>CWF19_SCHPO (Q09909) Cell cycle control protein cwf19|
          Length = 639

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 198 NQTGCETFHPGTENHHHSRHGNPGHPCHFGTHRPA 302
           N+T  ET H     HHHSRH    H  H  + RP+
Sbjct: 16  NETDRETNHSRRHRHHHSRHRESKHGRHDRSERPS 50

>SEPP1_RAT (P25236) Selenoprotein P precursor (SeP) [Contains: Selenoprotein|
           Se-P10; Selenoprotein Se-P6; Selenoprotein Se-P2;
           Selenoprotein Se-P1]
          Length = 385

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 204 TGCETFHPGTENHHHSRHGNPGHPCHFGTHRPAQS 308
           T  +T  P  E++HH  H   GH  H G+ +P+++
Sbjct: 193 TASKTTEPSEEHNHHKHHDKHGHE-HLGSSKPSEN 226

>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 16/55 (29%), Positives = 16/55 (29%)
 Frame = +3

Query: 174 HCHPL*TRNQTGCETFHPGTENHHHSRHGNPGHPCHFGTHRPAQSLLCQHSQTSH 338
           H HP         E  H     HHH  H  P H  H G H         H    H
Sbjct: 79  HHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLGHHHHHHHAAHHHHHEEH 133



 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 222 HPGTENHHHSRHGNPGHPCHFGTH 293
           H G  +HHH  HG+  H  H   H
Sbjct: 221 HHGHHHHHHHHHGHHHHHHHHHGH 244

>CAUP_DROME (P54269) Homeobox protein caupolican|
          Length = 693

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/55 (25%), Positives = 20/55 (36%)
 Frame = +3

Query: 126 YQTSNFYRACLGSPCVHCHPL*TRNQTGCETFHPGTENHHHSRHGNPGHPCHFGT 290
           Y   NFY        +   PL    Q   +      ++HHH  H +P H    G+
Sbjct: 480 YLGQNFYPPSSADQQLPHQPLQQHQQQQLQQLQQQQQHHHHPHHHHPHHSMELGS 534

>GSC_DROME (P54366) Homeobox protein goosecoid|
          Length = 419

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 228 GTENHHHSRHGNPGHPCHFGTHRPAQ 305
           G  +H H  HG+P HP H G H   Q
Sbjct: 247 GHGHHPHHPHGHPHHP-HLGAHHHGQ 271

>ERC2_MOUSE (Q6PH08) ERC protein 2 (CAZ-associated structural protein 1) (CAST1)|
          Length = 957

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 213  ETFHPGTENHHHSRHGNPGHPCHFGTHRPA 302
            E  H    +HHH  H +PG   H   HRP+
Sbjct: 918  EDHHHYHHHHHHHHHRSPGRSQH-SNHRPS 946

>LRCH1_HUMAN (Q9Y2L9) Leucine-rich repeats and calponin homology|
           domain-containing protein 1 (Calponin homology
           domain-containing protein 1) (Neuronal protein 81)
           (NP81)
          Length = 728

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 222 HPGTENHHHSRHGNPGHP 275
           HP   +HHH  HG  G P
Sbjct: 25  HPHHHHHHHQHHGGTGAP 42

>YDH3_PLAFS (P14589) Hypothetical protein 3' to Asp-rich and His-rich proteins|
           (Fragment)
          Length = 53

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 328 WLCWQRRLWAGRW 290
           W CW+RR W  RW
Sbjct: 13  WWCWRRRGWRRRW 25

>Y2392_ARCFU (O30279) Hypothetical protein AF2392|
          Length = 86

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -3

Query: 292 WVPK*QGWPGFPWRLWWWF---SVPGW 221
           W+P   GW G  WR  WW+    +PGW
Sbjct: 4   WMP---GWGGRGWR--WWYRATGLPGW 25

>POU23_BRARE (P79745) POU domain protein ZP-23|
          Length = 443

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 195 RNQTGCETFHPGTENHHHSRHGNPGHPCHFG 287
           +N +G +  H GT  HH + H  P H  H G
Sbjct: 119 KNNSGRDDLHSGTALHHRAPHLGP-HQTHAG 148

>PKNA2_BIFLO (Q8G4G1) Probable serine/threonine-protein kinase pknA2 (EC|
           2.7.11.1)
          Length = 757

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -3

Query: 247 WWWFSVPG--WKVSQP 206
           WWWF+ PG  W V +P
Sbjct: 445 WWWFAGPGSYWSVPKP 460


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,354,199
Number of Sequences: 219361
Number of extensions: 886531
Number of successful extensions: 3013
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2970
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)