363

                                                  
Query: 121  cacccaacaacccctagttgctaccattcaccttagca 158
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 3362 cacccaacaacccctagttgctaccattcaccttagca 3325
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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 87     cttcaggttttacagtttctt 107
              |||||||||||||||||||||
Sbjct: 897732 cttcaggttttacagtttctt 897712
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>ref|NM_120230.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT5G01520 transcript variant
           AT5G01520.1 mRNA, complete cds
          Length = 1306

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837
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>ref|NM_202992.1| Arabidopsis thaliana protein binding / zinc ion binding AT5G01520
           transcript variant AT5G01520.2 mRNA, complete cds
          Length = 1325

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837
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>gb|AC159418.1| Trypanosoma brucei chromosome 5 clone RPCI93-25N21, complete sequence
          Length = 80752

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    attcaacgcttttattcctttttt 34
             |||||||| |||||||||||||||
Sbjct: 42201 attcaacgtttttattcctttttt 42224
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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    attcaacgcttttattcctttttt 34
             |||||||| |||||||||||||||
Sbjct: 38552 attcaacgtttttattcctttttt 38529
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>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence
          Length = 197482

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    cttttattccttttttgatt 38
             ||||||||||||||||||||
Sbjct: 66041 cttttattccttttttgatt 66022
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>emb|Z70752.1|CEF25B3 Caenorhabditis elegans Cosmid F25B3, complete sequence
          Length = 30182

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ttttattccttttttgattc 39
             ||||||||||||||||||||
Sbjct: 29284 ttttattccttttttgattc 29265
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>gb|AC141864.7| Medicago truncatula clone mth2-21o24, complete sequence
          Length = 106571

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 86     ccttcaggttttacagtttcttca 109
              ||||||||||| ||||||||||||
Sbjct: 100223 ccttcaggtttcacagtttcttca 100246
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>emb|AL354807.6| Human DNA sequence from clone RP11-522F22 on chromosome 13 Contains a
             DnaJ (Hsp40) homolog, subfamily A, member 1 (DNAJA1)
             pseudogene, complete sequence
          Length = 157135

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    aaagttgttcaaacaggcaa 64
             ||||||||||||||||||||
Sbjct: 24310 aaagttgttcaaacaggcaa 24329
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>gb|AY091999.1| Macaca sp. phenylalanine hydroxylase gene, partial cds
          Length = 1149

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  aggcaaagaaagataagagt 78
           ||||||||||||||||||||
Sbjct: 427 aggcaaagaaagataagagt 408
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>gb|AY091998.1| Pongo pygmaeus phenylalanine hydroxylase gene, partial cds
          Length = 1148

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  aggcaaagaaagataagagt 78
           ||||||||||||||||||||
Sbjct: 427 aggcaaagaaagataagagt 408
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>gb|AY091997.1| Gorilla gorilla phenylalanine hydroxylase gene, partial cds
          Length = 1148

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  aggcaaagaaagataagagt 78
           ||||||||||||||||||||
Sbjct: 427 aggcaaagaaagataagagt 408
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>gb|AY091165.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 760

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 453 gattcgaaacaaagttgttc 472
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>gb|AY056355.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 550

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 453 gattcgaaacaaagttgttc 472
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>gb|AY050835.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 1285

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837
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>gb|AF370144.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 1327

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837
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>emb|AL161946.1|ATF7A7 Arabidopsis thaliana DNA chromosome 5, BAC clone F7A7 (ESSA project)
          Length = 86690

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    gattcgaaacaaagttgttc 54
             ||||||||||||||||||||
Sbjct: 15695 gattcgaaacaaagttgttc 15714
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>gb|AC069227.24| Homo sapiens 12 BAC RP11-478G16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 167398

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    aggcaaagaaagataagagt 78
             ||||||||||||||||||||
Sbjct: 88691 aggcaaagaaagataagagt 88672
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>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 65      agaaagataagagttggttc 84
               ||||||||||||||||||||
Sbjct: 2524950 agaaagataagagttggttc 2524969
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>gb|AF404777.1| Homo sapiens phenylalanine hydroxylase (PAH) gene, complete cds
          Length = 171266

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    aggcaaagaaagataagagt 78
             ||||||||||||||||||||
Sbjct: 92558 aggcaaagaaagataagagt 92539
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>ref|NM_073072.3| Caenorhabditis elegans F25B3.6 (F25B3.6) mRNA, complete cds
          Length = 2356

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   ttttattccttttttgattc 39
            ||||||||||||||||||||
Sbjct: 2225 ttttattccttttttgattc 2244
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>gb|DQ059129.1| Arabidopsis thaliana RING finger family protein (At5g01520) mRNA,
           complete cds
          Length = 729

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 453 gattcgaaacaaagttgttc 472
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>gb|AF204239.1|AF204239 Homo sapiens phenylalanine hydroxylase gene, intron 7, complete
           sequence
          Length = 1058

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  aggcaaagaaagataagagt 78
           ||||||||||||||||||||
Sbjct: 373 aggcaaagaaagataagagt 354
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>emb|AL591807.1|CNS07EGQ Human chromosome 14 DNA sequence BAC R-1047D15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 183418

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    ataagagttggttccccttc 90
             ||||||||||||||||||||
Sbjct: 28958 ataagagttggttccccttc 28939
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 72      taagagttggttccccttca 91
               ||||||||||||||||||||
Sbjct: 1761075 taagagttggttccccttca 1761056
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>gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, complete sequence
          Length = 182101

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 54     caaacaggcaaagaaagataagag 77
              |||||||||||| |||||||||||
Sbjct: 160718 caaacaggcaaacaaagataagag 160741
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>gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, complete sequence
          Length = 189301

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 54    caaacaggcaaagaaagataagag 77
             |||||||||||| |||||||||||
Sbjct: 28917 caaacaggcaaacaaagataagag 28940
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>gb|BC088893.1| Xenopus tropicalis cDNA clone IMAGE:7006139
          Length = 1582

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 73  aagagttggttccccttcaggtt 95
           |||||||||||| ||||||||||
Sbjct: 519 aagagttggttcaccttcaggtt 541
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>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence
          Length = 210751

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 20   ttttattccttttttgatt 38
            |||||||||||||||||||
Sbjct: 2811 ttttattccttttttgatt 2829
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>ref|NM_207654.1| Mus musculus ephrin A5 (Efna5), transcript variant 1, mRNA
          Length = 3473

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 118  acccacccaacaacccctagttg 140
            ||||||||||||||||| |||||
Sbjct: 1049 acccacccaacaaccccaagttg 1027
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>ref|NM_010109.2| Mus musculus ephrin A5 (Efna5), transcript variant 2, mRNA
          Length = 3392

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 118 acccacccaacaacccctagttg 140
           ||||||||||||||||| |||||
Sbjct: 968 acccacccaacaaccccaagttg 946
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>gb|BC040218.1| Mus musculus ephrin A5, transcript variant 1, mRNA (cDNA clone
            MGC:36080 IMAGE:4954352), complete cds
          Length = 3474

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 118  acccacccaacaacccctagttg 140
            ||||||||||||||||| |||||
Sbjct: 1049 acccacccaacaaccccaagttg 1027
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>gb|AC134243.3| Mus musculus BAC clone RP24-90E15 from chromosome 17, complete sequence
          Length = 193151

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 118   acccacccaacaacccctagttg 140
             ||||||||||||||||| |||||
Sbjct: 54826 acccacccaacaaccccaagttg 54848
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>emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chromosome 13, complete
            sequence
          Length = 220233

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 56   aacaggcaaagaaagataagagt 78
            ||||||||||| |||||||||||
Sbjct: 4898 aacaggcaaaggaagataagagt 4876
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>ref|XM_800556.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508803.10) partial mRNA
          Length = 492

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 18  gcttttattccttttttga 36
           |||||||||||||||||||
Sbjct: 446 gcttttattccttttttga 464
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>emb|Z66520.1|CEF49E12 Caenorhabditis elegans Cosmid F49E12, complete sequence
          Length = 40450

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    ttttattccttttttgatt 38
             |||||||||||||||||||
Sbjct: 27545 ttttattccttttttgatt 27527
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>gb|AC149806.16| Medicago truncatula clone mth2-150h12, complete sequence
          Length = 113593

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 20    ttttattccttttttgattcgaaacaa 46
             ||||||||||||||| |||| ||||||
Sbjct: 45122 ttttattccttttttaattccaaacaa 45148
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>gb|AC153125.10| Medicago truncatula clone mth2-74f16, complete sequence
          Length = 128458

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    aaacaaagttgttcaaaca 59
             |||||||||||||||||||
Sbjct: 64811 aaacaaagttgttcaaaca 64829
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>emb|AL137853.12| Human DNA sequence from clone RP4-562N20 on chromosome 1p21.3-23
             Contains part of the MACF1 gene for microtubule-actin
             crosslinking factor 1 and a CpG island, complete sequence
          Length = 113853

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 61    gcaaagaaagataagagtt 79
             |||||||||||||||||||
Sbjct: 26431 gcaaagaaagataagagtt 26413
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>gb|AC161185.5| Mus musculus chromosome 5, clone RP23-297D16, complete sequence
          Length = 206099

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    ttttattccttttttgatt 38
             |||||||||||||||||||
Sbjct: 57317 ttttattccttttttgatt 57299
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>emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chromosome 4 Contains a
             novel gene and a casein kinase II alpha 1 polypeptide
             (Csnk2a1) pseudogene, complete sequence
          Length = 134053

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 53    tcaaacaggcaaagaaaga 71
             |||||||||||||||||||
Sbjct: 56535 tcaaacaggcaaagaaaga 56553
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>emb|AJ296569.1|UBA296569 Uncultured bacterium GR-WP33-30 16S rRNA gene, clone GR-WP33-30
          Length = 1318

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 132  ccctagttgctaccattca 150
            |||||||||||||||||||
Sbjct: 1067 ccctagttgctaccattca 1085
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>gb|AC091155.5| Homo sapiens chromosome 17, clone CTD1-2306D4, complete sequence
          Length = 144430

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 95    tttacagtttcttcaccca 113
             |||||||||||||||||||
Sbjct: 19256 tttacagtttcttcaccca 19238
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>gb|AF407036.1| Plocepasser mahali tRNA-Met gene, partial sequence; NADH
           dehydrogenase subunit 2 (ND2) gene, complete cds; and
           tRNA-Trp gene, partial sequence; mitochondrial genes for
           mitochondrial products
          Length = 1088

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 107 tcacccacttgacccacccaaca 129
           ||||||| |||||||||||||||
Sbjct: 278 tcacccaattgacccacccaaca 300
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>gb|AC103864.2| Homo sapiens chromosome 8, clone RP11-192P9, complete sequence
          Length = 164867

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    aaagaaagataagagttgg 81
             |||||||||||||||||||
Sbjct: 16659 aaagaaagataagagttgg 16641
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>gb|AC093878.3| Homo sapiens BAC clone RP11-638O6 from 4, complete sequence
          Length = 176018

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    gcttttattccttttttga 36
             |||||||||||||||||||
Sbjct: 72961 gcttttattccttttttga 72979
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>gb|AC079090.4| Homo sapiens chromosome 15, clone RP11-268O3, complete sequence
          Length = 158510

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 52   ttcaaacaggcaaagaaag 70
            |||||||||||||||||||
Sbjct: 2530 ttcaaacaggcaaagaaag 2512
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>gb|AF325335.1|F325326S10 Homo sapiens macrophin 1 isoforms (MACF1) gene, exons 51, 52, and 53
          Length = 5986

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 61   gcaaagaaagataagagtt 79
            |||||||||||||||||||
Sbjct: 4021 gcaaagaaagataagagtt 4003
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>ref|XM_680910.1| PREDICTED: Danio rerio similar to Mrpl47 protein (LOC557789), mRNA
          Length = 753

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 94  ttttacagtttcttcaccc 112
           |||||||||||||||||||
Sbjct: 255 ttttacagtttcttcaccc 237
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>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete
              sequence
          Length = 287397

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 19     cttttattccttttttgat 37
              |||||||||||||||||||
Sbjct: 166164 cttttattccttttttgat 166146
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>gb|AC019246.6|AC019246 Homo sapiens, clone RP11-2K18, complete sequence
          Length = 154984

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    aaagaaagataagagttgg 81
             |||||||||||||||||||
Sbjct: 28870 aaagaaagataagagttgg 28852
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>gb|AC121324.5| Homo sapiens chromosome 15, clone RP11-959E3, complete sequence
          Length = 192087

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 52    ttcaaacaggcaaagaaag 70
             |||||||||||||||||||
Sbjct: 79999 ttcaaacaggcaaagaaag 79981
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>gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone
             BACR09L14, complete sequence
          Length = 167368

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    cttttattccttttttgat 37
             |||||||||||||||||||
Sbjct: 75984 cttttattccttttttgat 75966
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>gb|AC150255.7| Aedes aegypti, clone XX-85K2, complete sequence
          Length = 164368

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    tttgattcgaaacaaagtt 50
             |||||||||||||||||||
Sbjct: 53597 tttgattcgaaacaaagtt 53579
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>gb|AC007496.6| Homo sapiens chromosome 16 clone RP11-357N13, complete sequence
          Length = 198417

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 20     ttttattccttttttgatt 38
              |||||||||||||||||||
Sbjct: 139880 ttttattccttttttgatt 139862
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>gb|AC124091.16| Homo sapiens chromosome 15, clone RP11-640H21, complete sequence
          Length = 196827

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 52     ttcaaacaggcaaagaaag 70
              |||||||||||||||||||
Sbjct: 128818 ttcaaacaggcaaagaaag 128800
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>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 87     cttcaggttttacagtttcttca 109
              ||||||||||||||||| |||||
Sbjct: 669542 cttcaggttttacagttacttca 669520
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>emb|CR388150.14| Zebrafish DNA sequence from clone DKEY-115A2 in linkage group 3, complete
              sequence
          Length = 170964

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 104    tcttcacccacttgaccca 122
              |||||||||||||||||||
Sbjct: 165206 tcttcacccacttgaccca 165188
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>gb|AC163697.3| Gallus gallus BAC clone CH261-186A14 from chromosome unknown, complete
             sequence
          Length = 224517

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    acaggcaaagaaagataag 75
             |||||||||||||||||||
Sbjct: 20124 acaggcaaagaaagataag 20142
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>gb|AC159009.2| Gallus gallus BAC clone CH261-189M12 from chromosome unknown, complete
              sequence
          Length = 211745

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 57     acaggcaaagaaagataag 75
              |||||||||||||||||||
Sbjct: 105010 acaggcaaagaaagataag 105028
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>gb|AC154248.2| Mus musculus BAC clone RP24-182I14 from chromosome 13, complete sequence
          Length = 188542

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 56     aacaggcaaagaaagataagagt 78
              ||||||||||| |||||||||||
Sbjct: 174218 aacaggcaaaggaagataagagt 174196
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>emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, complete sequence
          Length = 188745

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 94     ttttacagtttcttcaccc 112
              |||||||||||||||||||
Sbjct: 156185 ttttacagtttcttcaccc 156203
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>emb|AL731701.8| Mouse DNA sequence from clone RP23-140L6 on chromosome X, complete
             sequence
          Length = 128198

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 88    ttcaggttttacagtttct 106
             |||||||||||||||||||
Sbjct: 58608 ttcaggttttacagtttct 58626


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,704,438
Number of Sequences: 3902068
Number of extensions: 1704438
Number of successful extensions: 137533
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137278
Number of HSP's gapped (non-prelim): 255
length of query: 159
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 137
effective length of database: 17,147,199,772
effective search space: 2349166368764
effective search space used: 2349166368764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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