Clone Name | rbastl47a04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PPK_BACHD (Q9KD27) Polyphosphate kinase (EC 2.7.4.1) (Polyphosph... | 29 | 2.7 | 2 | SSB_WIGBR (Q8D254) Single-stranded DNA-binding protein (SSB) (He... | 29 | 3.5 | 3 | LIPP_PIG (P00591) Pancreatic triacylglycerol lipase (EC 3.1.1.3)... | 28 | 4.5 | 4 | DEPD5_MOUSE (P61460) DEP domain-containing protein 5 | 28 | 7.8 | 5 | DEPD5_HUMAN (O75140) DEP domain-containing protein 5 | 28 | 7.8 |
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>PPK_BACHD (Q9KD27) Polyphosphate kinase (EC 2.7.4.1) (Polyphosphoric acid| kinase) (ATP-polyphosphate phosphotransferase) Length = 705 Score = 29.3 bits (64), Expect = 2.7 Identities = 15/70 (21%), Positives = 32/70 (45%) Frame = +1 Query: 19 IPSIHPYKIRQFTPFPVHERSQRDPLQPTRSEIRMGRKRRRILHGFFTGTNATDSLSFLV 198 + S+ P++I + P+HE RD L+ E++ + + G + L L+ Sbjct: 232 VKSVSPFRITRNADLPIHEEGARDLLREIEKELKKRKWGAAVRLEMQEGLMDPNVLKLLL 291 Query: 199 NLRHIFRQNV 228 ++ I + +V Sbjct: 292 DVLEIHKNDV 301
>SSB_WIGBR (Q8D254) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 163 Score = 28.9 bits (63), Expect = 3.5 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +3 Query: 39 QDQAIHTISSP*TVTERSITTYQV-RDKNGEEEKENTTWLFYRDERHRFIVF 191 QD + I + +T S+ T + RDKN E KE T W HR I+F Sbjct: 17 QDPEVRYIPNGNAITNLSLATSENWRDKNTGESKEKTEW-------HRVILF 61
>LIPP_PIG (P00591) Pancreatic triacylglycerol lipase (EC 3.1.1.3) (Pancreatic| lipase) (PL) Length = 450 Score = 28.5 bits (62), Expect = 4.5 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +1 Query: 88 DPLQPTRSEIRMGRKRRRILHGF 156 DP T S RM RK R I+HGF Sbjct: 56 DPSTITNSNFRMDRKTRFIIHGF 78
>DEPD5_MOUSE (P61460) DEP domain-containing protein 5| Length = 1527 Score = 27.7 bits (60), Expect = 7.8 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +1 Query: 73 ERSQRDPLQPTRSEIRMGRKRRRILHGFFTGTNATDSLSFLVNLRHIFRQNVGYL 237 +R+ +P P+R +++ RRR +H F G + + + H RQN+ L Sbjct: 552 QRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGE-----AIQIHHQTRQNMAEL 601
>DEPD5_HUMAN (O75140) DEP domain-containing protein 5| Length = 1572 Score = 27.7 bits (60), Expect = 7.8 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +1 Query: 73 ERSQRDPLQPTRSEIRMGRKRRRILHGFFTGTNATDSLSFLVNLRHIFRQNVGYL 237 +R+ +P P+R +++ RRR +H F G + + + H RQN+ L Sbjct: 594 QRALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGE-----AIQIHHQTRQNMAEL 643 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,914,272 Number of Sequences: 219361 Number of extensions: 600420 Number of successful extensions: 1556 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1517 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1556 length of database: 80,573,946 effective HSP length: 74 effective length of database: 64,341,232 effective search space used: 1544189568 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)