>gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, complete cds
          Length = 3695

 Score =  313 bits (158), Expect = 2e-82
 Identities = 259/291 (89%), Gaps = 10/291 (3%)
 Strand = Plus / Minus

                                                                        
Query: 53   ttttagttgtaaacgcatcatgcaaca--------gatgatgttgtgcgt-gtcttgtga 103
            |||||||||| ||||||||||||||||        ||||||||||||| | |||| ||||
Sbjct: 3687 ttttagttgtgaacgcatcatgcaacaattatcaagatgatgttgtgcctagtctcgtga 3628

                                                                        
Query: 104  atcgtgatgtctggtaacaactccagatcagcccccaatgatccaatcgacatcgagatg 163
            || || ||||||||||||||| | |||||||||||||||||||| ||||||||| |||||
Sbjct: 3627 atagttatgtctggtaacaacccgagatcagcccccaatgatccgatcgacatcaagatg 3568

                                                                        
Query: 164  gtagaaaggaaaa-tcagtcagtaatgtggcttaagcccccactcagcttacagtcacta 222
            ||||||||||||| ||||||  ||||||||||||||||||||||||||||||| ||||||
Sbjct: 3567 gtagaaaggaaaaatcagtcgataatgtggcttaagcccccactcagcttacaatcacta 3508

                                                                        
Query: 223  atgcaactcatgacttgtcagtcgatcaggcatgaccaaccacaagatcatgtgaacaca 282
            |||| ||||||||| ||||||||||||  |||||||||||||||||||||||| ||| ||
Sbjct: 3507 atgcgactcatgacatgtcagtcgatccagcatgaccaaccacaagatcatgtaaacgca 3448

                                                               
Query: 283  gatgaagcgcttcttcagcggaagtagacagacacaagcgggatgtcgaca 333
            || | |||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 3447 gaaggagcgcttcttcagcggaagtagaccgacacaagtgggatgtcgaca 3397

>gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds
          Length = 3586

 Score =  174 bits (88), Expect = 1e-40
 Identities = 150/169 (88%), Gaps = 10/169 (5%)
 Strand = Plus / Minus

                                                                        
Query: 50   caattttagttgtaaacgcatcatgcaaca--------gatgatgttgtgcgt-gtcttg 100
            ||||||||| ||||||||||||||||||||        ||||||||||||| | |||| |
Sbjct: 3571 caattttagctgtaaacgcatcatgcaacaattatcaagatgatgttgtgcctagtctcg 3512

                                                                        
Query: 101  tgaatcgtgatgtctggtaacaactccagatcagcccccaatgatccaatcgacatcga- 159
            |||||| ||||||||||||||||| | |||||||||||||||||||| ||||||||| | 
Sbjct: 3511 tgaatcatgatgtctggtaacaacccgagatcagcccccaatgatccgatcgacatcaaa 3452

                                                             
Query: 160  gatggtagaaaggaaaatcagtcagtaatgtggcttaagcccccactca 208
            ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3451 gatggtagaaaggaaaatcagtcggtaatgtggcttaagcccccactca 3403



 Score =  115 bits (58), Expect = 9e-23
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                        
Query: 240  tcagtcgatcaggcatgaccaaccacaagatcatgtgaacacagatgaagcgcttcttca 299
            ||||| ||||| |||||||||||||||||||||| | ||| |||| | ||||||||||||
Sbjct: 3395 tcagtagatcaagcatgaccaaccacaagatcatttaaacgcagaaggagcgcttcttca 3336

                                              
Query: 300  gcggaagtagacagacacaagcgggatgtcgaca 333
            |||||||||||| |||||||| ||||||||||||
Sbjct: 3335 gcggaagtagaccgacacaagtgggatgtcgaca 3302

>gb|BT019213.1| Zea mays clone Contig886.F mRNA sequence
          Length = 836

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 301 cggaagtagacagacacaagcgggatgtcgac 332
           |||||||| | |||||||||||||||||||||
Sbjct: 779 cggaagtaaatagacacaagcgggatgtcgac 748

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 181    tcagtaatgtggcttaagcccccactcagcttacag 216
              ||||||||||||||||| |||||||| || ||||||
Sbjct: 312039 tcagtaatgtggcttaaacccccacttagtttacag 312074

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 181    tcagtaatgtggcttaagcccccactcagcttacag 216
              ||||||||||||||||| |||||||| || ||||||
Sbjct: 294937 tcagtaatgtggcttaaacccccacttagtttacag 294972

>dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083B12, full
            insert sequence
          Length = 3724

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 181  tcagtaatgtggcttaagcccccactcagcttacag 216
            ||||||||||||||||| |||||||| || ||||||
Sbjct: 3580 tcagtaatgtggcttaaacccccacttagtttacag 3545

>dbj|AK111741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049I12, full
            insert sequence
          Length = 1533

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 181  tcagtaatgtggcttaagcccccactcagcttacag 216
            ||||||||||||||||| |||||||| || ||||||
Sbjct: 1473 tcagtaatgtggcttaaacccccacttagtttacag 1438

>dbj|AK104898.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C03, full
            insert sequence
          Length = 1510

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 181  tcagtaatgtggcttaagcccccactcagcttacag 216
            ||||||||||||||||| |||||||| || ||||||
Sbjct: 1364 tcagtaatgtggcttaaacccccacttagtttacag 1329

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 181    tcagtaatgtggcttaagcccccactcagcttacag 216
              ||||||||||||||||| |||||||| || ||||||
Sbjct: 294937 tcagtaatgtggcttaaacccccacttagtttacag 294972

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 181    tcagtaatgtggcttaagcccccactcagcttacag 216
              ||||||||||||||||| |||||||| || ||||||
Sbjct: 312039 tcagtaatgtggcttaaacccccacttagtttacag 312074

>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 181   tcagtaatgtggcttaagcccccactcagcttacag 216
             ||||||||||||||||| |||||||| || ||||||
Sbjct: 10056 tcagtaatgtggcttaaacccccacttagtttacag 10021

>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 181   tcagtaatgtggcttaagcccccactcagcttacag 216
             ||||||||||||||||| |||||||| || ||||||
Sbjct: 45090 tcagtaatgtggcttaaacccccacttagtttacag 45125

>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 164143

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 181  tcagtaatgtggcttaagcccccactcagcttacag 216
            ||||||||||||||||| |||||||| || ||||||
Sbjct: 2255 tcagtaatgtggcttaaacccccacttagtttacag 2290

>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 97      cttgtgaatcgtgatgtctg 116
               ||||||||||||||||||||
Sbjct: 2258336 cttgtgaatcgtgatgtctg 2258355

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 97      cttgtgaatcgtgatgtctg 116
               ||||||||||||||||||||
Sbjct: 2109514 cttgtgaatcgtgatgtctg 2109533

>emb|BX942828.16| Zebrafish DNA sequence from clone CH211-237F16 in linkage group 17,
             complete sequence
          Length = 125793

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ttttagcgaacaaacataaa 25
             ||||||||||||||||||||
Sbjct: 92307 ttttagcgaacaaacataaa 92288

>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 285     tgaagcgcttcttcagcgga 304
               ||||||||||||||||||||
Sbjct: 1983686 tgaagcgcttcttcagcgga 1983705

>gb|AC008125.9| Homo sapiens 12 BAC RPCI11-25E2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 189286

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 158    gagatggtagaaaggaaaat 177
              ||||||||||||||||||||
Sbjct: 153914 gagatggtagaaaggaaaat 153933

>emb|BX005055.5| Zebrafish DNA sequence from clone CH211-188N23 in linkage group 23,
             complete sequence
          Length = 156598

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    gaacaaacataaaacatgca 32
             ||||||||||||||||||||
Sbjct: 96241 gaacaaacataaaacatgca 96260

>emb|Z65094.1|HS19B9F H.sapiens CpG island DNA genomic Mse1 fragment, clone 19b9, forward
           read cpg19b9.ft1a
          Length = 264

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 167 gaaaggaaaatcagtcagta 186
           ||||||||||||||||||||
Sbjct: 169 gaaaggaaaatcagtcagta 188

>emb|CR847870.16| Zebrafish DNA sequence from clone DKEY-170G11 in linkage group 22,
              complete sequence
          Length = 237985

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     aacaaacataaaacatgcat 33
              ||||||||||||||||||||
Sbjct: 155174 aacaaacataaaacatgcat 155193

>emb|AM236324.1| Escherichia coli genome fragment containing the yersiniabactin, cob and
             pdu gene clusters, strain A0 34/86
          Length = 84189

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    cttgtgaatcgtgatgtctg 116
             ||||||||||||||||||||
Sbjct: 54791 cttgtgaatcgtgatgtctg 54810

>dbj|AB073314.1| Ciona intestinalis CiGi1 gene for G protein alpha subunit Gi splicing
            variants CiGi1a and CiGi1b, partial cds
          Length = 2192

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   gaacaaacataaaacatgca 32
            ||||||||||||||||||||
Sbjct: 1591 gaacaaacataaaacatgca 1572


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,601,572
Number of Sequences: 3902068
Number of extensions: 2601572
Number of successful extensions: 47749
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47632
Number of HSP's gapped (non-prelim): 113
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)