Clone Name	rbastl46g10
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor i...	494	e-136
2	gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor is...	440	e-120
3	emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon...	119	8e-24
4	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	119	8e-24
5	dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clon...	119	8e-24
6	dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clon...	119	8e-24
7	emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon...	119	8e-24
8	emb|AM156958.1| Oryza sativa (indica cultivar-group) mRNA for pu...	117	3e-23
9	emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for pu...	117	3e-23
10	emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic tr...	109	7e-21
11	gb|BT016928.1| Zea mays clone E04912703C02.c mRNA sequence	56	9e-05
12	gb|AY110434.1| Zea mays CL533_2 mRNA sequence	52	0.001
13	gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete se...	46	0.090
14	gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete s...	46	0.090
15	emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5...	44	0.36
16	emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chr...	44	0.36
17	gb|AY109824.1| Zea mays CL533_1 mRNA sequence	44	0.36
18	gb|AC026415.4| Homo sapiens chromosome 5 clone CTD-2046I8, compl...	42	1.4
19	gb|AC022127.4|AC022127 Homo sapiens chromosome 5 clone CTD-2151N...	42	1.4
20	gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosom...	40	5.6
21	gb|DP000012.1| Macropus eugenii target 1 genomic scaffold	40	5.6
22	gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, com...	40	5.6
23	gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome...	40	5.6
24	gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, c...	40	5.6
25	gb|AC124740.4| Mus musculus BAC clone RP23-356M1 from chromosome...	40	5.6
26	gb|AC123057.4| Mus musculus BAC clone RP23-184N6 from 3, complet...	40	5.6
27	gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's ...	40	5.6
28	emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on ch...	40	5.6
29	emb|AL354692.23| Human DNA sequence from clone RP11-361M4 on chr...	40	5.6
30	emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chr...	40	5.6
31	emb|AL050327.6|HSJ907D15 Human DNA sequence from clone RP5-907D1...	40	5.6
32	gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's...	40	5.6
33	emb|AL513464.1|NCB12K8 Neurospora crassa DNA linkage group V BAC...	40	5.6
34	emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo...	40	5.6
35	emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 ...	40	5.6
36	gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, comp...	40	5.6
37	dbj|AK135378.1| Mus musculus 12 days embryo female mullerian duc...	40	5.6
38	dbj|AK038355.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ...	40	5.6
39	gb|AC151548.3| Macropus eugenii clone ME_KBa-603H10, complete se...	40	5.6
40	gb|AC084664.1|CBRG47C14 Caenorhabditis briggsae cosmid G47C14, c...	40	5.6
41	dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome	40	5.6
42	emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chro...	40	5.6
43	gb|AC145041.3| Macropus eugenii clone ME_KBa-210M21, complete se...	40	5.6
44	emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in ...	40	5.6
45	emb|CT010479.25| Mouse DNA sequence from clone RP23-233G23 on ch...	40	5.6
46	emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-9...	40	5.6
47	gb|AC163101.9| Mus musculus chromosome 18, clone RP24-177G6, com...	40	5.6
48	gb|AC102618.19| Mus musculus chromosome 18, clone RP23-426G16, c...	40	5.6
49	gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, compl...	40	5.6

---

>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA,
            complete cds
          Length = 2887

 Score =  494 bits (249), Expect = e-136
 Identities = 283/293 (96%), Gaps = 1/293 (0%)
 Strand = Plus / Minus

                                                                        
Query: 123  gccttgttcactcccaggctccagcaagagttaggccgccgtcgccgagagaccaaaatc 182
            |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2696 gccttgttcattcccaggctccagcgagagttaggccgccgtcgccgagagaccaaaatc 2637

                                                                        
Query: 183  catggcttcttcctttcctccaaacaataatcaacactcatgtaacctcgcaaaaatata 242
            |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 2636 catggcttcttcctttcctcgaaacaataatcaacactcatgtgacctcgcaaaaatata 2577

                                                                        
Query: 243  cagctcaaaactggctgttgctcacatcccagttcctctgcggtgaaacacctaagctat 302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2576 cagctcaaaactggctgttgctcacatcccagttcctctgcggtgaaacacctaagctat 2517

                                                                        
Query: 303  agagaatacaccatacgctgcctttcactagacacagcacctgagaagttgagctggcca 362
            ||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||
Sbjct: 2516 agagaatacaccatacgctgtttttcactagacacagcacctgagaagttgagct-gcca 2458

                                                                 
Query: 363  agagctgttgtatcaagaggctgttgcacgcttcgactacggcagcatgtgag 415
            ||||||||| |||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 2457 agagctgttatatcgagaggctgttgcacgcgtcgactacggcagcatgtgag 2405



 Score =  200 bits (101), Expect = 3e-48
 Identities = 101/101 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gtaaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2810 gtaaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaa 2751

                                                     
Query: 61   agaaataataacattggaggagacacaaaaacatcccattt 101
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2750 agaaataataacattggaggagacacaaaaacatcccattt 2710

---

>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA
            sequence
          Length = 2863

 Score =  440 bits (222), Expect = e-120
 Identities = 279/294 (94%), Gaps = 3/294 (1%)
 Strand = Plus / Minus

                                                                        
Query: 123  gccttgttcactcccaggctccagcaagagttaggccgccgtcgcc-gagagaccaaaat 181
            |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 2693 gccttgttcattcccaggctccagcaagagttaggccgccgtcgccagagagaccaaa-t 2635

                                                                        
Query: 182  ccatggcttcttcctttcctccaaacaataatcaacactcatgtaacctcgcaaaaatat 241
            |||||||||||| || ||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 2634 ccatggcttctttctgtcctcgaaacaataatcaacactcatgtgacctcgcaaaaatat 2575

                                                                        
Query: 242  acagctcaaaactggctgttgctcacatcccagttcctctgcggtgaaacacctaagcta 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2574 acagctcaaaactggctgttgctcacatcccagttcctctgcggtgaaacacctaagcta 2515

                                                                        
Query: 302  tagagaatacaccatacgctgcctttcactagacacagcacctgagaagttgagctggcc 361
            |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||
Sbjct: 2514 tagagaatacaccatacgctgattttcactagacacagcacctgagaagttgagct-gcc 2456

                                                                  
Query: 362  aagagctgttgtatcaagaggctgttgcacgcttcgactacggcagcatgtgag 415
            |||||||||| |||| ||||||||||||| || |||||||| ||||||||||||
Sbjct: 2455 aagagctgttatatcgagaggctgttgcatgcgtcgactactgcagcatgtgag 2402



 Score =  204 bits (103), Expect = 2e-49
 Identities = 103/103 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    gtaaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2806 gtaaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaa 2747

                                                       
Query: 61   agaaataataacattggaggagacacaaaaacatcccatttga 103
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2746 agaaataataacattggaggagacacaaaaacatcccatttga 2704

---

>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score =  119 bits (60), Expect = 8e-24
 Identities = 129/154 (83%), Gaps = 16/154 (10%)
 Strand = Plus / Plus

                                                                         
Query: 176   caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 228
             |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 42261 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 42320

                                                                         
Query: 229   ctcgcaaaaatatacagctcaaaactggctgttgctcacatccc---------agttcct 279
             || ||||||||||||||| ||||||||||||||||||||||| |         |||||||
Sbjct: 42321 cttgcaaaaatatacagcacaaaactggctgttgctcacatctccagtacgagagttcct 42380

                                               
Query: 280   ctgcggtgaaacacctaagctatagagaatacac 313
             ||| ||||||||||||||||||||||||||||||
Sbjct: 42381 ctggggtgaaacacctaagctatagagaatacac 42414



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                         
Query: 3     aaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaag 62
             |||| ||||||||||||||||||| |||||||||||||||| |||||| | || ||||||
Sbjct: 42122 aaccaacagaatactccaaaaccatagtacattgttacaaaatgtgtacgcacagaaaag 42181

                      
Query: 63    aaataataa 71
             || ||||||
Sbjct: 42182 aactaataa 42190

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  119 bits (60), Expect = 8e-24
 Identities = 129/154 (83%), Gaps = 16/154 (10%)
 Strand = Plus / Plus

                                                                            
Query: 176      caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 228
                |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 24921676 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 24921735

                                                                            
Query: 229      ctcgcaaaaatatacagctcaaaactggctgttgctcacatccc---------agttcct 279
                || ||||||||||||||| ||||||||||||||||||||||| |         |||||||
Sbjct: 24921736 cttgcaaaaatatacagcacaaaactggctgttgctcacatctccagtacgagagttcct 24921795

                                                  
Query: 280      ctgcggtgaaacacctaagctatagagaatacac 313
                ||| ||||||||||||||||||||||||||||||
Sbjct: 24921796 ctggggtgaaacacctaagctatagagaatacac 24921829



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                            
Query: 3        aaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaag 62
                |||| ||||||||||||||||||| |||||||||||||||| |||||| | || ||||||
Sbjct: 24921537 aaccaacagaatactccaaaaccatagtacattgttacaaaatgtgtacgcacagaaaag 24921596

                         
Query: 63       aaataataa 71
                || ||||||
Sbjct: 24921597 aactaataa 24921605

---

>dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N14, full
            insert sequence
          Length = 2907

 Score =  119 bits (60), Expect = 8e-24
 Identities = 129/154 (83%), Gaps = 16/154 (10%)
 Strand = Plus / Minus

                                                                        
Query: 176  caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 228
            |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 2639 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 2580

                                                                        
Query: 229  ctcgcaaaaatatacagctcaaaactggctgttgctcacatccc---------agttcct 279
            || ||||||||||||||| ||||||||||||||||||||||| |         |||||||
Sbjct: 2579 cttgcaaaaatatacagcacaaaactggctgttgctcacatctccagtacgagagttcct 2520

                                              
Query: 280  ctgcggtgaaacacctaagctatagagaatacac 313
            ||| ||||||||||||||||||||||||||||||
Sbjct: 2519 ctggggtgaaacacctaagctatagagaatacac 2486



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                        
Query: 3    aaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaag 62
            |||| ||||||||||||||||||| |||||||||||||||| |||||| | || ||||||
Sbjct: 2778 aaccaacagaatactccaaaaccatagtacattgttacaaaatgtgtacgcacagaaaag 2719

                     
Query: 63   aaataataa 71
            || ||||||
Sbjct: 2718 aactaataa 2710

---

>dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A02, full
            insert sequence
          Length = 1712

 Score =  119 bits (60), Expect = 8e-24
 Identities = 129/154 (83%), Gaps = 16/154 (10%)
 Strand = Plus / Minus

                                                                        
Query: 176  caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 228
            |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 1545 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 1486

                                                                        
Query: 229  ctcgcaaaaatatacagctcaaaactggctgttgctcacatccc---------agttcct 279
            || ||||||||||||||| ||||||||||||||||||||||| |         |||||||
Sbjct: 1485 cttgcaaaaatatacagcacaaaactggctgttgctcacatctccagtacgagagttcct 1426

                                              
Query: 280  ctgcggtgaaacacctaagctatagagaatacac 313
            ||| ||||||||||||||||||||||||||||||
Sbjct: 1425 ctggggtgaaacacctaagctatagagaatacac 1392



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                        
Query: 3    aaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaag 62
            |||| ||||||||||||||||||| |||||||||||||||| |||||| | || ||||||
Sbjct: 1684 aaccaacagaatactccaaaaccatagtacattgttacaaaatgtgtacgcacagaaaag 1625

                     
Query: 63   aaataataa 71
            || ||||||
Sbjct: 1624 aactaataa 1616

---

>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score =  119 bits (60), Expect = 8e-24
 Identities = 129/154 (83%), Gaps = 16/154 (10%)
 Strand = Plus / Plus

                                                                         
Query: 176   caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 228
             |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 49790 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 49849

                                                                         
Query: 229   ctcgcaaaaatatacagctcaaaactggctgttgctcacatccc---------agttcct 279
             || ||||||||||||||| ||||||||||||||||||||||| |         |||||||
Sbjct: 49850 cttgcaaaaatatacagcacaaaactggctgttgctcacatctccagtacgagagttcct 49909

                                               
Query: 280   ctgcggtgaaacacctaagctatagagaatacac 313
             ||| ||||||||||||||||||||||||||||||
Sbjct: 49910 ctggggtgaaacacctaagctatagagaatacac 49943



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                         
Query: 3     aaccgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaag 62
             |||| ||||||||||||||||||| |||||||||||||||| |||||| | || ||||||
Sbjct: 49651 aaccaacagaatactccaaaaccatagtacattgttacaaaatgtgtacgcacagaaaag 49710

                      
Query: 63    aaataataa 71
             || ||||||
Sbjct: 49711 aactaataa 49719

---

>emb|AM156958.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic
            translation initiation factor 4 gamma (eif(iso)4g gene),
            cultivar Gigante
          Length = 2599

 Score =  117 bits (59), Expect = 3e-23
 Identities = 103/119 (86%), Gaps = 9/119 (7%)
 Strand = Plus / Minus

                                                                        
Query: 204  aaacaataatcaacactcatgtaacctcgcaaaaatatacagctcaaaactggctgttgc 263
            |||||||||| ||||||||| | |||| ||||||||||||||| ||||||||||||||||
Sbjct: 2572 aaacaataatgaacactcatctgaccttgcaaaaatatacagcacaaaactggctgttgc 2513

                                                                       
Query: 264  tcacatccc---------agttcctctgcggtgaaacacctaagctatagagaatacac 313
            ||||||| |         |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2512 tcacatctccagtacgagagttcctctggggtgaaacacctaagctatagagaatacac 2454

---

>emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic
            translation initiation factor 4 gamma (eif(iso)4g gene),
            cultivar IR64
          Length = 2599

 Score =  117 bits (59), Expect = 3e-23
 Identities = 128/153 (83%), Gaps = 16/153 (10%)
 Strand = Plus / Minus

                                                                        
Query: 177  aaaatccatggcttcttcctttcc-------tccaaacaataatcaacactcatgtaacc 229
            ||||||||||||||||| ||||||       || |||||||||| ||||||||| | |||
Sbjct: 2599 aaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgacc 2540

                                                                        
Query: 230  tcgcaaaaatatacagctcaaaactggctgttgctcacatccc---------agttcctc 280
            | ||||||||||||||| ||||||||||||||||||||||| |         ||||||||
Sbjct: 2539 ttgcaaaaatatacagcacaaaactggctgttgctcacatctccagtacgagagttcctc 2480

                                             
Query: 281  tgcggtgaaacacctaagctatagagaatacac 313
            || ||||||||||||||||||||||||||||||
Sbjct: 2479 tggggtgaaacacctaagctatagagaatacac 2447

---

>emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic translation initiation
            factor 4 gamma (eif(iso)4g gene), cultivar Tog5681
          Length = 2699

 Score =  109 bits (55), Expect = 7e-21
 Identities = 102/119 (85%), Gaps = 9/119 (7%)
 Strand = Plus / Minus

                                                                        
Query: 204  aaacaataatcaacactcatgtaacctcgcaaaaatatacagctcaaaactggctgttgc 263
            |||||||||  ||||||||| | |||| ||||||||||||||| ||||||||||||||||
Sbjct: 2666 aaacaataacgaacactcatctgaccttgcaaaaatatacagcacaaaactggctgttgc 2607

                                                                       
Query: 264  tcacatccc---------agttcctctgcggtgaaacacctaagctatagagaatacac 313
            ||||||| |         |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2606 tcacatctccagtacgagagttcctctggggtgaaacacctaagctatagagaatacac 2548

---

>gb|BT016928.1| Zea mays clone E04912703C02.c mRNA sequence
          Length = 249

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 215 aacactcatgtaacctcgcaaaaatatacagctcaaaactggctgttgctcacatc 270
           ||||||||| | | ||||||||| |||||||| |||||||||||||| ||| ||||
Sbjct: 132 aacactcatctgatctcgcaaaattatacagcccaaaactggctgttcctcgcatc 187



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 177 aaaatccatggcttcttcctttcc 200
           ||||||||||||||||| ||||||
Sbjct: 74  aaaatccatggcttctttctttcc 97

---

>gb|AY110434.1| Zea mays CL533_2 mRNA sequence
          Length = 843

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 229 ctcgcaaaaatatacagctcaaaactggctgttgctcacatc 270
           ||||||||| |||||||| |||||||||||||| ||| ||||
Sbjct: 600 ctcgcaaaattatacagcccaaaactggctgttcctcgcatc 559



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 177 aaaatccatggcttcttcctttcc 200
           ||||||||||||||||| ||||||
Sbjct: 672 aaaatccatggcttctttctttcc 649

---

>gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete sequence
          Length = 92346

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 86    caaaaacatcccatttgacagaagaag 112
             |||||||||||||||||| ||||||||
Sbjct: 45816 caaaaacatcccatttgagagaagaag 45842

---

>gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete sequence
          Length = 105045

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 86    caaaaacatcccatttgacagaagaag 112
             |||||||||||||||||| ||||||||
Sbjct: 28363 caaaaacatcccatttgagagaagaag 28337

---

>emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5 on chromosome X, complete
            sequence
          Length = 39550

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 50   aagaactgaaaagaaataataacatt 75
            |||| |||||||||||||||||||||
Sbjct: 3229 aagagctgaaaagaaataataacatt 3204

---

>emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chromosome 13q21.33-22.3
             Contains a signal sequence receptor, alpha
             (translocon-associated protein alpha) (SSR1) pseudogene,
             complete sequence
          Length = 151603

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 133   ctcccaggctccagcaagagtt 154
             ||||||||||||||||||||||
Sbjct: 87108 ctcccaggctccagcaagagtt 87087

---

>gb|AY109824.1| Zea mays CL533_1 mRNA sequence
          Length = 2894

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 229  ctcgcaaaaatatacagctcaaaactggctgttgctca 266
            ||||||||| |||||||||||||| || ||||| ||||
Sbjct: 2656 ctcgcaaaattatacagctcaaaattgtctgttcctca 2619

---

>gb|AC026415.4| Homo sapiens chromosome 5 clone CTD-2046I8, complete sequence
          Length = 67124

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 134  tcccaggctccagcaagagtt 154
            |||||||||||||||||||||
Sbjct: 3598 tcccaggctccagcaagagtt 3618

---

>gb|AC022127.4|AC022127 Homo sapiens chromosome 5 clone CTD-2151N11, complete sequence
          Length = 83029

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 134   tcccaggctccagcaagagtt 154
             |||||||||||||||||||||
Sbjct: 34025 tcccaggctccagcaagagtt 34005

---

>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence
          Length = 153426

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    gaaaagaaataataacattg 76
             ||||||||||||||||||||
Sbjct: 39323 gaaaagaaataataacattg 39342

---

>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 261     tgctcacatcccagttcctc 280
               ||||||||||||||||||||
Sbjct: 1171605 tgctcacatcccagttcctc 1171586

---

>gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, complete sequence
          Length = 186062

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     aaattgtgtaagaactgaaa 60
              ||||||||||||||||||||
Sbjct: 107485 aaattgtgtaagaactgaaa 107504

---

>gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome 13, complete sequence
          Length = 205869

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   ccatggcttcttcctttcct 201
             ||||||||||||||||||||
Sbjct: 31484 ccatggcttcttcctttcct 31503

---

>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence
          Length = 192584

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 37     ttacaaattgtgtaagaactgaaaagaaataa 68
              |||||||| || ||||||||||||| ||||||
Sbjct: 132634 ttacaaatagtttaagaactgaaaataaataa 132665

---

>gb|AC124740.4| Mus musculus BAC clone RP23-356M1 from chromosome 18, complete sequence
          Length = 190023

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   cccaggctccagcaagagtt 154
             ||||||||||||||||||||
Sbjct: 97827 cccaggctccagcaagagtt 97808

---

>gb|AC123057.4| Mus musculus BAC clone RP23-184N6 from 3, complete sequence
          Length = 223068

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 332    agacacagcacctgagaagttgagctgg 359
              ||||||||||| |||||||| |||||||
Sbjct: 125032 agacacagcacttgagaagtagagctgg 125059

---

>gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 170859

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    tgaaaagaaataataacatt 75
             ||||||||||||||||||||
Sbjct: 30825 tgaaaagaaataataacatt 30844

---

>emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on chromosome 9,
          complete sequence
          Length = 164559

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 44 ttgtgtaagaactgaaaagaaata 67
          |||||||||||||||||| |||||
Sbjct: 55 ttgtgtaagaactgaaaaaaaata 32

---

>emb|AL354692.23| Human DNA sequence from clone RP11-361M4 on chromosome 9 Contains a
             novel pseudogene, complete sequence
          Length = 110443

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   caaaaatatacagctcaaaa 252
             ||||||||||||||||||||
Sbjct: 35208 caaaaatatacagctcaaaa 35189

---

>emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chromosome 9 Contains the 3'
              end of a novel gene, and a novel pseudogene, complete
              sequence
          Length = 131366

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 44     ttgtgtaagaactgaaaagaaata 67
              |||||||||||||||||| |||||
Sbjct: 129421 ttgtgtaagaactgaaaaaaaata 129398

---

>emb|AL050327.6|HSJ907D15 Human DNA sequence from clone RP5-907D15 on chromosome 20q13.2-13.33
             Contains the 5' end of the STX16 gene for syntaxin 16, the
             3' end of a novel gene (LOC149773) and a CpG island,
             complete sequence
          Length = 123368

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   ttcactcccaggctccagca 148
             ||||||||||||||||||||
Sbjct: 44722 ttcactcccaggctccagca 44741

---

>gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 211584

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    tgaaaagaaataataacatt 75
             ||||||||||||||||||||
Sbjct: 41625 tgaaaagaaataataacatt 41606

---

>emb|AL513464.1|NCB12K8 Neurospora crassa DNA linkage group V BAC clone B12K8
          Length = 67453

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 345   gagaagttgagctggccaagagct 368
             |||||||||||||||| |||||||
Sbjct: 38022 gagaagttgagctggcgaagagct 38045

---

>emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo-8-phosphate synthase, exons
           1-4
          Length = 1812

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 49  taagaactgaaaagaaataa 68
           ||||||||||||||||||||
Sbjct: 639 taagaactgaaaagaaataa 620

---

>emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 in linkage group 20,
             complete sequence
          Length = 86384

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    tgaaaagaaataataacatt 75
             ||||||||||||||||||||
Sbjct: 84744 tgaaaagaaataataacatt 84763

---

>gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, complete sequence
          Length = 96678

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    acaaattgtgtaagaactga 58
             ||||||||||||||||||||
Sbjct: 56401 acaaattgtgtaagaactga 56382

---

>dbj|AK135378.1| Mus musculus 12 days embryo female mullerian duct includes
            surrounding region cDNA, RIKEN full-length enriched
            library, clone:6820409O14 product:unclassifiable, full
            insert sequence
          Length = 3242

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 243  cagctcaaaactggctgttg 262
            ||||||||||||||||||||
Sbjct: 2547 cagctcaaaactggctgttg 2566

---

>dbj|AK038355.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130097D18
           product:unclassifiable, full insert sequence
          Length = 719

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 135 cccaggctccagcaagagtt 154
           ||||||||||||||||||||
Sbjct: 28  cccaggctccagcaagagtt 9

---

>gb|AC151548.3| Macropus eugenii clone ME_KBa-603H10, complete sequence
          Length = 111549

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    tgctcacatcccagttcctc 280
              ||||||||||||||||||||
Sbjct: 108918 tgctcacatcccagttcctc 108899

---

>gb|AC084664.1|CBRG47C14 Caenorhabditis briggsae cosmid G47C14, complete sequence
          Length = 41476

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   gtgtaagaactgaaaagaaa 65
            ||||||||||||||||||||
Sbjct: 5836 gtgtaagaactgaaaagaaa 5855

---

>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome
          Length = 860631

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 49     taagaactgaaaagaaataataac 72
              |||||||| |||||||||||||||
Sbjct: 183747 taagaacttaaaagaaataataac 183724

---

>emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chromosome 2, complete
             sequence
          Length = 159731

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    gaaaagaaataataacattg 76
             ||||||||||||||||||||
Sbjct: 65829 gaaaagaaataataacattg 65810

---

>gb|AC145041.3| Macropus eugenii clone ME_KBa-210M21, complete sequence
          Length = 137667

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  tgctcacatcccagttcctc 280
            ||||||||||||||||||||
Sbjct: 1230 tgctcacatcccagttcctc 1211

---

>emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in linkage group 20,
           complete sequence
          Length = 9831

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  tgaaaagaaataataacatt 75
           ||||||||||||||||||||
Sbjct: 360 tgaaaagaaataataacatt 379

---

>emb|CT010479.25| Mouse DNA sequence from clone RP23-233G23 on chromosome 17, complete
              sequence
          Length = 203311

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    gctcaaaactggctgttgct 264
              ||||||||||||||||||||
Sbjct: 133196 gctcaaaactggctgttgct 133215

---

>emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-99L13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178433

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    taacattggaggagacacaaaaac 92
             ||||||||||||||||||| ||||
Sbjct: 93093 taacattggaggagacacataaac 93116

---

>gb|AC163101.9| Mus musculus chromosome 18, clone RP24-177G6, complete sequence
          Length = 154555

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    cagctcaaaactggctgttg 262
              ||||||||||||||||||||
Sbjct: 125944 cagctcaaaactggctgttg 125963

---

>gb|AC102618.19| Mus musculus chromosome 18, clone RP23-426G16, complete sequence
          Length = 242449

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   cagctcaaaactggctgttg 262
             ||||||||||||||||||||
Sbjct: 68402 cagctcaaaactggctgttg 68421

---

>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   gaaaagaaataataacattg 76
            ||||||||||||||||||||
Sbjct: 7379 gaaaagaaataataacattg 7360


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,398,860
Number of Sequences: 3902068
Number of extensions: 4398860
Number of successful extensions: 95414
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95249
Number of HSP's gapped (non-prelim): 162
length of query: 415
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 393
effective length of database: 17,147,199,772
effective search space: 6738849510396
effective search space used: 6738849510396
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---